RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 MSH6P52701 1360 aa14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 TMEM266Q2M3C6 531 aa14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 NUP88Q99567 741 aaPredicted RBP14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 MAP3K12Q12852 859 aa14.16□□□□□ -0.14
TRIOBP-202ENST00000344404 STAC3Q96MF2 364 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 AKAP2Q9Y2D5 859 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 ZNF213O14771 459 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 MBD3O95983 291 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 CCDC24Q8N4L8 307 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 EHMT1Q9H9B1 1298 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 A0A087WZG4 1122 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 GJC1P36383 396 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 MCM2P49736 904 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 IQCA1Q86XH1 822 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 WDR33Q9C0J8 1336 aaKnown RBP14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 IDEP14735 1019 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 CASQ1P31415 396 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 SSRP1Q08945 709 aaKnown RBP14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 TAF7Q15545 349 aaPredicted RBP14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 GIGYF2Q6Y7W6 1299 aaKnown RBP14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 CHD1LQ86WJ1 897 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 TSPY2A6NKD2 308 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 NOP2P46087 812 aaKnown RBP14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 PPP1R14CQ8TAE6 165 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 MAP3K2Q9Y2U5 619 aa14.15□□□□□ -0.14
TRIOBP-202ENST00000344404 MRE11P49959 708 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 CUX1P39880 1505 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 MSL1Q68DK7 614 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 BRPF3Q9ULD4 1205 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 ATF7IPQ6VMQ6 1270 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 CFTRP13569 1480 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 BAG4O95429 457 aaKnown RBP14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 PAIP2Q9BPZ3 127 aaKnown RBP14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 CRACR2AQ9BSW2 395 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 BIN1O00499 593 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 TAF12Q16514 161 aa14.14□□□□□ -0.15
TRIOBP-202ENST00000344404 CCDC194A0A1B0GVG4 234 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 ANKRD24Q8TF21 1146 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 K7ELQ4 463 aaPredicted RBP14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 TIGD1Q96MW7 591 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 MRC2Q9UBG0 1479 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 BMS1Q14692 1282 aaKnown RBP14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 HDAC9Q9UKV0 1011 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 SETD1BQ9UPS6 1966 aaKnown RBP14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 SLC39A6Q13433 755 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 GCOM1H8Y6P7 765 aaPredicted RBP14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 HLA-DOAP06340 250 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 MYZAPP0CAP1 466 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 PSMC4P43686 418 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 CATIPQ7Z7H3 387 aa14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
TRIOBP-202ENST00000344404 SPECC1Q5M775 1068 aa14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 LDHAL6AQ6ZMR3 332 aa14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 SLF2Q8IX21 1173 aa14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 GOLGA8AA7E2F4 631 aa14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 GOLGA8BA8MQT2 603 aa14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 HLTFQ14527 1009 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 JDP2Q8WYK2 163 aa14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 MTIF2P46199 727 aaKnown RBP14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 SIRT1Q96EB6 747 aa14.12□□□□□ -0.15
TRIOBP-202ENST00000344404 UQCRHP07919 91 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 CCDC40Q4G0X9 1142 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 PPP1R42Q7Z4L9 355 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 VPS36Q86VN1 386 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 TMEM110-MUSTN1A8MSY1 372 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 DDB1Q16531 1140 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 C8orf76Q96K31 380 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 TRMT1Q9NXH9 659 aaKnown RBP14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 SLC52A1Q9NWF4 448 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 NIP7Q9Y221 180 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 SMTNL1A8MU46 457 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 SPATA24Q86W54 205 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 KAT14Q9H8E8 782 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 CCDC7Q96M83 1385 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 UQCRHLA0A096LP55 91 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 SYCE3A1L190 88 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 GOLIM4O00461 696 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 PHACTR2O75167 634 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 NSD3Q9BZ95 1437 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 NDC80O14777 642 aa14.11□□□□□ -0.15
TRIOBP-202ENST00000344404 UTP14AQ9BVJ6 771 aaKnown RBP14.1□□□□□ -0.15
TRIOBP-202ENST00000344404 KIF21BO75037 1637 aa14.1□□□□□ -0.15
TRIOBP-202ENST00000344404 HSP90AA4PQ58FG1 418 aa14.1□□□□□ -0.15
TRIOBP-202ENST00000344404 CDC5LQ99459 802 aaKnown RBP14.1□□□□□ -0.15
TRIOBP-202ENST00000344404 PKD2L1Q9P0L9 805 aa14.1□□□□□ -0.15
TRIOBP-202ENST00000344404 ZYXQ15942 572 aaKnown RBP14.1□□□□□ -0.15
TRIOBP-202ENST00000344404 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
TRIOBP-202ENST00000344404 FGD6Q6ZV73 1430 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms