RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 K7ELQ4 463 aaPredicted RBP19.85■□□□□ 0.77
COL27A1-201ENST00000356083 SYCE3A1L190 88 aa19.85■□□□□ 0.77
COL27A1-201ENST00000356083 BIN1O00499 593 aa19.85■□□□□ 0.77
COL27A1-201ENST00000356083 IFIT5Q13325 482 aaKnown RBP19.85■□□□□ 0.77
COL27A1-201ENST00000356083 IQCGQ9H095 443 aaKnown RBP19.85■□□□□ 0.77
COL27A1-201ENST00000356083 MAP3K12Q12852 859 aa19.85■□□□□ 0.77
COL27A1-201ENST00000356083 TCHPQ9BT92 498 aa19.85■□□□□ 0.77
COL27A1-201ENST00000356083 CTR9Q6PD62 1173 aa19.85■□□□□ 0.77
COL27A1-201ENST00000356083 CDCA7LQ96GN5 454 aa19.85■□□□□ 0.77
COL27A1-201ENST00000356083 PFDN4Q9NQP4 134 aa19.85■□□□□ 0.77
COL27A1-201ENST00000356083 EXOC6BQ9Y2D4 811 aa19.84■□□□□ 0.77
COL27A1-201ENST00000356083 AKAP2Q9Y2D5 859 aa19.84■□□□□ 0.77
COL27A1-201ENST00000356083 ATF7IPQ6VMQ6 1270 aa19.84■□□□□ 0.77
COL27A1-201ENST00000356083 GSTA5Q7RTV2 222 aa19.84■□□□□ 0.77
COL27A1-201ENST00000356083 ZNF526Q8TF50 670 aaPredicted RBP19.84■□□□□ 0.77
COL27A1-201ENST00000356083 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
COL27A1-201ENST00000356083 TRMT112Q9UI30 125 aaKnown RBP19.84■□□□□ 0.77
COL27A1-201ENST00000356083 SFPQP23246 707 aaKnown RBP eCLIP19.84■□□□□ 0.778e-9■■■■■ 27.5
COL27A1-201ENST00000356083 GEN1Q17RS7 908 aa19.84■□□□□ 0.77
COL27A1-201ENST00000356083 SLF2Q8IX21 1173 aa19.84■□□□□ 0.77
COL27A1-201ENST00000356083 TTC21AQ8NDW8 1320 aa19.83■□□□□ 0.77
COL27A1-201ENST00000356083 KRT32Q14532 448 aa19.83■□□□□ 0.77
COL27A1-201ENST00000356083 TSPY2A6NKD2 308 aa19.83■□□□□ 0.77
COL27A1-201ENST00000356083 CCDC196A0A1B0GTZ2 297 aa19.83■□□□□ 0.76
COL27A1-201ENST00000356083 RFC4P35249 363 aa19.83■□□□□ 0.76
COL27A1-201ENST00000356083 GCC1Q96CN9 775 aa19.83■□□□□ 0.76
COL27A1-201ENST00000356083 NAP1L3Q99457 506 aaPredicted RBP19.83■□□□□ 0.76
COL27A1-201ENST00000356083 ZSWIM4Q9H7M6 989 aa19.83■□□□□ 0.76
COL27A1-201ENST00000356083 VPS8Q8N3P4 1428 aa19.83■□□□□ 0.76
COL27A1-201ENST00000356083 RAB11FIP4Q86YS3 637 aa19.83■□□□□ 0.76
COL27A1-201ENST00000356083 SLC5A1P13866 664 aa19.82■□□□□ 0.76
COL27A1-201ENST00000356083 NCBP1Q09161 790 aaKnown RBP19.82■□□□□ 0.76
COL27A1-201ENST00000356083 TCP11L1Q9NUJ3 509 aa19.82■□□□□ 0.76
COL27A1-201ENST00000356083 PPP2R5CQ13362 524 aa19.82■□□□□ 0.76
COL27A1-201ENST00000356083 CABP1Q9NZU7 370 aa19.82■□□□□ 0.76
COL27A1-201ENST00000356083 TBC1D5Q92609 795 aa19.82■□□□□ 0.76
COL27A1-201ENST00000356083 EPSTI1Q96J88 318 aa19.82■□□□□ 0.76
COL27A1-201ENST00000356083 SP4Q02446 784 aa19.81■□□□□ 0.76
COL27A1-201ENST00000356083 ZBTB21Q9ULJ3 1066 aa19.81■□□□□ 0.76
COL27A1-201ENST00000356083 MRVI1Q9Y6F6 885 aa19.81■□□□□ 0.76
COL27A1-201ENST00000356083 ARID5AQ03989 594 aa19.81■□□□□ 0.76
COL27A1-201ENST00000356083 STX8Q9UNK0 236 aa19.81■□□□□ 0.76
COL27A1-201ENST00000356083 EEF2P13639 858 aaKnown RBP19.8■□□□□ 0.76
COL27A1-201ENST00000356083 GBP3Q9H0R5 595 aa19.8■□□□□ 0.76
COL27A1-201ENST00000356083 ZBTB16Q05516 673 aa19.8■□□□□ 0.76
COL27A1-201ENST00000356083 IRX5P78411 483 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-201ENST00000356083 BBXQ8WY36 941 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-201ENST00000356083 PPP1R9BQ96SB3 815 aa19.8■□□□□ 0.76
COL27A1-201ENST00000356083 NAA15Q9BXJ9 866 aaKnown RBP19.8■□□□□ 0.76
COL27A1-201ENST00000356083 RNF216Q9NWF9 866 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-201ENST00000356083 KIAA0753Q2KHM9 967 aa19.8■□□□□ 0.76
COL27A1-201ENST00000356083 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
COL27A1-201ENST00000356083 SMARCA5O60264 1052 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-201ENST00000356083 CEP135Q66GS9 1140 aa19.8■□□□□ 0.76
COL27A1-201ENST00000356083 PTPRGP23470 1445 aa19.79■□□□□ 0.76
COL27A1-201ENST00000356083 STXBP4Q6ZWJ1 553 aa19.79■□□□□ 0.76
COL27A1-201ENST00000356083 CCDC8Q9H0W5 538 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-201ENST00000356083 GOLGA8BA8MQT2 603 aa19.79■□□□□ 0.76
COL27A1-201ENST00000356083 HLA-DOAP06340 250 aa19.79■□□□□ 0.76
COL27A1-201ENST00000356083 CCDC117Q8IWD4 279 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-201ENST00000356083 PDCL2Q8N4E4 241 aa19.79■□□□□ 0.76
COL27A1-201ENST00000356083 THEMISQ8N1K5 641 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-201ENST00000356083 TXNDC16Q9P2K2 825 aa19.79■□□□□ 0.76
COL27A1-201ENST00000356083 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
COL27A1-201ENST00000356083 MCM3P25205 808 aa19.78■□□□□ 0.76
COL27A1-201ENST00000356083 KIF18AQ8NI77 898 aa19.78■□□□□ 0.76
COL27A1-201ENST00000356083 GRPEL1Q9HAV7 217 aa19.78■□□□□ 0.76
COL27A1-201ENST00000356083 HSP90AA4PQ58FG1 418 aa19.78■□□□□ 0.76
COL27A1-201ENST00000356083 KAT14Q9H8E8 782 aa19.78■□□□□ 0.76
COL27A1-201ENST00000356083 ZSCAN12O43309 604 aa19.78■□□□□ 0.76
COL27A1-201ENST00000356083 PLCB3Q01970 1234 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 SPECC1LQ69YQ0 1117 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 YEATS4O95619 227 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 RASA3Q14644 834 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 CCDC65Q8IXS2 484 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 CCDC50Q8IVM0 306 aa19.77■□□□□ 0.76
COL27A1-201ENST00000356083 KRT13P13646 458 aa19.77■□□□□ 0.75
COL27A1-201ENST00000356083 DDX46Q7L014 1031 aaKnown RBP19.77■□□□□ 0.75
COL27A1-201ENST00000356083 HAND2P61296 217 aa19.77■□□□□ 0.75
COL27A1-201ENST00000356083 AMPD3Q01432 767 aa19.77■□□□□ 0.75
COL27A1-201ENST00000356083 MICALCLQ6ZW33 695 aa19.77■□□□□ 0.75
COL27A1-201ENST00000356083 ZNF408Q9H9D4 720 aa19.77■□□□□ 0.75
COL27A1-201ENST00000356083 VEZTQ9HBM0 779 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 CALM1P0DP23 149 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 CALM2P0DP24 149 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 CALM3P0DP25 149 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 UBA7P41226 1012 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 PICALMQ13492 652 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 ARHGAP5Q13017 1502 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 PRPF40BQ6NWY9 871 aaKnown RBP19.76■□□□□ 0.75
COL27A1-201ENST00000356083 SLC12A5Q9H2X9 1139 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 SMIM23A6NLE4 172 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 PRPF31Q8WWY3 499 aaKnown RBP19.76■□□□□ 0.75
COL27A1-201ENST00000356083 JARID2Q92833 1246 aaPredicted RBP19.76■□□□□ 0.75
COL27A1-201ENST00000356083 CFAP70Q5T0N1 1121 aa19.76■□□□□ 0.75
COL27A1-201ENST00000356083 GABPAQ06546 454 aa19.75■□□□□ 0.75
COL27A1-201ENST00000356083 GOLGA8AA7E2F4 631 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms