RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 ACEP12821 1306 aa21.17■□□□□ 0.98
APP-202ENST00000348990 ANXA1P04083 346 aa21.17■□□□□ 0.98
APP-202ENST00000348990 C14orf37Q86TY3 774 aa21.17■□□□□ 0.98
APP-202ENST00000348990 CLASRPQ8N2M8 674 aaKnown RBP21.17■□□□□ 0.98
APP-202ENST00000348990 ME3Q16798 604 aa21.16■□□□□ 0.98
APP-202ENST00000348990 ANKRD26Q9UPS8 1709 aa21.16■□□□□ 0.98
APP-202ENST00000348990 ZSCAN31Q96LW9 406 aaPredicted RBP21.16■□□□□ 0.98
APP-202ENST00000348990 TAF7Q15545 349 aaPredicted RBP21.16■□□□□ 0.98
APP-202ENST00000348990 CDC37L1Q7L3B6 337 aa21.16■□□□□ 0.98
APP-202ENST00000348990 ESF1Q9H501 851 aaKnown RBP21.16■□□□□ 0.98
APP-202ENST00000348990 CBX8Q9HC52 389 aa21.16■□□□□ 0.98
APP-202ENST00000348990 KIF20BQ96Q89 1820 aa21.15■□□□□ 0.98
APP-202ENST00000348990 GOLGA6L19H0YKK7 550 aa21.15■□□□□ 0.98
APP-202ENST00000348990 NBPF7P0C2Y1 421 aaPredicted RBP21.15■□□□□ 0.98
APP-202ENST00000348990 PI4K2BQ8TCG2 481 aa21.15■□□□□ 0.98
APP-202ENST00000348990 FUCA2Q9BTY2 467 aa21.15■□□□□ 0.98
APP-202ENST00000348990 DNAJC25Q9H1X3 360 aa21.15■□□□□ 0.98
APP-202ENST00000348990 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
APP-202ENST00000348990 CLIP2Q9UDT6 1046 aa21.15■□□□□ 0.98
APP-202ENST00000348990 ZNF165P49910 485 aa21.14■□□□□ 0.98
APP-202ENST00000348990 SH2B1Q9NRF2 756 aaPredicted RBP21.14■□□□□ 0.98
APP-202ENST00000348990 CGNQ9P2M7 1197 aaKnown RBP21.14■□□□□ 0.98
APP-202ENST00000348990 ALKQ9UM73 1620 aa21.14■□□□□ 0.98
APP-202ENST00000348990 MRVI1Q9Y6F6 885 aa21.14■□□□□ 0.97
APP-202ENST00000348990 SSH3Q8TE77 659 aa21.14■□□□□ 0.97
APP-202ENST00000348990 CPS1P31327 1500 aa21.14■□□□□ 0.97
APP-202ENST00000348990 DLG5Q8TDM6 1919 aa21.14■□□□□ 0.97
APP-202ENST00000348990 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
APP-202ENST00000348990 KIF20AO95235 890 aa21.13■□□□□ 0.97
APP-202ENST00000348990 NGDNQ8NEJ9 315 aaKnown RBP21.13■□□□□ 0.97
APP-202ENST00000348990 FGD1P98174 961 aa21.13■□□□□ 0.97
APP-202ENST00000348990 FILIP1Q7Z7B0 1213 aa21.13■□□□□ 0.97
APP-202ENST00000348990 EYA1Q99502 592 aa21.13■□□□□ 0.97
APP-202ENST00000348990 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
APP-202ENST00000348990 VPS53Q5VIR6 699 aa21.12■□□□□ 0.97
APP-202ENST00000348990 GPATCH3Q96I76 525 aa21.12■□□□□ 0.97
APP-202ENST00000348990 TRMT1Q9NXH9 659 aaKnown RBP21.12■□□□□ 0.97
APP-202ENST00000348990 NCBP1Q09161 790 aaKnown RBP21.12■□□□□ 0.97
APP-202ENST00000348990 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
APP-202ENST00000348990 NAP1L2Q9ULW6 460 aaPredicted RBP21.12■□□□□ 0.97
APP-202ENST00000348990 CRB1P82279 1406 aa21.12■□□□□ 0.97
APP-202ENST00000348990 C9orf78Q9NZ63 289 aaPredicted RBP21.11■□□□□ 0.97
APP-202ENST00000348990 PRR36Q9H6K5 1346 aa21.11■□□□□ 0.97
APP-202ENST00000348990 RBM8AQ9Y5S9 174 aaKnown RBP21.11■□□□□ 0.97
APP-202ENST00000348990 PI4KAP2A4QPH2 592 aa21.11■□□□□ 0.97
APP-202ENST00000348990 BECN2A8MW95 431 aa21.11■□□□□ 0.97
APP-202ENST00000348990 H3BQV1 296 aa21.11■□□□□ 0.97
APP-202ENST00000348990 HSP90B1P14625 803 aaKnown RBP21.11■□□□□ 0.97
APP-202ENST00000348990 PDCP20941 246 aa21.11■□□□□ 0.97
APP-202ENST00000348990 IFFO2Q5TF58 517 aa21.11■□□□□ 0.97
APP-202ENST00000348990 PI4KAP1Q8N8J0 262 aa21.11■□□□□ 0.97
APP-202ENST00000348990 TPCN1Q9ULQ1 816 aa21.11■□□□□ 0.97
APP-202ENST00000348990 PA2G4Q9UQ80 394 aaKnown RBP21.11■□□□□ 0.97
APP-202ENST00000348990 AOX1Q06278 1338 aa21.1■□□□□ 0.97
APP-202ENST00000348990 ZSCAN25Q6NSZ9 544 aa21.1■□□□□ 0.97
APP-202ENST00000348990 AACSQ86V21 672 aa21.1■□□□□ 0.97
APP-202ENST00000348990 DDX11Q96FC9 970 aa21.1■□□□□ 0.97
APP-202ENST00000348990 METP08581 1390 aa21.1■□□□□ 0.97
APP-202ENST00000348990 HSP90AB4PQ58FF6 505 aa21.1■□□□□ 0.97
APP-202ENST00000348990 BLOC1S2Q6QNY1 142 aa21.1■□□□□ 0.97
APP-202ENST00000348990 SMTNL1A8MU46 457 aa21.09■□□□□ 0.97
APP-202ENST00000348990 USHBP1Q8N6Y0 703 aa21.09■□□□□ 0.97
APP-202ENST00000348990 OGFRQ9NZT2 677 aa21.09■□□□□ 0.97
APP-202ENST00000348990 ZNF75DP51815 510 aa21.09■□□□□ 0.97
APP-202ENST00000348990 ANKRD7Q92527 254 aa21.09■□□□□ 0.97
APP-202ENST00000348990 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
APP-202ENST00000348990 LARP1Q6PKG0 1096 aaKnown RBP21.08■□□□□ 0.97
APP-202ENST00000348990 FAM227BQ96M60 508 aa21.08■□□□□ 0.97
APP-202ENST00000348990 FEZ1Q99689 392 aa21.08■□□□□ 0.97
APP-202ENST00000348990 SCAND2PQ9GZW5 306 aaPredicted RBP21.08■□□□□ 0.97
APP-202ENST00000348990 CEP135Q66GS9 1140 aa21.08■□□□□ 0.97
APP-202ENST00000348990 CACTINQ8WUQ7 758 aaKnown RBP21.08■□□□□ 0.96
APP-202ENST00000348990 CCDC8Q9H0W5 538 aaPredicted RBP21.08■□□□□ 0.96
APP-202ENST00000348990 ECHDC1Q9NTX5 307 aa21.08■□□□□ 0.96
APP-202ENST00000348990 CREB3L3Q68CJ9 461 aa21.07■□□□□ 0.96
APP-202ENST00000348990 PPFIA3O75145 1194 aa21.07■□□□□ 0.96
APP-202ENST00000348990 NR1I2O75469 434 aa21.07■□□□□ 0.96
APP-202ENST00000348990 PSMA5P28066 241 aa21.07■□□□□ 0.96
APP-202ENST00000348990 FSD1Q9BTV5 496 aa21.07■□□□□ 0.96
APP-202ENST00000348990 SIL1Q9H173 461 aa21.06■□□□□ 0.96
APP-202ENST00000348990 ZSWIM6Q9HCJ5 1215 aa21.06■□□□□ 0.96
APP-202ENST00000348990 MYO5BQ9ULV0 1848 aa21.06■□□□□ 0.96
APP-202ENST00000348990 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
APP-202ENST00000348990 NLRP6P59044 892 aa21.06■□□□□ 0.96
APP-202ENST00000348990 BOLA2Q9H3K6 86 aa21.06■□□□□ 0.96
APP-202ENST00000348990 DDX19AQ9NUU7 478 aaKnown RBP21.06■□□□□ 0.96
APP-202ENST00000348990 TAOK2Q9UL54 1235 aa21.06■□□□□ 0.96
APP-202ENST00000348990 CTIFO43310 598 aaKnown RBP21.05■□□□□ 0.96
APP-202ENST00000348990 ARID5BQ14865 1188 aa21.05■□□□□ 0.96
APP-202ENST00000348990 DNAAF4Q8WXU2 420 aa21.05■□□□□ 0.96
APP-202ENST00000348990 A0A087WWV3 80 aa21.05■□□□□ 0.96
APP-202ENST00000348990 ERICH4A6NGS2 130 aa21.05■□□□□ 0.96
APP-202ENST00000348990 PTPN14Q15678 1187 aa21.05■□□□□ 0.96
APP-202ENST00000348990 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
APP-202ENST00000348990 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
APP-202ENST00000348990 RNF20Q5VTR2 975 aa21.05■□□□□ 0.96
APP-202ENST00000348990 CCDC9Q9Y3X0 531 aaKnown RBP21.05■□□□□ 0.96
APP-202ENST00000348990 LEO1Q8WVC0 666 aaPredicted RBP21.04■□□□□ 0.96
APP-202ENST00000348990 PAXBP1Q9Y5B6 917 aa21.04■□□□□ 0.96
APP-202ENST00000348990 CCDC171Q6TFL3 1326 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms