RNA–Protein interactions for RNA: ENST00000334418.5

CCDC84-201, Transcript of coiled-coil domain containing 84, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC84, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-201ENST00000334418 KLHL34Q8N239 644 aa20.78■□□□□ 0.92
CCDC84-201ENST00000334418 TBC1D2BQ9UPU7 963 aa20.78■□□□□ 0.92
CCDC84-201ENST00000334418 ZNF652Q9Y2D9 606 aa20.78■□□□□ 0.92
CCDC84-201ENST00000334418 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
CCDC84-201ENST00000334418 LRP10Q7Z4F1 713 aa20.77■□□□□ 0.92
CCDC84-201ENST00000334418 XAGE3Q8WTP9 111 aa20.77■□□□□ 0.92
CCDC84-201ENST00000334418 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
CCDC84-201ENST00000334418 AIMP1Q12904 312 aaKnown RBP20.76■□□□□ 0.91
CCDC84-201ENST00000334418 ALDH1L2Q3SY69 923 aa20.76■□□□□ 0.91
CCDC84-201ENST00000334418 USPL1Q5W0Q7 1092 aa20.76■□□□□ 0.91
CCDC84-201ENST00000334418 COPS6Q7L5N1 327 aa20.76■□□□□ 0.91
CCDC84-201ENST00000334418 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
CCDC84-201ENST00000334418 MAP3K15Q6ZN16 1313 aa20.76■□□□□ 0.91
CCDC84-201ENST00000334418 RGL2O15211 777 aa20.75■□□□□ 0.91
CCDC84-201ENST00000334418 DDX58O95786 925 aaKnown RBP20.75■□□□□ 0.91
CCDC84-201ENST00000334418 MSL1Q68DK7 614 aa20.75■□□□□ 0.91
CCDC84-201ENST00000334418 ERVV-1B6SEH8 477 aa20.74■□□□□ 0.91
CCDC84-201ENST00000334418 CAMTA2O94983 1202 aa20.74■□□□□ 0.91
CCDC84-201ENST00000334418 GYS1P13807 737 aa20.74■□□□□ 0.91
CCDC84-201ENST00000334418 TTLL7Q6ZT98 887 aa20.74■□□□□ 0.91
CCDC84-201ENST00000334418 NLGN1Q8N2Q7 840 aa20.74■□□□□ 0.91
CCDC84-201ENST00000334418 SMC4Q9NTJ3 1288 aa20.74■□□□□ 0.91
CCDC84-201ENST00000334418 ARFGEF2Q9Y6D5 1785 aa20.73■□□□□ 0.91
CCDC84-201ENST00000334418 NUP98P52948 1817 aa20.73■□□□□ 0.91
CCDC84-201ENST00000334418 COL24A1Q17RW2 1714 aa20.73■□□□□ 0.91
CCDC84-201ENST00000334418 FLIIQ13045 1269 aa20.72■□□□□ 0.91
CCDC84-201ENST00000334418 CLEC4GQ6UXB4 293 aa20.72■□□□□ 0.91
CCDC84-201ENST00000334418 SSH1Q8WYL5 1049 aa20.72■□□□□ 0.91
CCDC84-201ENST00000334418 ZBTB3Q9H5J0 574 aa20.72■□□□□ 0.91
CCDC84-201ENST00000334418 PHAXQ9H814 394 aaKnown RBP20.72■□□□□ 0.91
CCDC84-201ENST00000334418 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
CCDC84-201ENST00000334418 HSP90AB3PQ58FF7 597 aa20.71■□□□□ 0.91
CCDC84-201ENST00000334418 PLBD2Q8NHP8 589 aa20.71■□□□□ 0.91
CCDC84-201ENST00000334418 FKBP5Q13451 457 aaPredicted RBP20.7■□□□□ 0.9
CCDC84-201ENST00000334418 FKBP8Q14318 412 aa20.7■□□□□ 0.9
CCDC84-201ENST00000334418 ANKRD13DQ6ZTN6 518 aa20.7■□□□□ 0.9
CCDC84-201ENST00000334418 RIC3Q7Z5B4 369 aa20.7■□□□□ 0.9
CCDC84-201ENST00000334418 BCL2L13Q9BXK5 485 aa20.7■□□□□ 0.9
CCDC84-201ENST00000334418 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
CCDC84-201ENST00000334418 RARSP54136 660 aaKnown RBP20.69■□□□□ 0.9
CCDC84-201ENST00000334418 GIGYF2Q6Y7W6 1299 aaKnown RBP20.69■□□□□ 0.9
CCDC84-201ENST00000334418 MRPL50Q8N5N7 158 aaKnown RBP20.69■□□□□ 0.9
CCDC84-201ENST00000334418 BCL2L12Q9HB09 334 aa20.69■□□□□ 0.9
CCDC84-201ENST00000334418 ATP10DQ9P241 1426 aa20.69■□□□□ 0.9
CCDC84-201ENST00000334418 PTPRCP08575 1304 aa20.68■□□□□ 0.9
CCDC84-201ENST00000334418 MMP10P09238 476 aa20.67■□□□□ 0.9
CCDC84-201ENST00000334418 HLFQ16534 295 aa20.67■□□□□ 0.9
CCDC84-201ENST00000334418 G2E3Q7L622 706 aa20.67■□□□□ 0.9
CCDC84-201ENST00000334418 CARMIL3Q8ND23 1372 aa20.67■□□□□ 0.9
CCDC84-201ENST00000334418 TBC1D9BQ66K14 1250 aa20.66■□□□□ 0.9
CCDC84-201ENST00000334418 KSR2Q6VAB6 950 aa20.66■□□□□ 0.9
CCDC84-201ENST00000334418 BICDL1Q6ZP65 573 aa20.66■□□□□ 0.9
CCDC84-201ENST00000334418 SETDB2Q96T68 719 aa20.66■□□□□ 0.9
CCDC84-201ENST00000334418 PARP3Q9Y6F1 533 aa20.66■□□□□ 0.9
CCDC84-201ENST00000334418 PI4KAP2A4QPH2 592 aa20.65■□□□□ 0.9
CCDC84-201ENST00000334418 BRPF1P55201 1214 aaPredicted RBP20.65■□□□□ 0.9
CCDC84-201ENST00000334418 NEXNQ0ZGT2 675 aa20.65■□□□□ 0.9
CCDC84-201ENST00000334418 NFIXQ14938 502 aa20.65■□□□□ 0.9
CCDC84-201ENST00000334418 PI4KAP1Q8N8J0 262 aa20.65■□□□□ 0.9
CCDC84-201ENST00000334418 NIP7Q9Y221 180 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCDC84-201ENST00000334418 MAP3K2Q9Y2U5 619 aa20.65■□□□□ 0.9
CCDC84-201ENST00000334418 ADCY9O60503 1353 aa20.64■□□□□ 0.89
CCDC84-201ENST00000334418 GPR162Q16538 588 aa20.64■□□□□ 0.89
CCDC84-201ENST00000334418 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
CCDC84-201ENST00000334418 NLGN2Q8NFZ4 835 aa20.64■□□□□ 0.89
CCDC84-201ENST00000334418 NPHP1O15259 732 aa20.63■□□□□ 0.89
CCDC84-201ENST00000334418 TCIRG1Q13488 830 aa20.63■□□□□ 0.89
CCDC84-201ENST00000334418 PARP10Q53GL7 1025 aa20.63■□□□□ 0.89
CCDC84-201ENST00000334418 RCAN3Q9UKA8 241 aa20.63■□□□□ 0.89
CCDC84-201ENST00000334418 AFDNP55196 1824 aaKnown RBP20.62■□□□□ 0.89
CCDC84-201ENST00000334418 GPTP24298 496 aa20.62■□□□□ 0.89
CCDC84-201ENST00000334418 TM4SF1P30408 202 aa20.62■□□□□ 0.89
CCDC84-201ENST00000334418 DNAAF4Q8WXU2 420 aa20.62■□□□□ 0.89
CCDC84-201ENST00000334418 METTL22Q9BUU2 404 aaPredicted RBP20.62■□□□□ 0.89
CCDC84-201ENST00000334418 IBTKQ9P2D0 1353 aaPredicted RBP20.61■□□□□ 0.89
CCDC84-201ENST00000334418 POLRMTO00411 1230 aaKnown RBP20.61■□□□□ 0.89
CCDC84-201ENST00000334418 IPO8O15397 1037 aaKnown RBP20.61■□□□□ 0.89
CCDC84-201ENST00000334418 DDR1Q08345 913 aa20.61■□□□□ 0.89
CCDC84-201ENST00000334418 MYD88Q99836 296 aa20.61■□□□□ 0.89
CCDC84-201ENST00000334418 API5Q9BZZ5 524 aaKnown RBP20.61■□□□□ 0.89
CCDC84-201ENST00000334418 PXDNLA1KZ92 1463 aa20.61■□□□□ 0.89
CCDC84-201ENST00000334418 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
CCDC84-201ENST00000334418 BCAR3O75815 825 aa20.6■□□□□ 0.89
CCDC84-201ENST00000334418 SERPINB2P05120 415 aa20.6■□□□□ 0.89
CCDC84-201ENST00000334418 PPP1R42Q7Z4L9 355 aa20.6■□□□□ 0.89
CCDC84-201ENST00000334418 NBPF5PQ86XG9 351 aaPredicted RBP20.6■□□□□ 0.89
CCDC84-201ENST00000334418 ZNF34Q8IZ26 560 aa20.6■□□□□ 0.89
CCDC84-201ENST00000334418 NYXQ9GZU5 481 aa20.6■□□□□ 0.89
CCDC84-201ENST00000334418 NOB1Q9ULX3 412 aaKnown RBP20.6■□□□□ 0.89
CCDC84-201ENST00000334418 UBN2Q6ZU65 1347 aa20.59■□□□□ 0.89
CCDC84-201ENST00000334418 CNBD1Q8NA66 436 aa20.59■□□□□ 0.89
CCDC84-201ENST00000334418 FRAT1Q92837 279 aaPredicted RBP20.59■□□□□ 0.89
CCDC84-201ENST00000334418 RNF123Q5XPI4 1314 aa20.58■□□□□ 0.89
CCDC84-201ENST00000334418 ST5P78524 1137 aa20.58■□□□□ 0.89
CCDC84-201ENST00000334418 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.89
CCDC84-201ENST00000334418 ISCA1Q9BUE6 129 aa20.58■□□□□ 0.89
CCDC84-201ENST00000334418 N4BP2Q86UW6 1770 aaPredicted RBP20.58■□□□□ 0.89
CCDC84-201ENST00000334418 F6X3S4 739 aa20.57■□□□□ 0.88
CCDC84-201ENST00000334418 ATP5J2-PTCD1G3V325 749 aa20.57■□□□□ 0.88
CCDC84-201ENST00000334418 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms