RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 NAA30Q147X3 362 aaPredicted RBP25.58■■□□□ 1.69
TRIM3-201ENST00000345851 LRRCC1Q9C099 1032 aa25.58■■□□□ 1.69
TRIM3-201ENST00000345851 RTF1Q92541 710 aaKnown RBP25.58■■□□□ 1.68
TRIM3-201ENST00000345851 G2E3Q7L622 706 aa25.57■■□□□ 1.68
TRIM3-201ENST00000345851 ARHGEF10O15013 1369 aa25.57■■□□□ 1.68
TRIM3-201ENST00000345851 GOLGA6L6A8MZA4 724 aa25.57■■□□□ 1.68
TRIM3-201ENST00000345851 RGPD1P0DJD0 1748 aa25.56■■□□□ 1.68
TRIM3-201ENST00000345851 MAP4K4O95819 1239 aaPredicted RBP25.56■■□□□ 1.68
TRIM3-201ENST00000345851 F13A1P00488 732 aa25.56■■□□□ 1.68
TRIM3-201ENST00000345851 DNM1Q05193 864 aaKnown RBP25.56■■□□□ 1.68
TRIM3-201ENST00000345851 PTPRCP08575 1304 aa25.55■■□□□ 1.68
TRIM3-201ENST00000345851 LRMPQ12912 555 aa25.55■■□□□ 1.68
TRIM3-201ENST00000345851 SALL3Q9BXA9 1300 aa25.55■■□□□ 1.68
TRIM3-201ENST00000345851 NBPF6Q5VWK0 638 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 NBPF4Q96M43 638 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 KRT28Q7Z3Y7 464 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 FEZ1Q99689 392 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 OGFRQ9NZT2 677 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 SMC3Q9UQE7 1217 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 CHL1O00533 1208 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 TPM3P06753 285 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 C19orf44Q9H6X5 657 aa25.54■■□□□ 1.68
TRIM3-201ENST00000345851 AK2P54819 239 aa25.53■■□□□ 1.68
TRIM3-201ENST00000345851 TMEM94Q12767 1356 aa25.53■■□□□ 1.68
TRIM3-201ENST00000345851 PNMA6EA0A0J9YXQ4 647 aa25.53■■□□□ 1.68
TRIM3-201ENST00000345851 GCP02774 474 aa25.53■■□□□ 1.68
TRIM3-201ENST00000345851 CPA1P15085 419 aa25.53■■□□□ 1.68
TRIM3-201ENST00000345851 GTF2E1P29083 439 aaPredicted RBP25.53■■□□□ 1.68
TRIM3-201ENST00000345851 DRC7Q8IY82 874 aa25.53■■□□□ 1.68
TRIM3-201ENST00000345851 CCDC186Q7Z3E2 898 aa25.52■■□□□ 1.68
TRIM3-201ENST00000345851 NECTIN2Q92692 538 aa25.52■■□□□ 1.68
TRIM3-201ENST00000345851 TSPYL4Q9UJ04 414 aa25.52■■□□□ 1.68
TRIM3-201ENST00000345851 GNAI2P04899 355 aa25.52■■□□□ 1.68
TRIM3-201ENST00000345851 HSPA4P34932 840 aa25.52■■□□□ 1.68
TRIM3-201ENST00000345851 KDRP35968 1356 aa25.52■■□□□ 1.68
TRIM3-201ENST00000345851 ZBTB22O15209 634 aa25.51■■□□□ 1.67
TRIM3-201ENST00000345851 CCDC192P0DO97 292 aa25.51■■□□□ 1.67
TRIM3-201ENST00000345851 HAP1P54257 671 aaPredicted RBP25.51■■□□□ 1.67
TRIM3-201ENST00000345851 ZC3H6P61129 1189 aaKnown RBP25.51■■□□□ 1.67
TRIM3-201ENST00000345851 CAMK4Q16566 473 aa25.51■■□□□ 1.67
TRIM3-201ENST00000345851 LUZP1Q86V48 1076 aa25.51■■□□□ 1.67
TRIM3-201ENST00000345851 IL1RAPL2Q9NP60 686 aa25.51■■□□□ 1.67
TRIM3-201ENST00000345851 CTNNA3Q9UI47 895 aa25.51■■□□□ 1.67
TRIM3-201ENST00000345851 KIAA0232Q92628 1395 aa25.51■■□□□ 1.67
TRIM3-201ENST00000345851 ATF3P18847 181 aa25.5■■□□□ 1.67
TRIM3-201ENST00000345851 IP6K1Q92551 441 aa25.5■■□□□ 1.67
TRIM3-201ENST00000345851 NRBP1Q9UHY1 535 aa25.5■■□□□ 1.67
TRIM3-201ENST00000345851 RUFY3Q7L099 469 aa25.5■■□□□ 1.67
TRIM3-201ENST00000345851 LARGE1O95461 756 aa25.49■■□□□ 1.67
TRIM3-201ENST00000345851 ATP6V1DQ9Y5K8 247 aa25.49■■□□□ 1.67
TRIM3-201ENST00000345851 VPS37CA5D8V6 355 aaPredicted RBP25.49■■□□□ 1.67
TRIM3-201ENST00000345851 LTN1O94822 1766 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 TNNT1P13805 278 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 CCDC83Q8IWF9 413 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 RASEFQ8IZ41 740 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 CABLES1Q8TDN4 633 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.48■■□□□ 1.67
TRIM3-201ENST00000345851 SNX14Q9Y5W7 946 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 CRB1P82279 1406 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 NUTM1Q86Y26 1132 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 AXIN2Q9Y2T1 843 aa25.48■■□□□ 1.67
TRIM3-201ENST00000345851 IL17REQ8NFR9 667 aa25.47■■□□□ 1.67
TRIM3-201ENST00000345851 LIMCH1Q9UPQ0 1083 aa25.47■■□□□ 1.67
TRIM3-201ENST00000345851 GJB2P29033 226 aa25.46■■□□□ 1.67
TRIM3-201ENST00000345851 FAM200AQ8TCP9 573 aa25.46■■□□□ 1.67
TRIM3-201ENST00000345851 ZNF592Q92610 1267 aa25.46■■□□□ 1.67
TRIM3-201ENST00000345851 C1orf167Q5SNV9 1468 aa25.46■■□□□ 1.67
TRIM3-201ENST00000345851 CKAP2LQ8IYA6 745 aa25.46■■□□□ 1.67
TRIM3-201ENST00000345851 GNAT3A8MTJ3 354 aa25.46■■□□□ 1.67
TRIM3-201ENST00000345851 CCT4P50991 539 aaKnown RBP25.46■■□□□ 1.67
TRIM3-201ENST00000345851 TTC14Q96N46 770 aa25.46■■□□□ 1.67
TRIM3-201ENST00000345851 SMTNL1A8MU46 457 aa25.45■■□□□ 1.66
TRIM3-201ENST00000345851 NWD1Q149M9 1564 aa25.45■■□□□ 1.66
TRIM3-201ENST00000345851 KCNH5Q8NCM2 988 aa25.44■■□□□ 1.66
TRIM3-201ENST00000345851 TMEM51Q9NW97 253 aa25.44■■□□□ 1.66
TRIM3-201ENST00000345851 CCDC112Q8NEF3 446 aa25.44■■□□□ 1.66
TRIM3-201ENST00000345851 MTMR6Q9Y217 621 aa25.44■■□□□ 1.66
TRIM3-201ENST00000345851 KDM4FA0A1W2PPD8 638 aa25.43■■□□□ 1.66
TRIM3-201ENST00000345851 TRIM5Q9C035 493 aa25.43■■□□□ 1.66
TRIM3-201ENST00000345851 DDX41Q9UJV9 622 aaKnown RBP25.43■■□□□ 1.66
TRIM3-201ENST00000345851 MRVI1Q9Y6F6 885 aa25.43■■□□□ 1.66
TRIM3-201ENST00000345851 STRCP1A6NGW2 1772 aa25.43■■□□□ 1.66
TRIM3-201ENST00000345851 TYRO3Q06418 890 aa25.43■■□□□ 1.66
TRIM3-201ENST00000345851 FAM173BQ6P4H8 233 aa25.43■■□□□ 1.66
TRIM3-201ENST00000345851 DDX54Q8TDD1 881 aaKnown RBP25.43■■□□□ 1.66
TRIM3-201ENST00000345851 IL17RAQ96F46 866 aa25.43■■□□□ 1.66
TRIM3-201ENST00000345851 CASTP20810 708 aaKnown RBP25.42■■□□□ 1.66
TRIM3-201ENST00000345851 FERMT3Q86UX7 667 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 SPG7Q9UQ90 795 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 NFAT5O94916 1531 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 TUBGCP6Q96RT7 1819 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 RAD50Q92878 1312 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 SLFN14P0C7P3 912 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 LIG1P18858 919 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 MAP3K11Q16584 847 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 ARHGEF25Q86VW2 580 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 LGR6Q9HBX8 967 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 STAP2Q9UGK3 403 aa25.42■■□□□ 1.66
TRIM3-201ENST00000345851 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.42■■□□□ 1.66
TRIM3-201ENST00000345851 V9GYY5 206 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms