RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 TRIM35Q9UPQ4 493 aa26.4■■□□□ 1.82
SYNE2-201ENST00000341472 ERVV-1B6SEH8 477 aa26.39■■□□□ 1.82
SYNE2-201ENST00000341472 CHL1O00533 1208 aa26.38■■□□□ 1.81
SYNE2-201ENST00000341472 EIF2S2P20042 333 aaKnown RBP26.38■■□□□ 1.81
SYNE2-201ENST00000341472 KIF6Q6ZMV9 814 aa26.38■■□□□ 1.81
SYNE2-201ENST00000341472 LAS1LQ9Y4W2 734 aaKnown RBP26.38■■□□□ 1.81
SYNE2-201ENST00000341472 TTLL7Q6ZT98 887 aa26.37■■□□□ 1.81
SYNE2-201ENST00000341472 ERBB4Q15303 1308 aa26.37■■□□□ 1.81
SYNE2-201ENST00000341472 FAM177BA6PVY3 158 aa26.36■■□□□ 1.81
SYNE2-201ENST00000341472 RNF181Q9P0P0 153 aa26.36■■□□□ 1.81
SYNE2-201ENST00000341472 MAP3K15Q6ZN16 1313 aa26.36■■□□□ 1.81
SYNE2-201ENST00000341472 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
SYNE2-201ENST00000341472 CNKSR1Q969H4 720 aa26.35■■□□□ 1.81
SYNE2-201ENST00000341472 SRGNP10124 158 aa26.34■■□□□ 1.81
SYNE2-201ENST00000341472 GTF2E1P29083 439 aaPredicted RBP26.34■■□□□ 1.81
SYNE2-201ENST00000341472 STYK1Q6J9G0 422 aa26.34■■□□□ 1.81
SYNE2-201ENST00000341472 MASTLQ96GX5 879 aa26.33■■□□□ 1.81
SYNE2-201ENST00000341472 NRXN2Q9P2S2 1712 aa26.32■■□□□ 1.8
SYNE2-201ENST00000341472 APAF1O14727 1248 aa26.32■■□□□ 1.8
SYNE2-201ENST00000341472 ZBTB3Q9H5J0 574 aa26.32■■□□□ 1.8
SYNE2-201ENST00000341472 ZNF219Q9P2Y4 722 aaPredicted RBP26.32■■□□□ 1.8
SYNE2-201ENST00000341472 SENP3-EIF4A1A0A087X0R7 540 aa26.31■■□□□ 1.8
SYNE2-201ENST00000341472 C21orf2O43822 256 aa26.31■■□□□ 1.8
SYNE2-201ENST00000341472 RASSF7Q02833 373 aa26.31■■□□□ 1.8
SYNE2-201ENST00000341472 PDIA6Q15084 440 aa26.31■■□□□ 1.8
SYNE2-201ENST00000341472 LMNB1P20700 586 aa26.3■■□□□ 1.8
SYNE2-201ENST00000341472 NYXQ9GZU5 481 aa26.3■■□□□ 1.8
SYNE2-201ENST00000341472 AFDNP55196 1824 aaKnown RBP26.3■■□□□ 1.8
SYNE2-201ENST00000341472 DLG5Q8TDM6 1919 aa26.29■■□□□ 1.8
SYNE2-201ENST00000341472 KLRG2A4D1S0 409 aaPredicted RBP26.29■■□□□ 1.8
SYNE2-201ENST00000341472 KIF3CO14782 793 aa26.29■■□□□ 1.8
SYNE2-201ENST00000341472 NECTIN2Q92692 538 aa26.29■■□□□ 1.8
SYNE2-201ENST00000341472 CFAP44Q96MT7 982 aa26.29■■□□□ 1.8
SYNE2-201ENST00000341472 SCN7AQ01118 1682 aa26.28■■□□□ 1.8
SYNE2-201ENST00000341472 NPR1P16066 1061 aa26.28■■□□□ 1.8
SYNE2-201ENST00000341472 GPTP24298 496 aa26.28■■□□□ 1.8
SYNE2-201ENST00000341472 KRT24Q2M2I5 525 aa26.28■■□□□ 1.8
SYNE2-201ENST00000341472 ANXA1P04083 346 aa26.27■■□□□ 1.8
SYNE2-201ENST00000341472 PROSER3Q2NL68 480 aa26.27■■□□□ 1.8
SYNE2-201ENST00000341472 GIGYF2Q6Y7W6 1299 aaKnown RBP26.27■■□□□ 1.8
SYNE2-201ENST00000341472 LRP10Q7Z4F1 713 aa26.27■■□□□ 1.8
SYNE2-201ENST00000341472 NFKBIEO00221 500 aa26.26■■□□□ 1.79
SYNE2-201ENST00000341472 CCDC184Q52MB2 194 aa26.26■■□□□ 1.79
SYNE2-201ENST00000341472 PRPF40BQ6NWY9 871 aaKnown RBP26.26■■□□□ 1.79
SYNE2-201ENST00000341472 ZNF34Q8IZ26 560 aa26.26■■□□□ 1.79
SYNE2-201ENST00000341472 KDM3BQ7LBC6 1761 aa26.25■■□□□ 1.79
SYNE2-201ENST00000341472 KDM2BQ8NHM5 1336 aa26.25■■□□□ 1.79
SYNE2-201ENST00000341472 CALD1Q05682 793 aaKnown RBP26.25■■□□□ 1.79
SYNE2-201ENST00000341472 SUSD4Q5VX71 490 aa26.25■■□□□ 1.79
SYNE2-201ENST00000341472 COPS6Q7L5N1 327 aa26.25■■□□□ 1.79
SYNE2-201ENST00000341472 NMRK2Q9NPI5 230 aa26.25■■□□□ 1.79
SYNE2-201ENST00000341472 DDX21Q9NR30 783 aaKnown RBP eCLIP26.25■■□□□ 1.79
SYNE2-201ENST00000341472 BRCA1P38398 1863 aaKnown RBP26.25■■□□□ 1.79
SYNE2-201ENST00000341472 PRELPP51888 382 aa26.24■■□□□ 1.79
SYNE2-201ENST00000341472 SOGA3Q5TF21 947 aa26.24■■□□□ 1.79
SYNE2-201ENST00000341472 NUTM1Q86Y26 1132 aa26.24■■□□□ 1.79
SYNE2-201ENST00000341472 ANP32CO43423 234 aa26.23■■□□□ 1.79
SYNE2-201ENST00000341472 AIMP1Q12904 312 aaKnown RBP26.23■■□□□ 1.79
SYNE2-201ENST00000341472 ERFEQ4G0M1 354 aa26.23■■□□□ 1.79
SYNE2-201ENST00000341472 XAGE3Q8WTP9 111 aa26.23■■□□□ 1.79
SYNE2-201ENST00000341472 HOXB7P09629 217 aa26.22■■□□□ 1.79
SYNE2-201ENST00000341472 ZNF853P0CG23 659 aa26.22■■□□□ 1.79
SYNE2-201ENST00000341472 ALDH1B1P30837 517 aa26.22■■□□□ 1.79
SYNE2-201ENST00000341472 PARP10Q53GL7 1025 aa26.22■■□□□ 1.79
SYNE2-201ENST00000341472 MBIPQ9NS73 344 aa26.22■■□□□ 1.79
SYNE2-201ENST00000341472 ZC3H4Q9UPT8 1303 aaKnown RBP26.21■■□□□ 1.79
SYNE2-201ENST00000341472 GNAI1P63096 354 aa26.21■■□□□ 1.79
SYNE2-201ENST00000341472 HDGFL1Q5TGJ6 251 aa26.21■■□□□ 1.79
SYNE2-201ENST00000341472 DUSP27Q5VZP5 1158 aa26.21■■□□□ 1.79
SYNE2-201ENST00000341472 PPP1R42Q7Z4L9 355 aa26.21■■□□□ 1.79
SYNE2-201ENST00000341472 C7orf43Q8WVR3 580 aa26.21■■□□□ 1.79
SYNE2-201ENST00000341472 IFT57Q9NWB7 429 aa26.21■■□□□ 1.79
SYNE2-201ENST00000341472 ARFGEF1Q9Y6D6 1849 aa26.21■■□□□ 1.79
SYNE2-201ENST00000341472 UBN2Q6ZU65 1347 aa26.2■■□□□ 1.79
SYNE2-201ENST00000341472 TOMM70O94826 608 aa26.2■■□□□ 1.78
SYNE2-201ENST00000341472 TAOK3Q9H2K8 898 aa26.2■■□□□ 1.78
SYNE2-201ENST00000341472 HSP90AB3PQ58FF7 597 aa26.19■■□□□ 1.78
SYNE2-201ENST00000341472 RRAGCQ9HB90 399 aa26.19■■□□□ 1.78
SYNE2-201ENST00000341472 CHPF2Q9P2E5 772 aa26.19■■□□□ 1.78
SYNE2-201ENST00000341472 C16orf71Q8IYS4 520 aaPredicted RBP26.18■■□□□ 1.78
SYNE2-201ENST00000341472 UTP14AQ9BVJ6 771 aaKnown RBP26.18■■□□□ 1.78
SYNE2-201ENST00000341472 DBF4Q9UBU7 674 aaPredicted RBP26.18■■□□□ 1.78
SYNE2-201ENST00000341472 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
SYNE2-201ENST00000341472 LTBP3Q9NS15 1303 aa26.17■■□□□ 1.78
SYNE2-201ENST00000341472 GLTPD2A6NH11 291 aa26.17■■□□□ 1.78
SYNE2-201ENST00000341472 CRY2Q49AN0 593 aa26.17■■□□□ 1.78
SYNE2-201ENST00000341472 CCDC93Q567U6 631 aa26.17■■□□□ 1.78
SYNE2-201ENST00000341472 MRS2Q9HD23 443 aa26.17■■□□□ 1.78
SYNE2-201ENST00000341472 NTSR2O95665 410 aa26.16■■□□□ 1.78
SYNE2-201ENST00000341472 TCIRG1Q13488 830 aa26.16■■□□□ 1.78
SYNE2-201ENST00000341472 IBTKQ9P2D0 1353 aaPredicted RBP26.16■■□□□ 1.78
SYNE2-201ENST00000341472 LAMB4A4D0S4 1761 aa26.15■■□□□ 1.78
SYNE2-201ENST00000341472 SLC10A5Q5PT55 438 aa26.15■■□□□ 1.78
SYNE2-201ENST00000341472 DPY19L2Q6NUT2 758 aa26.15■■□□□ 1.78
SYNE2-201ENST00000341472 RPGRQ92834 1020 aaKnown RBP26.15■■□□□ 1.78
SYNE2-201ENST00000341472 HYPKQ9NX55 129 aa26.15■■□□□ 1.78
SYNE2-201ENST00000341472 ABCC12Q96J65 1359 aa26.15■■□□□ 1.78
SYNE2-201ENST00000341472 ANKRD31Q8N7Z5 1873 aa26.15■■□□□ 1.78
SYNE2-201ENST00000341472 HSPA6P17066 643 aa26.14■■□□□ 1.78
SYNE2-201ENST00000341472 HOXA10P31260 410 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 293.4 ms