RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 PTPN22Q9Y2R2 807 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 EMID1Q96A84 441 aaPredicted RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 ABHD17AQ96GS6 310 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 ANKRD26Q9UPS8 1709 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 IFRD1O00458 451 aaPredicted RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 LMOD1P29536 600 aaPredicted RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 MMP16P51512 607 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 NR1H3Q13133 447 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 NR6A1Q15406 480 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 ANKMY2Q8IV38 441 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 SLF2Q8IX21 1173 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 MRPL42Q9Y6G3 142 aaKnown RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 WASHC2CQ9Y4E1 1318 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 PRPF40AO75400 957 aaKnown RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 CTHP32929 405 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 XPCQ01831 940 aaPredicted RBP2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 GUCA2AQ02747 115 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 SLAIN1Q8ND83 568 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 SHDQ96IW2 340 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 PHF12Q96QT6 1004 aa2.82□□□□□ -1.96
SMARCAD1-202ENST00000359052 USP17L5A8MUK1 530 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZFPM1Q8IX07 1006 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 LRRC3Q9BY71 257 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 TKFCQ3LXA3 575 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 FAM43BQ6ZT52 329 aaPredicted RBP2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 CEP170BQ9Y4F5 1589 aaPredicted RBP2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 IQGAP3Q86VI3 1631 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 DACT2Q5SW24 774 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 SCYL1Q96KG9 808 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 OSBPL7Q9BZF2 842 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 OSBPL2Q9H1P3 480 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 IFT57Q9NWB7 429 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 STRCP1A6NGW2 1772 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 MAP3K1Q13233 1512 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZBTB39O15060 712 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 IRX6P78412 446 aaPredicted RBP2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 CREB3L3Q68CJ9 461 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 CCDC113Q9H0I3 377 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 RGS17Q9UGC6 210 aaPredicted RBP2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 PRR12Q9ULL5 1215 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 WRNQ14191 1432 aaPredicted RBP eCLIP2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 IFT140Q96RY7 1462 aa2.81□□□□□ -1.96
SMARCAD1-202ENST00000359052 RFPL3O75679 317 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 CCSAPQ6IQ19 270 aaPredicted RBP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 KRI1Q8N9T8 703 aaKnown RBP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 DHX38Q92620 1227 aaKnown RBP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 ASPSCR1Q9BZE9 553 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 GEMIN8Q9NWZ8 242 aaKnown RBP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 BOLA1Q9Y3E2 137 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 A0A1B0GVC2 190 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 MASP1P48740 699 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 EXOSC10Q01780 885 aaKnown RBP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 CHADLQ6NUI6 762 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 CDCA7LQ96GN5 454 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 WWC3Q9ULE0 1092 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 PCDHGA4Q9Y5G9 962 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 MADDQ8WXG6 1647 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 ADCY3O60266 1144 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 RHBDL3P58872 404 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 TRMT44Q8IYL2 757 aaKnown RBP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 RTFDC1Q9BY42 306 aaPredicted RBP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 ARAP1Q96P48 1450 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 FANCD2Q9BXW9 1451 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 KIDINS220Q9ULH0 1771 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 E9PCH4 1651 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 MDFIQ99750 246 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 SAP130Q9H0E3 1048 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 PARP2Q9UGN5 583 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 AK5Q9Y6K8 562 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 TUBGCP6Q96RT7 1819 aa2.8□□□□□ -1.96
SMARCAD1-202ENST00000359052 KRT85P78386 507 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 MORN1Q5T089 497 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 RC3H1Q5TC82 1133 aaKnown RBP2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 TRIM8Q9BZR9 551 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 BCL2L12Q9HB09 334 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 TERF2IPQ9NYB0 399 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZNF281Q9Y2X9 895 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 RFPL1O75677 317 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZNF394Q53GI3 561 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 PDXDC1Q6P996 788 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 NT5DC4Q86YG4 428 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 PGBD3Q8N328 593 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 EIF2AK4Q9P2K8 1649 aaKnown RBP2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 KCNH2Q12809 1159 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 DIXDC1Q155Q3 683 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 NYAP1Q6ZVC0 841 aa2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 C2orf49Q9BVC5 232 aaPredicted RBP2.79□□□□□ -1.96
SMARCAD1-202ENST00000359052 USP2O75604 605 aaPredicted RBP2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 APBA3O96018 575 aa2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 RXRGP48443 463 aa2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 ZNF280AP59817 542 aaPredicted RBP2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 APBB1IPQ7Z5R6 666 aaPredicted RBP2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 NKAPQ8N5F7 415 aaKnown RBP2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 PRR36Q9H6K5 1346 aa2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 FAM221AA4D161 298 aa2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 ANKRD62A6NC57 917 aa2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 ABLIM3O94929 683 aa2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 PRR29P0C7W0 189 aa2.78□□□□□ -1.96
SMARCAD1-202ENST00000359052 TMC2Q8TDI7 906 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms