RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 SDSP20132 328 aa13.23□□□□□ -0.29
EPB41-203ENST00000349460 SLC39A6Q13433 755 aa13.23□□□□□ -0.29
EPB41-203ENST00000349460 RHPN1Q8TCX5 695 aa13.23□□□□□ -0.29
EPB41-203ENST00000349460 XAGE3Q8WTP9 111 aa13.23□□□□□ -0.29
EPB41-203ENST00000349460 BTG4Q9NY30 223 aa13.23□□□□□ -0.29
EPB41-203ENST00000349460 C9orf78Q9NZ63 289 aaPredicted RBP13.23□□□□□ -0.29
EPB41-203ENST00000349460 TOM1O60784 492 aa13.23□□□□□ -0.29
EPB41-203ENST00000349460 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
EPB41-203ENST00000349460 SRGAP3O43295 1099 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 SPATA31A1Q5TZJ5 1347 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 CASP7P55210 303 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 COPS6Q7L5N1 327 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 COPRSQ9NQ92 184 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
EPB41-203ENST00000349460 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
EPB41-203ENST00000349460 SPEF2Q9C093 1822 aa13.21□□□□□ -0.29
EPB41-203ENST00000349460 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
EPB41-203ENST00000349460 H7C1W4 665 aa13.21□□□□□ -0.3
EPB41-203ENST00000349460 ANAPC15P60006 121 aa13.21□□□□□ -0.3
EPB41-203ENST00000349460 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.3
EPB41-203ENST00000349460 MFAP1P55081 439 aaKnown RBP13.2□□□□□ -0.3
EPB41-203ENST00000349460 USP26Q9BXU7 913 aa13.2□□□□□ -0.3
EPB41-203ENST00000349460 EXOC6BQ9Y2D4 811 aa13.2□□□□□ -0.3
EPB41-203ENST00000349460 ERC2O15083 957 aa13.2□□□□□ -0.3
EPB41-203ENST00000349460 RABEP1Q15276 862 aa13.2□□□□□ -0.3
EPB41-203ENST00000349460 C16orf71Q8IYS4 520 aaPredicted RBP13.2□□□□□ -0.3
EPB41-203ENST00000349460 KIF2CQ99661 725 aa13.2□□□□□ -0.3
EPB41-203ENST00000349460 SPATA31A5Q5VU36 1347 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 SPATA31A7Q8IWB4 1347 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 PLA2G12BQ9BX93 195 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 ANTXR1Q9H6X2 564 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 CIZ1Q9ULV3 898 aaPredicted RBP13.19□□□□□ -0.3
EPB41-203ENST00000349460 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
EPB41-203ENST00000349460 NBPF14Q5TI25 921 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 NBPF10Q6P3W6 841 aaKnown RBP13.19□□□□□ -0.3
EPB41-203ENST00000349460 NBPF15Q8N660 670 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 PI4K2BQ8TCG2 481 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 GPATCH3Q96I76 525 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 GPR108Q9NPR9 543 aa13.19□□□□□ -0.3
EPB41-203ENST00000349460 GLRX3O76003 335 aaKnown RBP13.18□□□□□ -0.3
EPB41-203ENST00000349460 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
EPB41-203ENST00000349460 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
EPB41-203ENST00000349460 SNRKQ9NRH2 765 aa13.18□□□□□ -0.3
EPB41-203ENST00000349460 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
EPB41-203ENST00000349460 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
EPB41-203ENST00000349460 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
EPB41-203ENST00000349460 EXOC5O00471 708 aa13.18□□□□□ -0.3
EPB41-203ENST00000349460 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
EPB41-203ENST00000349460 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
EPB41-203ENST00000349460 LAMB2P55268 1798 aa13.17□□□□□ -0.3
EPB41-203ENST00000349460 STARD3NLO95772 234 aa13.17□□□□□ -0.3
EPB41-203ENST00000349460 ANXA1P04083 346 aa13.17□□□□□ -0.3
EPB41-203ENST00000349460 CLASRPQ8N2M8 674 aaKnown RBP13.17□□□□□ -0.3
EPB41-203ENST00000349460 JCADQ9P266 1359 aa13.17□□□□□ -0.3
EPB41-203ENST00000349460 DDIT3P35638 169 aa13.17□□□□□ -0.3
EPB41-203ENST00000349460 RFX5P48382 616 aaPredicted RBP13.17□□□□□ -0.3
EPB41-203ENST00000349460 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
EPB41-203ENST00000349460 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
EPB41-203ENST00000349460 PIGBQ92521 554 aa13.16□□□□□ -0.3
EPB41-203ENST00000349460 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
EPB41-203ENST00000349460 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
EPB41-203ENST00000349460 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
EPB41-203ENST00000349460 HIP1O00291 1037 aa13.16□□□□□ -0.3
EPB41-203ENST00000349460 AK7Q96M32 723 aa13.16□□□□□ -0.3
EPB41-203ENST00000349460 MYD88Q99836 296 aa13.16□□□□□ -0.3
EPB41-203ENST00000349460 CWC25Q9NXE8 425 aaPredicted RBP13.16□□□□□ -0.3
EPB41-203ENST00000349460 SPATA31A6Q5VVP1 1343 aa13.16□□□□□ -0.3
EPB41-203ENST00000349460 CHMLP26374 656 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 BCORQ6W2J9 1755 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 CIAO1O76071 339 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 RAD50Q92878 1312 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 CNTROBQ8N137 903 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
EPB41-203ENST00000349460 MYH3P11055 1940 aa13.14□□□□□ -0.31
EPB41-203ENST00000349460 LRP5O75197 1615 aa13.14□□□□□ -0.31
EPB41-203ENST00000349460 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
EPB41-203ENST00000349460 MYL6BP14649 208 aa13.14□□□□□ -0.31
EPB41-203ENST00000349460 MCM2P49736 904 aa13.14□□□□□ -0.31
EPB41-203ENST00000349460 G3BP1Q13283 466 aaKnown RBP eCLIP13.14□□□□□ -0.31
EPB41-203ENST00000349460 TCIRG1Q13488 830 aa13.14□□□□□ -0.31
EPB41-203ENST00000349460 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
EPB41-203ENST00000349460 NUP98P52948 1817 aa13.13□□□□□ -0.31
EPB41-203ENST00000349460 NHSQ6T4R5 1651 aa13.13□□□□□ -0.31
EPB41-203ENST00000349460 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
EPB41-203ENST00000349460 VPS72Q15906 364 aa13.13□□□□□ -0.31
EPB41-203ENST00000349460 MCCP23508 829 aa13.13□□□□□ -0.31
EPB41-203ENST00000349460 FOXO4P98177 505 aa13.13□□□□□ -0.31
EPB41-203ENST00000349460 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
EPB41-203ENST00000349460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
EPB41-203ENST00000349460 MAP3K15Q6ZN16 1313 aa13.12□□□□□ -0.31
EPB41-203ENST00000349460 ABCC12Q96J65 1359 aa13.12□□□□□ -0.31
EPB41-203ENST00000349460 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms