RNA–Protein interactions for RNA: ENST00000355081.3

KLHL28-201, Transcript of kelch like family member 28, humanhuman

TSL 1 (best) BASIC

Gene KLHL28, Length 2,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-201ENST00000355081 SSH3Q8TE77 659 aa6.52□□□□□ -1.37
KLHL28-201ENST00000355081 NUDT16Q96DE0 195 aaKnown RBP6.52□□□□□ -1.37
KLHL28-201ENST00000355081 ZSCAN31Q96LW9 406 aaPredicted RBP6.52□□□□□ -1.37
KLHL28-201ENST00000355081 TRIM5Q9C035 493 aa6.52□□□□□ -1.37
KLHL28-201ENST00000355081 SPG7Q9UQ90 795 aa6.52□□□□□ -1.37
KLHL28-201ENST00000355081 CHMP3Q9Y3E7 222 aa6.52□□□□□ -1.37
KLHL28-201ENST00000355081 AKAP12Q02952 1782 aa6.52□□□□□ -1.37
KLHL28-201ENST00000355081 CRYBG1Q9Y4K1 1723 aa6.52□□□□□ -1.37
KLHL28-201ENST00000355081 CCDC171Q6TFL3 1326 aa6.52□□□□□ -1.37
KLHL28-201ENST00000355081 FOXO3O43524 673 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 RAB11FIP3O75154 756 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 UBTFL1P0CB47 393 aaPredicted RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 GTF2E1P29083 439 aaPredicted RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 KRT85P78386 507 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 ADCK5Q3MIX3 580 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 RBM43Q6ZSC3 357 aaKnown RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 CKAP2LQ8IYA6 745 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 TDRD7Q8NHU6 1098 aaKnown RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 BBXQ8WY36 941 aaPredicted RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 USP44Q9H0E7 712 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 TNMDQ9H2S6 317 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 ZSWIM6Q9HCJ5 1215 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 PDRG1Q9NUG6 133 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 DACT1Q9NYF0 836 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 CCDC61Q9Y6R9 512 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 ITSN1Q15811 1721 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 TTC21AQ8NDW8 1320 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 PEAK1Q9H792 1746 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 SURF6O75683 361 aaKnown RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 PDIA4P13667 645 aaKnown RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 POLA2Q14181 598 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 TERF2Q15554 542 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 ME3Q16798 604 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 TPD52L1Q16890 204 aaPredicted RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 HSP90AB2PQ58FF8 381 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 CCDC30Q5VVM6 783 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 FBXO31Q5XUX0 539 aaPredicted RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 CDC37L1Q7L3B6 337 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 RHPN1Q8TCX5 695 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 CACTINQ8WUQ7 758 aaKnown RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 JAKMIP1Q96N16 626 aaKnown RBP6.51□□□□□ -1.37
KLHL28-201ENST00000355081 TM6SF1Q9BZW5 370 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 TMEM51Q9NW97 253 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 CLIP2Q9UDT6 1046 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 CYP46A1Q9Y6A2 500 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 PXDNLA1KZ92 1463 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 SPATA31D1Q6ZQQ2 1576 aa6.51□□□□□ -1.37
KLHL28-201ENST00000355081 MAP3K5Q99683 1374 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 KMT5BQ4FZB7 885 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 LARP1BQ659C4 914 aaKnown RBP6.5□□□□□ -1.37
KLHL28-201ENST00000355081 CEP135Q66GS9 1140 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 PPP1R42Q7Z4L9 355 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 FERMT3Q86UX7 667 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 KRT222Q8N1A0 295 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 NECAB1Q8N987 351 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 KIF1BPQ96EK5 621 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 DDX19AQ9NUU7 478 aaKnown RBP6.5□□□□□ -1.37
KLHL28-201ENST00000355081 STAG3Q9UJ98 1225 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 MAP3K19Q56UN5 1328 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 NPHP3Q7Z494 1330 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 CACNA1FO60840 1977 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 RIMS1Q86UR5 1692 aaKnown RBP6.5□□□□□ -1.37
KLHL28-201ENST00000355081 CHD2O14647 1828 aaKnown RBP6.5□□□□□ -1.37
KLHL28-201ENST00000355081 CDC25BP30305 580 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 ZNF165P49910 485 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 PTH1RQ03431 593 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 CCDC144BQ3MJ40 725 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 PRPF40BQ6NWY9 871 aaKnown RBP6.5□□□□□ -1.37
KLHL28-201ENST00000355081 FAM173BQ6P4H8 233 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 CCDC144CPQ8IYA2 1237 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 ZNF397Q8NF99 534 aaPredicted RBP6.5□□□□□ -1.37
KLHL28-201ENST00000355081 ZNF592Q92610 1267 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 KCNB2Q92953 911 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 SCAND2PQ9GZW5 306 aaPredicted RBP6.5□□□□□ -1.37
KLHL28-201ENST00000355081 CLSTN2Q9H4D0 955 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 FAM53CQ9NYF3 392 aa6.5□□□□□ -1.37
KLHL28-201ENST00000355081 OVOS2A0A0J9YW53 1432 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 OVOS2Q6IE36 1432 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 TTC21BQ7Z4L5 1316 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 GOLGA6L4A6NEF3 574 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 USP27XA6NNY8 438 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 PDCP20941 246 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 RBM6P78332 1123 aaKnown RBP6.49□□□□□ -1.37
KLHL28-201ENST00000355081 NYAP1Q6ZVC0 841 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 LRRC8AQ8IWT6 810 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 RUFY2Q8WXA3 655 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 NECTIN2Q92692 538 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 SPATA32Q96LK8 384 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 DNAJC25Q9H1X3 360 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 ZNF215Q9UL58 517 aaPredicted RBP6.49□□□□□ -1.37
KLHL28-201ENST00000355081 TPCN1Q9ULQ1 816 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 ADGRL3Q9HAR2 1447 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 USP42Q9H9J4 1324 aaKnown RBP6.49□□□□□ -1.37
KLHL28-201ENST00000355081 NALCNQ8IZF0 1738 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 NEO1Q92859 1461 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 LRRC37A3O60309 1634 aa6.49□□□□□ -1.37
KLHL28-201ENST00000355081 CCDC66A2RUB6 948 aa6.48□□□□□ -1.37
KLHL28-201ENST00000355081 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
KLHL28-201ENST00000355081 NR1I2O75469 434 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms