RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 LMBR1LQ6UX01 489 aa19.46■□□□□ 0.71
SMARCA4-201ENST00000344626 LGR6Q9HBX8 967 aa19.46■□□□□ 0.71
SMARCA4-201ENST00000344626 A1BGP04217 495 aa19.46■□□□□ 0.71
SMARCA4-201ENST00000344626 H0YIN7 160 aa19.46■□□□□ 0.71
SMARCA4-201ENST00000344626 GLIPR1L2Q4G1C9 344 aa19.46■□□□□ 0.71
SMARCA4-201ENST00000344626 CCDC87Q9NVE4 849 aa19.46■□□□□ 0.71
SMARCA4-201ENST00000344626 IRS4O14654 1257 aaPredicted RBP19.45■□□□□ 0.7
SMARCA4-201ENST00000344626 CWC27Q6UX04 472 aaKnown RBP19.45■□□□□ 0.7
SMARCA4-201ENST00000344626 PREX2Q70Z35 1606 aa19.45■□□□□ 0.7
SMARCA4-201ENST00000344626 CDKL5O76039 1030 aa19.45■□□□□ 0.7
SMARCA4-201ENST00000344626 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
SMARCA4-201ENST00000344626 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
SMARCA4-201ENST00000344626 BLOC1S2Q6QNY1 142 aa19.44■□□□□ 0.7
SMARCA4-201ENST00000344626 KSR2Q6VAB6 950 aa19.44■□□□□ 0.7
SMARCA4-201ENST00000344626 TTF1Q15361 905 aaPredicted RBP19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 VEZTQ9HBM0 779 aa19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 PARD3Q8TEW0 1356 aa19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 CHMP4BP1P59074 171 aa19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 ALDH1L1O75891 902 aa19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 SPTY2D1Q68D10 685 aaPredicted RBP19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 PIBF1Q8WXW3 757 aa19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 HELBQ8NG08 1087 aaPredicted RBP19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 NF2P35240 595 aa19.43■□□□□ 0.7
SMARCA4-201ENST00000344626 SOS1Q07889 1333 aaPredicted RBP19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 TXLNAP40222 546 aa19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 C8orf58Q8NAV2 365 aa19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 TRIM27P14373 513 aa19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 TMEM132AQ24JP5 1023 aa19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 R3HCC1Q9Y3T6 440 aaKnown RBP19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 FLAD1Q8NFF5 587 aa19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 ZNF396Q96N95 335 aaPredicted RBP19.42■□□□□ 0.7
SMARCA4-201ENST00000344626 SLC4A8Q2Y0W8 1093 aa19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 CDK5RAP3Q96JB5 506 aa19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 EYA3Q99504 573 aa19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 NAPBQ9H115 298 aa19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 NAP1L5Q96NT1 182 aaPredicted RBP19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 ZNF408Q9H9D4 720 aa19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 BAG3O95817 575 aa19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 PCMTD1Q96MG8 357 aaPredicted RBP19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 SLC52A2Q9HAB3 445 aa19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 SMARCA5O60264 1052 aaPredicted RBP19.41■□□□□ 0.7
SMARCA4-201ENST00000344626 RBM6P78332 1123 aaKnown RBP19.4■□□□□ 0.7
SMARCA4-201ENST00000344626 FAM89AQ96GI7 184 aa19.4■□□□□ 0.7
SMARCA4-201ENST00000344626 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
SMARCA4-201ENST00000344626 KCNQ4P56696 695 aa19.4■□□□□ 0.7
SMARCA4-201ENST00000344626 CARD10Q9BWT7 1032 aa19.4■□□□□ 0.7
SMARCA4-201ENST00000344626 ZNF444Q8N0Y2 327 aaPredicted RBP19.4■□□□□ 0.7
SMARCA4-201ENST00000344626 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.7
SMARCA4-201ENST00000344626 GRM8O00222 908 aa19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 LARGE2Q8N3Y3 721 aa19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 ZNF496Q96IT1 587 aaPredicted RBP19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 ZSCAN31Q96LW9 406 aaPredicted RBP19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 UQCRFS1P1P0C7P4 283 aa19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 NOC3LQ8WTT2 800 aaKnown RBP19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 RBM17Q96I25 401 aaKnown RBP19.39■□□□□ 0.69
SMARCA4-201ENST00000344626 ECM2O94769 699 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 PDE4CQ08493 712 aa19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 CWF19L2Q2TBE0 894 aaKnown RBP19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 BABAM1Q9NWV8 329 aa19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 IBSPP21815 317 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 JMYQ8N9B5 988 aa19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 WASF1Q92558 559 aa19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 ATP2B3Q16720 1220 aa19.38■□□□□ 0.69
SMARCA4-201ENST00000344626 GCC2Q8IWJ2 1684 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 CABP5Q9NP86 173 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 RANBP6O60518 1105 aaKnown RBP19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 PDRG1Q9NUG6 133 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 JAG2Q9Y219 1238 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 ARAP3Q8WWN8 1544 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 ARHGAP27Q6ZUM4 889 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 DDX21Q9NR30 783 aaKnown RBP eCLIP19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 IL13P35225 146 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 WWC2Q6AWC2 1192 aa19.37■□□□□ 0.69
SMARCA4-201ENST00000344626 GSTO1P78417 241 aa19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 ZNF804AQ7Z570 1209 aa19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 RNF41Q9H4P4 317 aaPredicted RBP19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 NOL7Q9UMY1 257 aaKnown RBP19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 HLA-DOAP06340 250 aa19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 GOLIM4O00461 696 aa19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 IPO7O95373 1038 aaKnown RBP19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 PARP10Q53GL7 1025 aa19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 JAKMIP1Q96N16 626 aaKnown RBP19.36■□□□□ 0.69
SMARCA4-201ENST00000344626 ADCY10Q96PN6 1610 aa19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 LOC102724428A0A0B4J2F2 783 aa19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 SIK1P57059 783 aa19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 CCDC96Q2M329 555 aa19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 ECHDC1Q9NTX5 307 aa19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 ERVV-2B6SEH9 535 aa19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 ZGPATQ8N5A5 531 aaKnown RBP19.35■□□□□ 0.69
SMARCA4-201ENST00000344626 OLFM4Q6UX06 510 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms