RNA–Protein interactions for RNA: ENST00000339877.8

RBPMS-203, Transcript of RNA binding protein, mRNA processing factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBPMS, Length 1,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-203ENST00000339877 MKRN1Q9UHC7 482 aaKnown RBP23.08■■□□□ 1.29
RBPMS-203ENST00000339877 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.29
RBPMS-203ENST00000339877 PER1O15534 1290 aaPredicted RBP23.08■■□□□ 1.28
RBPMS-203ENST00000339877 DZIP3Q86Y13 1208 aaKnown RBP23.08■■□□□ 1.28
RBPMS-203ENST00000339877 POTEIP0CG38 1075 aa23.07■■□□□ 1.28
RBPMS-203ENST00000339877 POTEJP0CG39 1038 aa23.07■■□□□ 1.28
RBPMS-203ENST00000339877 SLX4Q8IY92 1834 aa23.05■■□□□ 1.28
RBPMS-203ENST00000339877 BTBD11A6QL63 1104 aa23.05■■□□□ 1.28
RBPMS-203ENST00000339877 LDHDQ86WU2 507 aa23.05■■□□□ 1.28
RBPMS-203ENST00000339877 SIPA1L3O60292 1781 aaPredicted RBP23.04■■□□□ 1.28
RBPMS-203ENST00000339877 CLEC4GQ6UXB4 293 aa23.04■■□□□ 1.28
RBPMS-203ENST00000339877 NBPF5PQ86XG9 351 aaPredicted RBP23.04■■□□□ 1.28
RBPMS-203ENST00000339877 CCDC93Q567U6 631 aa23.03■■□□□ 1.28
RBPMS-203ENST00000339877 L3MBTL3Q96JM7 780 aaPredicted RBP23.03■■□□□ 1.28
RBPMS-203ENST00000339877 ZNF652Q9Y2D9 606 aa23.03■■□□□ 1.28
RBPMS-203ENST00000339877 CNTNAP1P78357 1384 aa23.02■■□□□ 1.28
RBPMS-203ENST00000339877 CEMIPQ8WUJ3 1361 aa23.02■■□□□ 1.28
RBPMS-203ENST00000339877 CACNA1SQ13698 1873 aa23.02■■□□□ 1.28
RBPMS-203ENST00000339877 TAF1DQ9H5J8 278 aaPredicted RBP23.02■■□□□ 1.28
RBPMS-203ENST00000339877 USP16Q9Y5T5 823 aa23.02■■□□□ 1.28
RBPMS-203ENST00000339877 ARFGEF2Q9Y6D5 1785 aa23.01■■□□□ 1.27
RBPMS-203ENST00000339877 KCNQ3O43525 872 aa23.01■■□□□ 1.27
RBPMS-203ENST00000339877 NPR1P16066 1061 aa23.01■■□□□ 1.27
RBPMS-203ENST00000339877 C7orf43Q8WVR3 580 aa23.01■■□□□ 1.27
RBPMS-203ENST00000339877 COL3A1P02461 1466 aaPredicted RBP23.01■■□□□ 1.27
RBPMS-203ENST00000339877 PASKQ96RG2 1323 aa23■■□□□ 1.27
RBPMS-203ENST00000339877 FKBP4Q02790 459 aaKnown RBP eCLIP23■■□□□ 1.27
RBPMS-203ENST00000339877 SCN4AP35499 1836 aa22.99■■□□□ 1.27
RBPMS-203ENST00000339877 BCORQ6W2J9 1755 aa22.99■■□□□ 1.27
RBPMS-203ENST00000339877 TMEM88BA6NKF7 163 aa22.99■■□□□ 1.27
RBPMS-203ENST00000339877 FOXN1O15353 648 aa22.99■■□□□ 1.27
RBPMS-203ENST00000339877 CNGB1Q14028 1251 aaPredicted RBP22.99■■□□□ 1.27
RBPMS-203ENST00000339877 TPTE2Q6XPS3 522 aa22.99■■□□□ 1.27
RBPMS-203ENST00000339877 NPC1L1Q9UHC9 1359 aa22.99■■□□□ 1.27
RBPMS-203ENST00000339877 PIP4K2AP48426 406 aaPredicted RBP22.98■■□□□ 1.27
RBPMS-203ENST00000339877 EAPPQ56P03 285 aaPredicted RBP22.98■■□□□ 1.27
RBPMS-203ENST00000339877 AIDAQ96BJ3 306 aa22.98■■□□□ 1.27
RBPMS-203ENST00000339877 PRDM10Q9NQV6 1147 aa22.98■■□□□ 1.27
RBPMS-203ENST00000339877 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
RBPMS-203ENST00000339877 RTKN2Q8IZC4 609 aa22.97■■□□□ 1.27
RBPMS-203ENST00000339877 PHACTR3Q96KR7 559 aa22.97■■□□□ 1.27
RBPMS-203ENST00000339877 HACL1Q9UJ83 578 aa22.97■■□□□ 1.27
RBPMS-203ENST00000339877 CLEC11AQ9Y240 323 aa22.97■■□□□ 1.27
RBPMS-203ENST00000339877 KLRG2A4D1S0 409 aaPredicted RBP22.96■■□□□ 1.27
RBPMS-203ENST00000339877 PRKAR2BP31323 418 aa22.96■■□□□ 1.27
RBPMS-203ENST00000339877 ZNF277Q9NRM2 450 aaPredicted RBP22.96■■□□□ 1.27
RBPMS-203ENST00000339877 RGL2O15211 777 aa22.95■■□□□ 1.26
RBPMS-203ENST00000339877 ITGBL1O95965 494 aaPredicted RBP22.95■■□□□ 1.26
RBPMS-203ENST00000339877 CTCFP49711 727 aaPredicted RBP22.95■■□□□ 1.26
RBPMS-203ENST00000339877 RTF1Q92541 710 aaKnown RBP22.95■■□□□ 1.26
RBPMS-203ENST00000339877 CFAP53Q96M91 514 aa22.95■■□□□ 1.26
RBPMS-203ENST00000339877 NIP7Q9Y221 180 aaKnown RBP eCLIP22.95■■□□□ 1.26
RBPMS-203ENST00000339877 PRAMEF22A3QJZ6 481 aa22.94■■□□□ 1.26
RBPMS-203ENST00000339877 ALDH1B1P30837 517 aa22.94■■□□□ 1.26
RBPMS-203ENST00000339877 VEGFBP49765 207 aa22.94■■□□□ 1.26
RBPMS-203ENST00000339877 PNMA8AQ86V59 439 aaPredicted RBP22.94■■□□□ 1.26
RBPMS-203ENST00000339877 ZNF541Q9H0D2 1346 aa22.94■■□□□ 1.26
RBPMS-203ENST00000339877 EPHX2P34913 555 aa22.93■■□□□ 1.26
RBPMS-203ENST00000339877 RSPH6AQ9H0K4 717 aa22.93■■□□□ 1.26
RBPMS-203ENST00000339877 NUDCQ9Y266 331 aa22.93■■□□□ 1.26
RBPMS-203ENST00000339877 GTF2E1P29083 439 aaPredicted RBP22.92■■□□□ 1.26
RBPMS-203ENST00000339877 FAM177BA6PVY3 158 aa22.91■■□□□ 1.26
RBPMS-203ENST00000339877 IARSP41252 1262 aaKnown RBP22.91■■□□□ 1.26
RBPMS-203ENST00000339877 FZD9O00144 591 aa22.9■■□□□ 1.26
RBPMS-203ENST00000339877 OLFM4Q6UX06 510 aa22.9■■□□□ 1.26
RBPMS-203ENST00000339877 MCM10Q7L590 875 aa22.9■■□□□ 1.26
RBPMS-203ENST00000339877 SYNE4Q8N205 404 aa22.9■■□□□ 1.26
RBPMS-203ENST00000339877 WBP1LQ9NX94 342 aa22.9■■□□□ 1.26
RBPMS-203ENST00000339877 DEFB115Q30KQ5 88 aa22.89■■□□□ 1.26
RBPMS-203ENST00000339877 CNTROBQ8N137 903 aa22.89■■□□□ 1.26
RBPMS-203ENST00000339877 GPC2Q8N158 579 aa22.89■■□□□ 1.26
RBPMS-203ENST00000339877 JDP2Q8WYK2 163 aa22.89■■□□□ 1.26
RBPMS-203ENST00000339877 RNF123Q5XPI4 1314 aa22.89■■□□□ 1.25
RBPMS-203ENST00000339877 NBPF26B4DH59 902 aa22.88■■□□□ 1.25
RBPMS-203ENST00000339877 NBPF10Q6P3W6 841 aaKnown RBP22.88■■□□□ 1.25
RBPMS-203ENST00000339877 NBPF15Q8N660 670 aa22.88■■□□□ 1.25
RBPMS-203ENST00000339877 RASSF10A6NK89 507 aa22.87■■□□□ 1.25
RBPMS-203ENST00000339877 MAP1SQ66K74 1059 aaPredicted RBP22.87■■□□□ 1.25
RBPMS-203ENST00000339877 PSMD1Q99460 953 aa22.87■■□□□ 1.25
RBPMS-203ENST00000339877 HTATSF1O43719 755 aaKnown RBP22.86■■□□□ 1.25
RBPMS-203ENST00000339877 U2AF1L5P0DN76 240 aaPredicted RBP22.86■■□□□ 1.25
RBPMS-203ENST00000339877 LBX1P52954 281 aa22.86■■□□□ 1.25
RBPMS-203ENST00000339877 U2AF1Q01081 240 aaKnown RBP eCLIP22.86■■□□□ 1.258e-8■■■□□ 16.3
RBPMS-203ENST00000339877 NYXQ9GZU5 481 aa22.86■■□□□ 1.25
RBPMS-203ENST00000339877 HLFQ16534 295 aa22.85■■□□□ 1.25
RBPMS-203ENST00000339877 CC2D2BQ6DHV5 1058 aa22.85■■□□□ 1.25
RBPMS-203ENST00000339877 ADAMTSL1Q8N6G6 1762 aa22.85■■□□□ 1.25
RBPMS-203ENST00000339877 EIF6P56537 245 aaKnown RBP22.84■■□□□ 1.25
RBPMS-203ENST00000339877 MAP2K1Q02750 393 aaPredicted RBP22.84■■□□□ 1.25
RBPMS-203ENST00000339877 TAF7Q15545 349 aaPredicted RBP22.84■■□□□ 1.25
RBPMS-203ENST00000339877 ABT1Q9ULW3 272 aaKnown RBP22.84■■□□□ 1.25
RBPMS-203ENST00000339877 DCTN1Q14203 1278 aa22.83■■□□□ 1.25
RBPMS-203ENST00000339877 WDR33Q9C0J8 1336 aaKnown RBP22.83■■□□□ 1.25
RBPMS-203ENST00000339877 LMOD1P29536 600 aaPredicted RBP22.82■■□□□ 1.24
RBPMS-203ENST00000339877 CRY2Q49AN0 593 aa22.82■■□□□ 1.24
RBPMS-203ENST00000339877 GRIPAP1Q4V328 841 aa22.82■■□□□ 1.24
RBPMS-203ENST00000339877 GJA3Q9Y6H8 435 aa22.82■■□□□ 1.24
RBPMS-203ENST00000339877 RPGRQ92834 1020 aaKnown RBP22.82■■□□□ 1.24
RBPMS-203ENST00000339877 ERVV-1B6SEH8 477 aa22.81■■□□□ 1.24
RBPMS-203ENST00000339877 NGEFQ8N5V2 710 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms