RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 PRR5LQ6MZQ0 368 aa8.5□□□□□ -1.05
USP16-201ENST00000334352 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
USP16-201ENST00000334352 EIF4A1P60842 406 aaKnown RBP8.49□□□□□ -1.05
USP16-201ENST00000334352 PSMD1Q99460 953 aa8.49□□□□□ -1.05
USP16-201ENST00000334352 A0A0G2JLW4 131 aa8.49□□□□□ -1.05
USP16-201ENST00000334352 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
USP16-201ENST00000334352 CHMP4AQ9BY43 222 aa8.49□□□□□ -1.05
USP16-201ENST00000334352 CACNA1SQ13698 1873 aa8.49□□□□□ -1.05
USP16-201ENST00000334352 GLTPD2A6NH11 291 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 SRGNP10124 158 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 ST5P78524 1137 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 TBC1D9BQ66K14 1250 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 TMC4Q7Z404 712 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 ZNF34Q8IZ26 560 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 DNAJC5GQ8N7S2 189 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 RTF1Q92541 710 aaKnown RBP8.48□□□□□ -1.05
USP16-201ENST00000334352 CRAMP1Q96RY5 1269 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 MAP3K15Q6ZN16 1313 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 ZNF646O15015 1829 aaPredicted RBP8.48□□□□□ -1.05
USP16-201ENST00000334352 PARP10Q53GL7 1025 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 C2CD5Q86YS7 1000 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 SLC39A6Q13433 755 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 C9orf131Q5VYM1 1079 aa8.48□□□□□ -1.05
USP16-201ENST00000334352 CDHR2Q9BYE9 1310 aa8.47□□□□□ -1.05
USP16-201ENST00000334352 RTKN2Q8IZC4 609 aa8.47□□□□□ -1.05
USP16-201ENST00000334352 RTFDC1Q9BY42 306 aaPredicted RBP8.47□□□□□ -1.05
USP16-201ENST00000334352 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
USP16-201ENST00000334352 ALDH1B1P30837 517 aa8.47□□□□□ -1.05
USP16-201ENST00000334352 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
USP16-201ENST00000334352 NBPF15Q8N660 670 aa8.47□□□□□ -1.05
USP16-201ENST00000334352 SMC1BQ8NDV3 1235 aa8.47□□□□□ -1.05
USP16-201ENST00000334352 SETDB2Q96T68 719 aa8.47□□□□□ -1.05
USP16-201ENST00000334352 NFKBIEO00221 500 aa8.46□□□□□ -1.05
USP16-201ENST00000334352 TRIM28Q13263 835 aaKnown RBP8.46□□□□□ -1.05
USP16-201ENST00000334352 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.05
USP16-201ENST00000334352 CHL1O00533 1208 aa8.46□□□□□ -1.06
USP16-201ENST00000334352 ZNF853P0CG23 659 aa8.46□□□□□ -1.06
USP16-201ENST00000334352 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
USP16-201ENST00000334352 CCDC27Q2M243 656 aa8.46□□□□□ -1.06
USP16-201ENST00000334352 HSP90AB3PQ58FF7 597 aa8.46□□□□□ -1.06
USP16-201ENST00000334352 ARHGAP27Q6ZUM4 889 aa8.46□□□□□ -1.06
USP16-201ENST00000334352 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
USP16-201ENST00000334352 BCS1LQ9Y276 419 aa8.46□□□□□ -1.06
USP16-201ENST00000334352 TRPM7Q96QT4 1865 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
USP16-201ENST00000334352 MMP14P50281 582 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 TPTE2Q6XPS3 522 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 NGEFQ8N5V2 710 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 NEFMP07197 916 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 U2AF1L5P0DN76 240 aaPredicted RBP8.45□□□□□ -1.06
USP16-201ENST00000334352 PRELPP51888 382 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 U2AF1Q01081 240 aaKnown RBP eCLIP8.45□□□□□ -1.06
USP16-201ENST00000334352 CNBD1Q8NA66 436 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 USP16Q9Y5T5 823 aa8.45□□□□□ -1.06
USP16-201ENST00000334352 FZD9O00144 591 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 PDIA6Q15084 440 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 CCDC93Q567U6 631 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 GIGYF2Q6Y7W6 1299 aaKnown RBP8.44□□□□□ -1.06
USP16-201ENST00000334352 RUNDC1Q96C34 613 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 IL16Q14005 1332 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 POTECB2RU33 542 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 SMIM5Q71RC9 77 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 PASKQ96RG2 1323 aa8.44□□□□□ -1.06
USP16-201ENST00000334352 VEGFAP15692 232 aaPredicted RBP8.43□□□□□ -1.06
USP16-201ENST00000334352 CALD1Q05682 793 aaKnown RBP8.43□□□□□ -1.06
USP16-201ENST00000334352 RTL9Q8NET4 1388 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 A1BGP04217 495 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 TMPOP42166 694 aaKnown RBP8.43□□□□□ -1.06
USP16-201ENST00000334352 KCNQ3O43525 872 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 NTSR2O95665 410 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 CHRNA5P30532 468 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 KLRG1Q96E93 195 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 PGAP2Q9UHJ9 254 aa8.43□□□□□ -1.06
USP16-201ENST00000334352 A0A1B0GUL6 1792 aa8.42□□□□□ -1.06
USP16-201ENST00000334352 CANXP27824 592 aaKnown RBP8.42□□□□□ -1.06
USP16-201ENST00000334352 IQCA1LA6NCM1 817 aa8.42□□□□□ -1.06
USP16-201ENST00000334352 PPP1R42Q7Z4L9 355 aa8.42□□□□□ -1.06
USP16-201ENST00000334352 KLHL34Q8N239 644 aa8.42□□□□□ -1.06
USP16-201ENST00000334352 SUPT20HQ8NEM7 779 aa8.42□□□□□ -1.06
USP16-201ENST00000334352 TAOK3Q9H2K8 898 aa8.42□□□□□ -1.06
USP16-201ENST00000334352 RNF181Q9P0P0 153 aa8.42□□□□□ -1.06
USP16-201ENST00000334352 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 KIF6Q6ZMV9 814 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 PELP1Q8IZL8 1130 aaKnown RBP8.41□□□□□ -1.06
USP16-201ENST00000334352 DDX21Q9NR30 783 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP16-201ENST00000334352 ZBTB22O15209 634 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 PRPF40BQ6NWY9 871 aaKnown RBP8.41□□□□□ -1.06
USP16-201ENST00000334352 RBM17Q96I25 401 aaKnown RBP8.41□□□□□ -1.06
USP16-201ENST00000334352 HHIPL1Q96JK4 782 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 IFT57Q9NWB7 429 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 TRIM35Q9UPQ4 493 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 MYH3P11055 1940 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 MAPK8IP3Q9UPT6 1336 aa8.41□□□□□ -1.06
USP16-201ENST00000334352 HSP90B1P14625 803 aaKnown RBP8.4□□□□□ -1.06
USP16-201ENST00000334352 DPY19L2Q6NUT2 758 aa8.4□□□□□ -1.06
USP16-201ENST00000334352 MCM10Q7L590 875 aa8.4□□□□□ -1.06
USP16-201ENST00000334352 LDHDQ86WU2 507 aa8.4□□□□□ -1.06
USP16-201ENST00000334352 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms