RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
SRSF3-201ENST00000339436 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
SRSF3-201ENST00000339436 SLFN5Q08AF3 891 aa16.59■□□□□ 0.25
SRSF3-201ENST00000339436 RGL2O15211 777 aa16.58■□□□□ 0.24
SRSF3-201ENST00000339436 TTLL7Q6ZT98 887 aa16.58■□□□□ 0.24
SRSF3-201ENST00000339436 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.24
SRSF3-201ENST00000339436 CHMP4AQ9BY43 222 aa16.58■□□□□ 0.24
SRSF3-201ENST00000339436 UTRNP46939 3433 aa16.58■□□□□ 0.24
SRSF3-201ENST00000339436 MAP3K15Q6ZN16 1313 aa16.57■□□□□ 0.24
SRSF3-201ENST00000339436 ANKRD31Q8N7Z5 1873 aa16.57■□□□□ 0.24
SRSF3-201ENST00000339436 DDR1Q08345 913 aa16.57■□□□□ 0.24
SRSF3-201ENST00000339436 CCDC30Q5VVM6 783 aa16.57■□□□□ 0.24
SRSF3-201ENST00000339436 KIF6Q6ZMV9 814 aa16.57■□□□□ 0.24
SRSF3-201ENST00000339436 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
SRSF3-201ENST00000339436 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
SRSF3-201ENST00000339436 NFIXQ14938 502 aa16.56■□□□□ 0.24
SRSF3-201ENST00000339436 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
SRSF3-201ENST00000339436 C10orf71Q711Q0 1435 aa16.56■□□□□ 0.24
SRSF3-201ENST00000339436 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
SRSF3-201ENST00000339436 ERVV-1B6SEH8 477 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 TM4SF1P30408 202 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
SRSF3-201ENST00000339436 XAGE3Q8WTP9 111 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 HYPKQ9NX55 129 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 CARMIL3Q8ND23 1372 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 N4BP2Q86UW6 1770 aaPredicted RBP16.55■□□□□ 0.24
SRSF3-201ENST00000339436 DLEC1Q9Y238 1755 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
SRSF3-201ENST00000339436 VAMP4O75379 141 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
SRSF3-201ENST00000339436 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
SRSF3-201ENST00000339436 HLFQ16534 295 aa16.54■□□□□ 0.24
SRSF3-201ENST00000339436 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
SRSF3-201ENST00000339436 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
SRSF3-201ENST00000339436 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
SRSF3-201ENST00000339436 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
SRSF3-201ENST00000339436 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.24
SRSF3-201ENST00000339436 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
SRSF3-201ENST00000339436 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
SRSF3-201ENST00000339436 GIGYF2Q6Y7W6 1299 aaKnown RBP16.51■□□□□ 0.23
SRSF3-201ENST00000339436 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
SRSF3-201ENST00000339436 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
SRSF3-201ENST00000339436 SETDB2Q96T68 719 aa16.5■□□□□ 0.23
SRSF3-201ENST00000339436 SYT17Q9BSW7 474 aa16.5■□□□□ 0.23
SRSF3-201ENST00000339436 NIP7Q9Y221 180 aaKnown RBP eCLIP16.5■□□□□ 0.23
SRSF3-201ENST00000339436 CD2APQ9Y5K6 639 aa16.5■□□□□ 0.23
SRSF3-201ENST00000339436 LAMB2P55268 1798 aa16.5■□□□□ 0.23
SRSF3-201ENST00000339436 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
SRSF3-201ENST00000339436 SERPINB2P05120 415 aa16.5■□□□□ 0.23
SRSF3-201ENST00000339436 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
SRSF3-201ENST00000339436 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
SRSF3-201ENST00000339436 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
SRSF3-201ENST00000339436 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
SRSF3-201ENST00000339436 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
SRSF3-201ENST00000339436 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
SRSF3-201ENST00000339436 ANKRD13DQ6ZTN6 518 aa16.49■□□□□ 0.23
SRSF3-201ENST00000339436 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
SRSF3-201ENST00000339436 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
SRSF3-201ENST00000339436 GPTP24298 496 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 FLIIQ13045 1269 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 G2E3Q7L622 706 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 CNBD1Q8NA66 436 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 NLGN2Q8NFZ4 835 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 DDX60Q8IY21 1712 aaKnown RBP16.47■□□□□ 0.23
SRSF3-201ENST00000339436 ADCY9O60503 1353 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
SRSF3-201ENST00000339436 DDX58O95786 925 aaKnown RBP16.46■□□□□ 0.23
SRSF3-201ENST00000339436 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
SRSF3-201ENST00000339436 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
SRSF3-201ENST00000339436 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
SRSF3-201ENST00000339436 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
SRSF3-201ENST00000339436 MYH3P11055 1940 aa16.45■□□□□ 0.22
SRSF3-201ENST00000339436 PARP10Q53GL7 1025 aa16.45■□□□□ 0.22
SRSF3-201ENST00000339436 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
SRSF3-201ENST00000339436 RIC1Q4ADV7 1423 aa16.44■□□□□ 0.22
SRSF3-201ENST00000339436 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
SRSF3-201ENST00000339436 KSR2Q6VAB6 950 aa16.44■□□□□ 0.22
SRSF3-201ENST00000339436 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
SRSF3-201ENST00000339436 MAP3K2Q9Y2U5 619 aa16.44■□□□□ 0.22
SRSF3-201ENST00000339436 PI4KAP2A4QPH2 592 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 NPHP1O15259 732 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 NTSR2O95665 410 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 ST5P78524 1137 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 ALDH1L2Q3SY69 923 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 NLRP10Q86W26 655 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 PI4KAP1Q8N8J0 262 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
SRSF3-201ENST00000339436 TGFB2P61812 414 aa16.42■□□□□ 0.22
SRSF3-201ENST00000339436 SUSD4Q5VX71 490 aa16.42■□□□□ 0.22
SRSF3-201ENST00000339436 TPTE2Q6XPS3 522 aa16.42■□□□□ 0.22
SRSF3-201ENST00000339436 CCDC24Q8N4L8 307 aa16.42■□□□□ 0.22
SRSF3-201ENST00000339436 METTL22Q9BUU2 404 aaPredicted RBP16.42■□□□□ 0.22
SRSF3-201ENST00000339436 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
SRSF3-201ENST00000339436 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms