RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 CASC1Q6TDU7 716 aa23.87■■□□□ 1.41
NHLRC1-201ENST00000340650 RBSNQ9H1K0 784 aa23.87■■□□□ 1.41
NHLRC1-201ENST00000340650 PI4KAP2A4QPH2 592 aa23.86■■□□□ 1.41
NHLRC1-201ENST00000340650 PI4KAP1Q8N8J0 262 aa23.86■■□□□ 1.41
NHLRC1-201ENST00000340650 NCLP19338 710 aaKnown RBP23.85■■□□□ 1.41
NHLRC1-201ENST00000340650 CEP85Q6P2H3 762 aa23.85■■□□□ 1.41
NHLRC1-201ENST00000340650 VSIG10Q8N0Z9 540 aa23.85■■□□□ 1.41
NHLRC1-201ENST00000340650 OTUD7AQ8TE49 926 aaPredicted RBP23.85■■□□□ 1.41
NHLRC1-201ENST00000340650 SHANK3Q9BYB0 1731 aa23.85■■□□□ 1.41
NHLRC1-201ENST00000340650 NKX1-1Q15270 411 aaPredicted RBP23.84■■□□□ 1.41
NHLRC1-201ENST00000340650 PDCL3Q9H2J4 239 aa23.84■■□□□ 1.41
NHLRC1-201ENST00000340650 NOL7Q9UMY1 257 aaKnown RBP23.84■■□□□ 1.41
NHLRC1-201ENST00000340650 ZDHHC9Q9Y397 364 aa23.84■■□□□ 1.41
NHLRC1-201ENST00000340650 ZNF500O60304 480 aaPredicted RBP23.83■■□□□ 1.41
NHLRC1-201ENST00000340650 GPT2Q8TD30 523 aa23.83■■□□□ 1.41
NHLRC1-201ENST00000340650 FMNL2Q96PY5 1086 aa23.83■■□□□ 1.41
NHLRC1-201ENST00000340650 C5P01031 1676 aa23.83■■□□□ 1.41
NHLRC1-201ENST00000340650 REC8O95072 547 aa23.83■■□□□ 1.4
NHLRC1-201ENST00000340650 ZGPATQ8N5A5 531 aaKnown RBP23.83■■□□□ 1.4
NHLRC1-201ENST00000340650 ERVV-2B6SEH9 535 aa23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 DNAAF4Q8WXU2 420 aa23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 USP16Q9Y5T5 823 aa23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 ADCY9O60503 1353 aa23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 PRPF40AO75400 957 aaKnown RBP23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 SNRPA1P09661 255 aaKnown RBP23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 MYL6BP14649 208 aa23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 PRIM1P49642 420 aaKnown RBP23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 PDIA6Q15084 440 aa23.82■■□□□ 1.4
NHLRC1-201ENST00000340650 PXDNLA1KZ92 1463 aa23.81■■□□□ 1.4
NHLRC1-201ENST00000340650 PIP4K2AP48426 406 aaPredicted RBP23.81■■□□□ 1.4
NHLRC1-201ENST00000340650 AIMP1Q12904 312 aaKnown RBP23.81■■□□□ 1.4
NHLRC1-201ENST00000340650 SRCIN1Q9C0H9 1055 aa23.8■■□□□ 1.4
NHLRC1-201ENST00000340650 DDX21Q9NR30 783 aaKnown RBP eCLIP23.8■■□□□ 1.4
NHLRC1-201ENST00000340650 GNAI2P04899 355 aa23.8■■□□□ 1.4
NHLRC1-201ENST00000340650 HYPKQ9NX55 129 aa23.8■■□□□ 1.4
NHLRC1-201ENST00000340650 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.8■■□□□ 1.4
NHLRC1-201ENST00000340650 USP44Q9H0E7 712 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 DISP2A7MBM2 1401 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 PLCH1Q4KWH8 1693 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 ERC2O15083 957 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 GNAI3P08754 354 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 LRSAM1Q6UWE0 723 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 ZMYND15Q9H091 742 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 MAP3K2Q9Y2U5 619 aa23.79■■□□□ 1.4
NHLRC1-201ENST00000340650 BEND3Q5T5X7 828 aa23.78■■□□□ 1.4
NHLRC1-201ENST00000340650 PKNOX2Q96KN3 472 aa23.78■■□□□ 1.4
NHLRC1-201ENST00000340650 SMARCA5O60264 1052 aaPredicted RBP23.78■■□□□ 1.4
NHLRC1-201ENST00000340650 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
NHLRC1-201ENST00000340650 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
NHLRC1-201ENST00000340650 RBM27Q9P2N5 1060 aaKnown RBP23.78■■□□□ 1.4
NHLRC1-201ENST00000340650 OSBPL3Q9H4L5 887 aa23.77■■□□□ 1.4
NHLRC1-201ENST00000340650 LRRFIP2Q9Y608 721 aaKnown RBP23.76■■□□□ 1.39
NHLRC1-201ENST00000340650 MCM5P33992 734 aa23.76■■□□□ 1.39
NHLRC1-201ENST00000340650 KSR2Q6VAB6 950 aa23.76■■□□□ 1.39
NHLRC1-201ENST00000340650 TMEM63CQ9P1W3 806 aa23.76■■□□□ 1.39
NHLRC1-201ENST00000340650 APBB1O00213 710 aa23.75■■□□□ 1.39
NHLRC1-201ENST00000340650 UBTFL1P0CB47 393 aaPredicted RBP23.75■■□□□ 1.39
NHLRC1-201ENST00000340650 TMOD3Q9NYL9 352 aa23.75■■□□□ 1.39
NHLRC1-201ENST00000340650 ZKSCAN5Q9Y2L8 839 aa23.75■■□□□ 1.39
NHLRC1-201ENST00000340650 TOGARAM1Q9Y4F4 1720 aa23.74■■□□□ 1.39
NHLRC1-201ENST00000340650 EXOC5O00471 708 aa23.74■■□□□ 1.39
NHLRC1-201ENST00000340650 N4BP2Q86UW6 1770 aaPredicted RBP23.74■■□□□ 1.39
NHLRC1-201ENST00000340650 GLI3P10071 1580 aa23.74■■□□□ 1.39
NHLRC1-201ENST00000340650 MBD3O95983 291 aa23.74■■□□□ 1.39
NHLRC1-201ENST00000340650 XAGE3Q8WTP9 111 aa23.74■■□□□ 1.39
NHLRC1-201ENST00000340650 CCDC9Q9Y3X0 531 aaKnown RBP23.74■■□□□ 1.39
NHLRC1-201ENST00000340650 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
NHLRC1-201ENST00000340650 NBPF7P0C2Y1 421 aaPredicted RBP23.73■■□□□ 1.39
NHLRC1-201ENST00000340650 DDX58O95786 925 aaKnown RBP23.72■■□□□ 1.39
NHLRC1-201ENST00000340650 COPS6Q7L5N1 327 aa23.72■■□□□ 1.39
NHLRC1-201ENST00000340650 PNMA6EA0A0J9YXQ4 647 aa23.72■■□□□ 1.39
NHLRC1-201ENST00000340650 HMMRO75330 724 aa23.72■■□□□ 1.39
NHLRC1-201ENST00000340650 MCM2P49736 904 aa23.72■■□□□ 1.39
NHLRC1-201ENST00000340650 CWF19L2Q2TBE0 894 aaKnown RBP23.72■■□□□ 1.39
NHLRC1-201ENST00000340650 PIGBQ92521 554 aa23.71■■□□□ 1.39
NHLRC1-201ENST00000340650 NRAPQ86VF7 1730 aa23.71■■□□□ 1.39
NHLRC1-201ENST00000340650 RIC3Q7Z5B4 369 aa23.71■■□□□ 1.39
NHLRC1-201ENST00000340650 R3HCC1Q9Y3T6 440 aaKnown RBP23.71■■□□□ 1.39
NHLRC1-201ENST00000340650 KCPQ6ZWJ8 1503 aa23.71■■□□□ 1.39
NHLRC1-201ENST00000340650 SYCE3A1L190 88 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 PDE1AP54750 535 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 CUL4AQ13619 759 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 CSPP1Q1MSJ5 1256 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 LRP10Q7Z4F1 713 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 TMX3Q96JJ7 454 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 C8orf37Q96NL8 207 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 CCDC39Q9UFE4 941 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 ASAP1Q9ULH1 1129 aa23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 NSFL1CQ9UNZ2 370 aaKnown RBP23.7■■□□□ 1.38
NHLRC1-201ENST00000340650 BRD1O95696 1058 aa23.69■■□□□ 1.38
NHLRC1-201ENST00000340650 TUBGCP6Q96RT7 1819 aa23.69■■□□□ 1.38
NHLRC1-201ENST00000340650 SYTL4Q96C24 671 aaPredicted RBP23.69■■□□□ 1.38
NHLRC1-201ENST00000340650 MAP7D2Q96T17 732 aa23.68■■□□□ 1.38
NHLRC1-201ENST00000340650 ATP8B2P98198 1209 aa23.68■■□□□ 1.38
NHLRC1-201ENST00000340650 EXOC6BQ9Y2D4 811 aa23.68■■□□□ 1.38
NHLRC1-201ENST00000340650 SLIT2O94813 1529 aa23.68■■□□□ 1.38
NHLRC1-201ENST00000340650 PAPPAQ13219 1627 aa23.68■■□□□ 1.38
NHLRC1-201ENST00000340650 NEK4P51957 841 aa23.67■■□□□ 1.38
NHLRC1-201ENST00000340650 SPATA31A5Q5VU36 1347 aa23.67■■□□□ 1.38
NHLRC1-201ENST00000340650 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms