RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 PDIA6Q15084 440 aa17.26■□□□□ 0.35
LIPA-202ENST00000336233 CLASRPQ8N2M8 674 aaKnown RBP17.26■□□□□ 0.35
LIPA-202ENST00000336233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.26■□□□□ 0.35
LIPA-202ENST00000336233 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
LIPA-202ENST00000336233 ECHDC1Q9NTX5 307 aa17.25■□□□□ 0.35
LIPA-202ENST00000336233 GRM8O00222 908 aa17.25■□□□□ 0.35
LIPA-202ENST00000336233 ZSCAN23Q3MJ62 389 aa17.25■□□□□ 0.35
LIPA-202ENST00000336233 GPATCH3Q96I76 525 aa17.25■□□□□ 0.35
LIPA-202ENST00000336233 OS9Q13438 667 aaPredicted RBP17.24■□□□□ 0.35
LIPA-202ENST00000336233 TTC14Q96N46 770 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 PPP1R9BQ96SB3 815 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 SNX14Q9Y5W7 946 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 NPHP3Q7Z494 1330 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
LIPA-202ENST00000336233 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 MAP4K4O95819 1239 aaPredicted RBP17.24■□□□□ 0.35
LIPA-202ENST00000336233 CLCN1P35523 988 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 SLC52A2Q9HAB3 445 aa17.24■□□□□ 0.35
LIPA-202ENST00000336233 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 RUFY2Q8WXA3 655 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 KCNB2Q92953 911 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 MEGF6O75095 1541 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 PRPF40AO75400 957 aaKnown RBP17.23■□□□□ 0.35
LIPA-202ENST00000336233 CCDC173Q0VFZ6 552 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 CWF19L2Q2TBE0 894 aaKnown RBP17.23■□□□□ 0.35
LIPA-202ENST00000336233 CAVIN1Q6NZI2 390 aaKnown RBP17.23■□□□□ 0.35
LIPA-202ENST00000336233 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 KAZALD1Q96I82 304 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 UPF3BQ9BZI7 483 aaKnown RBP17.23■□□□□ 0.35
LIPA-202ENST00000336233 MBD3O95983 291 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
LIPA-202ENST00000336233 PHKG2P15735 406 aa17.22■□□□□ 0.35
LIPA-202ENST00000336233 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
LIPA-202ENST00000336233 KIAA1211Q6ZU35 1233 aa17.22■□□□□ 0.35
LIPA-202ENST00000336233 SPG7Q9UQ90 795 aa17.22■□□□□ 0.35
LIPA-202ENST00000336233 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
LIPA-202ENST00000336233 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
LIPA-202ENST00000336233 EVI5LQ96CN4 794 aa17.21■□□□□ 0.35
LIPA-202ENST00000336233 COL15A1P39059 1388 aa17.21■□□□□ 0.35
LIPA-202ENST00000336233 PDIA4P13667 645 aaKnown RBP17.21■□□□□ 0.35
LIPA-202ENST00000336233 TATP17735 454 aaPredicted RBP17.21■□□□□ 0.35
LIPA-202ENST00000336233 SNRKQ9NRH2 765 aa17.21■□□□□ 0.35
LIPA-202ENST00000336233 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
LIPA-202ENST00000336233 GLI3P10071 1580 aa17.21■□□□□ 0.34
LIPA-202ENST00000336233 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
LIPA-202ENST00000336233 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
LIPA-202ENST00000336233 WDR33Q9C0J8 1336 aaKnown RBP17.2■□□□□ 0.34
LIPA-202ENST00000336233 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
LIPA-202ENST00000336233 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
LIPA-202ENST00000336233 PA2G4Q9UQ80 394 aaKnown RBP17.2■□□□□ 0.34
LIPA-202ENST00000336233 TNS3Q68CZ2 1445 aa17.2■□□□□ 0.34
LIPA-202ENST00000336233 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
LIPA-202ENST00000336233 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
LIPA-202ENST00000336233 RPAP1Q9BWH6 1393 aaPredicted RBP17.19■□□□□ 0.34
LIPA-202ENST00000336233 HIP1O00291 1037 aa17.19■□□□□ 0.34
LIPA-202ENST00000336233 RASEFQ8IZ41 740 aa17.19■□□□□ 0.34
LIPA-202ENST00000336233 SASH1O94885 1247 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 NCLP19338 710 aaKnown RBP17.18■□□□□ 0.34
LIPA-202ENST00000336233 ZC3H6P61129 1189 aaKnown RBP17.18■□□□□ 0.34
LIPA-202ENST00000336233 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
LIPA-202ENST00000336233 AACSQ86V21 672 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 ESPNB1AK53 854 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 LRP10Q7Z4F1 713 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 IFNL2Q8IZJ0 200 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 ARFGEF2Q9Y6D5 1785 aa17.18■□□□□ 0.34
LIPA-202ENST00000336233 METTL22Q9BUU2 404 aaPredicted RBP17.17■□□□□ 0.34
LIPA-202ENST00000336233 NLRP2Q9NX02 1062 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 AK2P54819 239 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
LIPA-202ENST00000336233 NOL8Q76FK4 1167 aaKnown RBP17.17■□□□□ 0.34
LIPA-202ENST00000336233 TMEM87AQ8NBN3 555 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 CPDO75976 1380 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 TMEM94Q12767 1356 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 GCKRQ14397 625 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 RUFY3Q7L099 469 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
LIPA-202ENST00000336233 TMEM63CQ9P1W3 806 aa17.17■□□□□ 0.34
LIPA-202ENST00000336233 ATF3P18847 181 aa17.16■□□□□ 0.34
LIPA-202ENST00000336233 LRSAM1Q6UWE0 723 aa17.16■□□□□ 0.34
LIPA-202ENST00000336233 ANP32BQ92688 251 aaKnown RBP17.16■□□□□ 0.34
LIPA-202ENST00000336233 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
LIPA-202ENST00000336233 BCL11BQ9C0K0 894 aaPredicted RBP17.16■□□□□ 0.34
LIPA-202ENST00000336233 AFDNP55196 1824 aaKnown RBP17.16■□□□□ 0.34
LIPA-202ENST00000336233 SLC39A6Q13433 755 aa17.16■□□□□ 0.34
LIPA-202ENST00000336233 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
LIPA-202ENST00000336233 EAF2Q96CJ1 260 aaPredicted RBP17.16■□□□□ 0.34
LIPA-202ENST00000336233 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 JCADQ9P266 1359 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
LIPA-202ENST00000336233 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 CHAMP1Q96JM3 812 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 RBM27Q9P2N5 1060 aaKnown RBP17.15■□□□□ 0.34
LIPA-202ENST00000336233 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms