RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 DCCP43146 1447 aa21.31■■□□□ 1
GYPC-202ENST00000356887 OS9Q13438 667 aaPredicted RBP21.31■■□□□ 1
GYPC-202ENST00000356887 CWC27Q6UX04 472 aaKnown RBP21.31■■□□□ 1
GYPC-202ENST00000356887 RPAP1Q9BWH6 1393 aaPredicted RBP21.31■■□□□ 1
GYPC-202ENST00000356887 MAP3K2Q9Y2U5 619 aa21.31■■□□□ 1
GYPC-202ENST00000356887 GIGYF1O75420 1035 aaPredicted RBP21.3■■□□□ 1
GYPC-202ENST00000356887 KSR2Q6VAB6 950 aa21.3■■□□□ 1
GYPC-202ENST00000356887 MSNP26038 577 aaKnown RBP21.3■■□□□ 1
GYPC-202ENST00000356887 AK2P54819 239 aa21.3■■□□□ 1
GYPC-202ENST00000356887 RUFY3Q7L099 469 aa21.3■■□□□ 1
GYPC-202ENST00000356887 USP48Q86UV5 1035 aa21.3■■□□□ 1
GYPC-202ENST00000356887 CLASRPQ8N2M8 674 aaKnown RBP21.3■■□□□ 1
GYPC-202ENST00000356887 SYAP1Q96A49 352 aaPredicted RBP21.3■■□□□ 1
GYPC-202ENST00000356887 ORAI2Q96SN7 254 aa21.3■■□□□ 1
GYPC-202ENST00000356887 LIMCH1Q9UPQ0 1083 aa21.3■■□□□ 1
GYPC-202ENST00000356887 C1orf167Q5SNV9 1468 aa21.29■■□□□ 1
GYPC-202ENST00000356887 GADD45BO75293 160 aaPredicted RBP21.29■■□□□ 1
GYPC-202ENST00000356887 ATF3P18847 181 aa21.29■■□□□ 1
GYPC-202ENST00000356887 PROSER3Q2NL68 480 aa21.29■■□□□ 1
GYPC-202ENST00000356887 C1orf141Q5JVX7 400 aa21.29■■□□□ 1
GYPC-202ENST00000356887 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
GYPC-202ENST00000356887 ARHGEF25Q86VW2 580 aa21.29■■□□□ 1
GYPC-202ENST00000356887 C9orf78Q9NZ63 289 aaPredicted RBP21.29■■□□□ 1
GYPC-202ENST00000356887 NOL7Q9UMY1 257 aaKnown RBP21.29■■□□□ 1
GYPC-202ENST00000356887 SPG7Q9UQ90 795 aa21.29■■□□□ 1
GYPC-202ENST00000356887 PXDNQ92626 1479 aa21.29■■□□□ 1
GYPC-202ENST00000356887 MST1RQ04912 1400 aa21.29■■□□□ 1
GYPC-202ENST00000356887 TMEM87AQ8NBN3 555 aa21.28■■□□□ 1
GYPC-202ENST00000356887 ECHDC1Q9NTX5 307 aa21.28■■□□□ 1
GYPC-202ENST00000356887 RRP9O43818 475 aaKnown RBP21.28■■□□□ 1
GYPC-202ENST00000356887 GCP02774 474 aa21.28■■□□□ 1
GYPC-202ENST00000356887 ERC1Q8IUD2 1116 aa21.28■■□□□ 1
GYPC-202ENST00000356887 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
GYPC-202ENST00000356887 HDAC5Q9UQL6 1122 aa21.28■■□□□ 1
GYPC-202ENST00000356887 TSPY26PQ9H489 355 aa21.27■■□□□ 1
GYPC-202ENST00000356887 GDPD2Q9HCC8 539 aa21.27■■□□□ 1
GYPC-202ENST00000356887 DIAPH3Q9NSV4 1193 aa21.27■■□□□ 1
GYPC-202ENST00000356887 KIF1AQ12756 1690 aa21.27■■□□□ 1
GYPC-202ENST00000356887 OFD1O75665 1012 aa21.27■□□□□ 0.99
GYPC-202ENST00000356887 FOXD4L6Q3SYB3 417 aaPredicted RBP21.27■□□□□ 0.99
GYPC-202ENST00000356887 FOXD4L3Q6VB84 417 aaPredicted RBP21.27■□□□□ 0.99
GYPC-202ENST00000356887 KCNB2Q92953 911 aa21.27■□□□□ 0.99
GYPC-202ENST00000356887 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.27■□□□□ 0.99
GYPC-202ENST00000356887 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.26■□□□□ 0.99
GYPC-202ENST00000356887 SLIT3O75094 1523 aa21.26■□□□□ 0.99
GYPC-202ENST00000356887 ZSCAN22P10073 491 aaPredicted RBP21.25■□□□□ 0.99
GYPC-202ENST00000356887 PTH1RQ03431 593 aa21.25■□□□□ 0.99
GYPC-202ENST00000356887 HYPKQ9NX55 129 aa21.25■□□□□ 0.99
GYPC-202ENST00000356887 PA2G4Q9UQ80 394 aaKnown RBP21.25■□□□□ 0.99
GYPC-202ENST00000356887 IFIT2P09913 472 aaKnown RBP21.25■□□□□ 0.99
GYPC-202ENST00000356887 CWF19L2Q2TBE0 894 aaKnown RBP21.25■□□□□ 0.99
GYPC-202ENST00000356887 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
GYPC-202ENST00000356887 GPATCH3Q96I76 525 aa21.25■□□□□ 0.99
GYPC-202ENST00000356887 UTYO14607 1347 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 PRAMEF22A3QJZ6 481 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 CASTP20810 708 aaKnown RBP21.24■□□□□ 0.99
GYPC-202ENST00000356887 TM6SF1Q9BZW5 370 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 ZNF500O60304 480 aaPredicted RBP21.24■□□□□ 0.99
GYPC-202ENST00000356887 PHF14O94880 888 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 SYT1P21579 422 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 CADPS2Q86UW7 1296 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 LINS1Q8NG48 757 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 EVI5LQ96CN4 794 aa21.24■□□□□ 0.99
GYPC-202ENST00000356887 LARP6Q9BRS8 491 aaKnown RBP21.24■□□□□ 0.99
GYPC-202ENST00000356887 TCHHQ07283 1943 aa21.23■□□□□ 0.99
GYPC-202ENST00000356887 STX6O43752 255 aa21.23■□□□□ 0.99
GYPC-202ENST00000356887 CPA1P15085 419 aa21.23■□□□□ 0.99
GYPC-202ENST00000356887 VPS53Q5VIR6 699 aa21.23■□□□□ 0.99
GYPC-202ENST00000356887 RNF214Q8ND24 703 aa21.23■□□□□ 0.99
GYPC-202ENST00000356887 KAZALD1Q96I82 304 aa21.23■□□□□ 0.99
GYPC-202ENST00000356887 SIPA1L3O60292 1781 aaPredicted RBP21.23■□□□□ 0.99
GYPC-202ENST00000356887 TPM2P07951 284 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 ZSWIM6Q9HCJ5 1215 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 SMC3Q9UQE7 1217 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 CNPY2Q9Y2B0 182 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 CAMTA1Q9Y6Y1 1673 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 GRM8O00222 908 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 AACSQ86V21 672 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 SUCLG2Q96I99 432 aa21.22■□□□□ 0.99
GYPC-202ENST00000356887 LARGE1O95461 756 aa21.21■□□□□ 0.99
GYPC-202ENST00000356887 MCM5P33992 734 aa21.21■□□□□ 0.99
GYPC-202ENST00000356887 NECTIN1Q15223 517 aa21.21■□□□□ 0.99
GYPC-202ENST00000356887 ADCK5Q3MIX3 580 aa21.21■□□□□ 0.99
GYPC-202ENST00000356887 PRPF40BQ6NWY9 871 aaKnown RBP21.21■□□□□ 0.99
GYPC-202ENST00000356887 DDX21Q9NR30 783 aaKnown RBP eCLIP21.21■□□□□ 0.99
GYPC-202ENST00000356887 PDRG1Q9NUG6 133 aa21.21■□□□□ 0.99
GYPC-202ENST00000356887 CCDC39Q9UFE4 941 aa21.21■□□□□ 0.99
GYPC-202ENST00000356887 ZKSCAN5Q9Y2L8 839 aa21.21■□□□□ 0.99
GYPC-202ENST00000356887 SASH1O94885 1247 aa21.2■□□□□ 0.99
GYPC-202ENST00000356887 F13A1P00488 732 aa21.2■□□□□ 0.99
GYPC-202ENST00000356887 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.2■□□□□ 0.99
GYPC-202ENST00000356887 ZSCAN31Q96LW9 406 aaPredicted RBP21.2■□□□□ 0.99
GYPC-202ENST00000356887 JAKMIP1Q96N16 626 aaKnown RBP21.2■□□□□ 0.99
GYPC-202ENST00000356887 DDX58O95786 925 aaKnown RBP21.2■□□□□ 0.98
GYPC-202ENST00000356887 XPCQ01831 940 aaPredicted RBP21.2■□□□□ 0.98
GYPC-202ENST00000356887 PDIA6Q15084 440 aa21.2■□□□□ 0.98
GYPC-202ENST00000356887 ADAMTS7Q9UKP4 1686 aa21.2■□□□□ 0.98
GYPC-202ENST00000356887 TRPM3Q9HCF6 1732 aaPredicted RBP21.2■□□□□ 0.98
GYPC-202ENST00000356887 BICC1Q9H694 974 aaKnown RBP21.19■□□□□ 0.98
GYPC-202ENST00000356887 AXIN2Q9Y2T1 843 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms