RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
PRPF40A-201ENST00000354363 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
PRPF40A-201ENST00000354363 CLEC4GQ6UXB4 293 aa19.22■□□□□ 0.67
PRPF40A-201ENST00000354363 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
PRPF40A-201ENST00000354363 NPHP1O15259 732 aa19.21■□□□□ 0.67
PRPF40A-201ENST00000354363 ST5P78524 1137 aa19.21■□□□□ 0.67
PRPF40A-201ENST00000354363 C21orf2O43822 256 aa19.2■□□□□ 0.66
PRPF40A-201ENST00000354363 MIS18AQ9NYP9 233 aa19.2■□□□□ 0.66
PRPF40A-201ENST00000354363 ZNF219Q9P2Y4 722 aaPredicted RBP19.2■□□□□ 0.66
PRPF40A-201ENST00000354363 GLTPD2A6NH11 291 aa19.19■□□□□ 0.66
PRPF40A-201ENST00000354363 NEFMP07197 916 aa19.19■□□□□ 0.66
PRPF40A-201ENST00000354363 FSTL1Q12841 308 aa19.19■□□□□ 0.66
PRPF40A-201ENST00000354363 PLEKHF1Q96S99 279 aa19.19■□□□□ 0.66
PRPF40A-201ENST00000354363 ZNF652Q9Y2D9 606 aa19.19■□□□□ 0.66
PRPF40A-201ENST00000354363 NUP98P52948 1817 aa19.19■□□□□ 0.66
PRPF40A-201ENST00000354363 SRGNP10124 158 aa19.18■□□□□ 0.66
PRPF40A-201ENST00000354363 STYK1Q6J9G0 422 aa19.18■□□□□ 0.66
PRPF40A-201ENST00000354363 NBPF5PQ86XG9 351 aaPredicted RBP19.18■□□□□ 0.66
PRPF40A-201ENST00000354363 DNAJC5GQ8N7S2 189 aa19.18■□□□□ 0.66
PRPF40A-201ENST00000354363 CNKSR1Q969H4 720 aa19.18■□□□□ 0.66
PRPF40A-201ENST00000354363 RGL2O15211 777 aa19.17■□□□□ 0.66
PRPF40A-201ENST00000354363 MASTLQ96GX5 879 aa19.17■□□□□ 0.66
PRPF40A-201ENST00000354363 NFE2L2Q16236 605 aa19.16■□□□□ 0.66
PRPF40A-201ENST00000354363 PNISRQ8TF01 805 aaKnown RBP19.16■□□□□ 0.66
PRPF40A-201ENST00000354363 PRPF40BQ6NWY9 871 aaKnown RBP19.15■□□□□ 0.66
PRPF40A-201ENST00000354363 NIP7Q9Y221 180 aaKnown RBP eCLIP19.15■□□□□ 0.66
PRPF40A-201ENST00000354363 LTBP3Q9NS15 1303 aa19.15■□□□□ 0.66
PRPF40A-201ENST00000354363 VEGFAP15692 232 aaPredicted RBP19.14■□□□□ 0.66
PRPF40A-201ENST00000354363 HLFQ16534 295 aa19.14■□□□□ 0.65
PRPF40A-201ENST00000354363 SMC1BQ8NDV3 1235 aa19.14■□□□□ 0.65
PRPF40A-201ENST00000354363 THUMPD2Q9BTF0 503 aaKnown RBP19.14■□□□□ 0.65
PRPF40A-201ENST00000354363 TAOK3Q9H2K8 898 aa19.14■□□□□ 0.65
PRPF40A-201ENST00000354363 EIF4A1P60842 406 aaKnown RBP19.13■□□□□ 0.65
PRPF40A-201ENST00000354363 HTRA3P83110 453 aa19.13■□□□□ 0.65
PRPF40A-201ENST00000354363 ERFEQ4G0M1 354 aa19.13■□□□□ 0.65
PRPF40A-201ENST00000354363 TPTE2Q6XPS3 522 aa19.13■□□□□ 0.65
PRPF40A-201ENST00000354363 KLRG2A4D1S0 409 aaPredicted RBP19.12■□□□□ 0.65
PRPF40A-201ENST00000354363 SOGA3Q5TF21 947 aa19.12■□□□□ 0.65
PRPF40A-201ENST00000354363 PNNQ9H307 717 aaKnown RBP19.12■□□□□ 0.65
PRPF40A-201ENST00000354363 MAPK8IP3Q9UPT6 1336 aa19.12■□□□□ 0.65
PRPF40A-201ENST00000354363 FAM177BA6PVY3 158 aa19.11■□□□□ 0.65
PRPF40A-201ENST00000354363 POTECB2RU33 542 aa19.11■□□□□ 0.65
PRPF40A-201ENST00000354363 NPR1P16066 1061 aa19.11■□□□□ 0.65
PRPF40A-201ENST00000354363 DPY19L2Q6NUT2 758 aa19.11■□□□□ 0.65
PRPF40A-201ENST00000354363 IFFO2Q5TF58 517 aa19.11■□□□□ 0.65
PRPF40A-201ENST00000354363 NGEFQ8N5V2 710 aa19.11■□□□□ 0.65
PRPF40A-201ENST00000354363 C7orf43Q8WVR3 580 aa19.11■□□□□ 0.65
PRPF40A-201ENST00000354363 KLRG1Q96E93 195 aa19.09■□□□□ 0.65
PRPF40A-201ENST00000354363 RRP7AQ9Y3A4 280 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-201ENST00000354363 ERVV-1B6SEH8 477 aa19.08■□□□□ 0.65
PRPF40A-201ENST00000354363 RALBP1Q15311 655 aa19.08■□□□□ 0.65
PRPF40A-201ENST00000354363 MAP3K15Q6ZN16 1313 aa19.08■□□□□ 0.64
PRPF40A-201ENST00000354363 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
PRPF40A-201ENST00000354363 TTLL7Q6ZT98 887 aa19.07■□□□□ 0.64
PRPF40A-201ENST00000354363 MYL6BP14649 208 aa19.07■□□□□ 0.64
PRPF40A-201ENST00000354363 SCN4AP35499 1836 aa19.06■□□□□ 0.64
PRPF40A-201ENST00000354363 GTF2E1P29083 439 aaPredicted RBP19.06■□□□□ 0.64
PRPF40A-201ENST00000354363 KIF6Q6ZMV9 814 aa19.06■□□□□ 0.64
PRPF40A-201ENST00000354363 ABCC12Q96J65 1359 aa19.05■□□□□ 0.64
PRPF40A-201ENST00000354363 DDNO94850 711 aaPredicted RBP19.05■□□□□ 0.64
PRPF40A-201ENST00000354363 RIPK4P57078 832 aa19.05■□□□□ 0.64
PRPF40A-201ENST00000354363 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
PRPF40A-201ENST00000354363 NUTM1Q86Y26 1132 aa19.05■□□□□ 0.64
PRPF40A-201ENST00000354363 NYXQ9GZU5 481 aa19.05■□□□□ 0.64
PRPF40A-201ENST00000354363 TSPYL4Q9UJ04 414 aa19.05■□□□□ 0.64
PRPF40A-201ENST00000354363 FKBP4Q02790 459 aaKnown RBP eCLIP19.04■□□□□ 0.64
PRPF40A-201ENST00000354363 JMYQ8N9B5 988 aa19.04■□□□□ 0.64
PRPF40A-201ENST00000354363 ERBB4Q15303 1308 aa19.04■□□□□ 0.64
PRPF40A-201ENST00000354363 ALDH1B1P30837 517 aa19.03■□□□□ 0.64
PRPF40A-201ENST00000354363 ZBTB3Q9H5J0 574 aa19.03■□□□□ 0.64
PRPF40A-201ENST00000354363 UBN2Q6ZU65 1347 aa19.03■□□□□ 0.64
PRPF40A-201ENST00000354363 GPTP24298 496 aa19.03■□□□□ 0.64
PRPF40A-201ENST00000354363 CRY2Q49AN0 593 aa19.03■□□□□ 0.64
PRPF40A-201ENST00000354363 IBTKQ9P2D0 1353 aaPredicted RBP19.03■□□□□ 0.64
PRPF40A-201ENST00000354363 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
PRPF40A-201ENST00000354363 RTKN2Q8IZC4 609 aa19.02■□□□□ 0.64
PRPF40A-201ENST00000354363 ZNF277Q9NRM2 450 aaPredicted RBP19.02■□□□□ 0.64
PRPF40A-201ENST00000354363 RIC1Q4ADV7 1423 aa19.02■□□□□ 0.63
PRPF40A-201ENST00000354363 ANKRD36CQ5JPF3 1778 aa19.02■□□□□ 0.63
PRPF40A-201ENST00000354363 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
PRPF40A-201ENST00000354363 SUSD4Q5VX71 490 aa19.01■□□□□ 0.63
PRPF40A-201ENST00000354363 GIGYF2Q6Y7W6 1299 aaKnown RBP19.01■□□□□ 0.63
PRPF40A-201ENST00000354363 ZNF34Q8IZ26 560 aa19.01■□□□□ 0.63
PRPF40A-201ENST00000354363 BABAM1Q9NWV8 329 aa19.01■□□□□ 0.63
PRPF40A-201ENST00000354363 SNED1Q8TER0 1413 aa19■□□□□ 0.63
PRPF40A-201ENST00000354363 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
PRPF40A-201ENST00000354363 PDIA6Q15084 440 aa19■□□□□ 0.63
PRPF40A-201ENST00000354363 LRP10Q7Z4F1 713 aa19■□□□□ 0.63
PRPF40A-201ENST00000354363 POTEIP0CG38 1075 aa19■□□□□ 0.63
PRPF40A-201ENST00000354363 POTEJP0CG39 1038 aa19■□□□□ 0.63
PRPF40A-201ENST00000354363 EIF2S2P20042 333 aaKnown RBP19■□□□□ 0.63
PRPF40A-201ENST00000354363 LMOD3Q0VAK6 560 aa19■□□□□ 0.63
PRPF40A-201ENST00000354363 L3MBTL3Q96JM7 780 aaPredicted RBP19■□□□□ 0.63
PRPF40A-201ENST00000354363 ZNF541Q9H0D2 1346 aa18.99■□□□□ 0.63
PRPF40A-201ENST00000354363 NTSR2O95665 410 aa18.99■□□□□ 0.63
PRPF40A-201ENST00000354363 CHADLQ6NUI6 762 aa18.99■□□□□ 0.63
PRPF40A-201ENST00000354363 SYNE4Q8N205 404 aa18.99■□□□□ 0.63
PRPF40A-201ENST00000354363 HOXA10P31260 410 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-201ENST00000354363 IARSP41252 1262 aaKnown RBP18.98■□□□□ 0.63
PRPF40A-201ENST00000354363 PROSER3Q2NL68 480 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms