RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 RAB11FIP3O75154 756 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 TPD52L1Q16890 204 aaPredicted RBP9.13□□□□□ -0.95
CD46-204ENST00000357714 ANO6Q4KMQ2 910 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 TTC6Q86TZ1 520 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 RUFY2Q8WXA3 655 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 SH2B1Q9NRF2 756 aaPredicted RBP9.13□□□□□ -0.95
CD46-204ENST00000357714 SMTNL1A8MU46 457 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 ZKSCAN1P17029 563 aaPredicted RBP9.13□□□□□ -0.95
CD46-204ENST00000357714 LIG1P18858 919 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 PI4K2BQ8TCG2 481 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 KIF1BPQ96EK5 621 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 DACT1Q9NYF0 836 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 NRBP1Q9UHY1 535 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 MRVI1Q9Y6F6 885 aa9.13□□□□□ -0.95
CD46-204ENST00000357714 ADCK5Q3MIX3 580 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 PLCD3Q8N3E9 789 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 SSH3Q8TE77 659 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 CBX8Q9HC52 389 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 CPS1P31327 1500 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 NAA30Q147X3 362 aaPredicted RBP9.12□□□□□ -0.95
CD46-204ENST00000357714 VPS53Q5VIR6 699 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 KLHL34Q8N239 644 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 TMEM51Q9NW97 253 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 TFIP11Q9UBB9 837 aaKnown RBP9.12□□□□□ -0.95
CD46-204ENST00000357714 MAP3K19Q56UN5 1328 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 ME3Q16798 604 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 BICD2Q8TD16 824 aa9.12□□□□□ -0.95
CD46-204ENST00000357714 TTC21BQ7Z4L5 1316 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 PTH1RQ03431 593 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 ZSCAN25Q6NSZ9 544 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 SPATA32Q96LK8 384 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 CLIP2Q9UDT6 1046 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 PAXBP1Q9Y5B6 917 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 GLRX3O76003 335 aaKnown RBP9.11□□□□□ -0.95
CD46-204ENST00000357714 PDCP20941 246 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 ZNF165P49910 485 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 ZNF75DP51815 510 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 CDC37L1Q7L3B6 337 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 CTNNA3Q9UI47 895 aa9.11□□□□□ -0.95
CD46-204ENST00000357714 HDGFL1Q5TGJ6 251 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 SCAND2PQ9GZW5 306 aaPredicted RBP9.1□□□□□ -0.95
CD46-204ENST00000357714 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
CD46-204ENST00000357714 DNAJC25Q9H1X3 360 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 DDX19AQ9NUU7 478 aaKnown RBP9.1□□□□□ -0.95
CD46-204ENST00000357714 PPP6R1Q9UPN7 881 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 ARHGEF10O15013 1369 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 TMEM131LA2VDJ0 1609 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 GOLGA6L19H0YKK7 550 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 AMPHP49418 695 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 HSP90AB4PQ58FF6 505 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 CEP135Q66GS9 1140 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 CLASRPQ8N2M8 674 aaKnown RBP9.1□□□□□ -0.95
CD46-204ENST00000357714 TCEANC2Q96MN5 208 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 PHAXQ9H814 394 aaKnown RBP9.1□□□□□ -0.95
CD46-204ENST00000357714 ZSWIM6Q9HCJ5 1215 aa9.1□□□□□ -0.95
CD46-204ENST00000357714 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.09□□□□□ -0.95
CD46-204ENST00000357714 SYCP1Q15431 976 aa9.09□□□□□ -0.95
CD46-204ENST00000357714 TAF3Q5VWG9 929 aa9.09□□□□□ -0.95
CD46-204ENST00000357714 CACTINQ8WUQ7 758 aaKnown RBP9.09□□□□□ -0.95
CD46-204ENST00000357714 TPCN1Q9ULQ1 816 aa9.09□□□□□ -0.95
CD46-204ENST00000357714 NPHP3Q7Z494 1330 aa9.09□□□□□ -0.95
CD46-204ENST00000357714 PRR36Q9H6K5 1346 aa9.09□□□□□ -0.95
CD46-204ENST00000357714 NBPF7P0C2Y1 421 aaPredicted RBP9.09□□□□□ -0.95
CD46-204ENST00000357714 GABPB1Q06547 395 aaPredicted RBP9.09□□□□□ -0.95
CD46-204ENST00000357714 ST3GAL1Q11201 340 aa9.09□□□□□ -0.95
CD46-204ENST00000357714 TM6SF1Q9BZW5 370 aa9.09□□□□□ -0.95
CD46-204ENST00000357714 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.09□□□□□ -0.95
CD46-204ENST00000357714 DDX41Q9UJV9 622 aaKnown RBP9.09□□□□□ -0.95
CD46-204ENST00000357714 V9GYY5 206 aaPredicted RBP9.09□□□□□ -0.95
CD46-204ENST00000357714 ACEP12821 1306 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 MYO5BQ9ULV0 1848 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 IFIT2P09913 472 aaKnown RBP9.08□□□□□ -0.96
CD46-204ENST00000357714 STK3Q13188 491 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.08□□□□□ -0.96
CD46-204ENST00000357714 GPATCH3Q96I76 525 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 RBM8AQ9Y5S9 174 aaKnown RBP9.08□□□□□ -0.96
CD46-204ENST00000357714 DLC1Q96QB1 1528 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 ELP1O95163 1332 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 GNAT3A8MTJ3 354 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 CDK11BP21127 795 aaKnown RBP9.08□□□□□ -0.96
CD46-204ENST00000357714 POLA2Q14181 598 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 TDRD7Q8NHU6 1098 aaKnown RBP9.08□□□□□ -0.96
CD46-204ENST00000357714 PDIA4P13667 645 aaKnown RBP9.08□□□□□ -0.96
CD46-204ENST00000357714 PSMA5P28066 241 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 PTPN14Q15678 1187 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 CREB3L3Q68CJ9 461 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 BLOC1S2Q6QNY1 142 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 PLA2G4DQ86XP0 818 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 LEO1Q8WVC0 666 aaPredicted RBP9.08□□□□□ -0.96
CD46-204ENST00000357714 EYA1Q99502 592 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 CLSTN2Q9H4D0 955 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 ECHDC1Q9NTX5 307 aa9.08□□□□□ -0.96
CD46-204ENST00000357714 METP08581 1390 aa9.07□□□□□ -0.96
CD46-204ENST00000357714 TTC41PQ6P2S7 1318 aa9.07□□□□□ -0.96
CD46-204ENST00000357714 BECN2A8MW95 431 aa9.07□□□□□ -0.96
CD46-204ENST00000357714 NR1I2O75469 434 aa9.07□□□□□ -0.96
CD46-204ENST00000357714 TAF7Q15545 349 aaPredicted RBP9.07□□□□□ -0.96
CD46-204ENST00000357714 CCDC144BQ3MJ40 725 aa9.07□□□□□ -0.96
CD46-204ENST00000357714 LARP1Q6PKG0 1096 aaKnown RBP9.07□□□□□ -0.96
CD46-204ENST00000357714 FILIP1Q7Z7B0 1213 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms