RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MAP4K4O95819 1239 aaPredicted RBP21.21■□□□□ 0.99
DDX28-201ENST00000332395 MCCP23508 829 aa21.21■□□□□ 0.99
DDX28-201ENST00000332395 LRP10Q7Z4F1 713 aa21.21■□□□□ 0.99
DDX28-201ENST00000332395 BICC1Q9H694 974 aaKnown RBP21.21■□□□□ 0.99
DDX28-201ENST00000332395 TTC41PQ6P2S7 1318 aa21.21■□□□□ 0.99
DDX28-201ENST00000332395 TOM1L2Q6ZVM7 507 aa21.21■□□□□ 0.99
DDX28-201ENST00000332395 ERC1Q8IUD2 1116 aa21.21■□□□□ 0.99
DDX28-201ENST00000332395 CLASRPQ8N2M8 674 aaKnown RBP21.21■□□□□ 0.99
DDX28-201ENST00000332395 GBP4Q96PP9 640 aa21.21■□□□□ 0.99
DDX28-201ENST00000332395 NEURL1BA8MQ27 555 aa21.2■□□□□ 0.98
DDX28-201ENST00000332395 METTL22Q9BUU2 404 aaPredicted RBP21.2■□□□□ 0.98
DDX28-201ENST00000332395 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
DDX28-201ENST00000332395 GLI3P10071 1580 aa21.2■□□□□ 0.98
DDX28-201ENST00000332395 CNTROBQ8N137 903 aa21.2■□□□□ 0.98
DDX28-201ENST00000332395 PCDH11XQ9BZA7 1347 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 PCDH11YQ9BZA8 1340 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 TRAK2O60296 914 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 ANAPC15P60006 121 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 GCKRQ14397 625 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 ANKRD13DQ6ZTN6 518 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 FAM43AQ8N2R8 423 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 MYD88Q99836 296 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 IL25Q9H293 177 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 PALD1Q9ULE6 856 aa21.19■□□□□ 0.98
DDX28-201ENST00000332395 ABCA3Q99758 1704 aa21.18■□□□□ 0.98
DDX28-201ENST00000332395 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
DDX28-201ENST00000332395 EPB41L2O43491 1005 aaKnown RBP21.18■□□□□ 0.98
DDX28-201ENST00000332395 GLRX3O76003 335 aaKnown RBP21.18■□□□□ 0.98
DDX28-201ENST00000332395 PIP4K2AP48426 406 aaPredicted RBP21.18■□□□□ 0.98
DDX28-201ENST00000332395 ZCRB1Q8TBF4 217 aaKnown RBP21.18■□□□□ 0.98
DDX28-201ENST00000332395 KDM4FA0A1W2PPD8 638 aa21.17■□□□□ 0.98
DDX28-201ENST00000332395 SSFA2P28290 1259 aa21.17■□□□□ 0.98
DDX28-201ENST00000332395 NEK4P51957 841 aa21.17■□□□□ 0.98
DDX28-201ENST00000332395 IFIT2P09913 472 aaKnown RBP21.16■□□□□ 0.98
DDX28-201ENST00000332395 IL17RAQ96F46 866 aa21.16■□□□□ 0.98
DDX28-201ENST00000332395 ECHDC1Q9NTX5 307 aa21.16■□□□□ 0.98
DDX28-201ENST00000332395 GPATCH3Q96I76 525 aa21.15■□□□□ 0.98
DDX28-201ENST00000332395 SGSM2O43147 1006 aa21.14■□□□□ 0.98
DDX28-201ENST00000332395 G3BP1Q13283 466 aaKnown RBP eCLIP21.14■□□□□ 0.98
DDX28-201ENST00000332395 CWC22Q9HCG8 908 aaKnown RBP21.14■□□□□ 0.98
DDX28-201ENST00000332395 ARFGEF2Q9Y6D5 1785 aa21.14■□□□□ 0.98
DDX28-201ENST00000332395 SASH1O94885 1247 aa21.14■□□□□ 0.97
DDX28-201ENST00000332395 AACSQ86V21 672 aa21.14■□□□□ 0.97
DDX28-201ENST00000332395 CARD10Q9BWT7 1032 aa21.14■□□□□ 0.97
DDX28-201ENST00000332395 MCM2P49736 904 aa21.13■□□□□ 0.97
DDX28-201ENST00000332395 AFDNP55196 1824 aaKnown RBP21.13■□□□□ 0.97
DDX28-201ENST00000332395 ERVV-2B6SEH9 535 aa21.13■□□□□ 0.97
DDX28-201ENST00000332395 IL2RBP14784 551 aa21.13■□□□□ 0.97
DDX28-201ENST00000332395 NUCB2P80303 420 aa21.13■□□□□ 0.97
DDX28-201ENST00000332395 CLEC17AQ6ZS10 378 aa21.13■□□□□ 0.97
DDX28-201ENST00000332395 GZF1Q9H116 711 aaPredicted RBP21.13■□□□□ 0.97
DDX28-201ENST00000332395 HSPA4P34932 840 aa21.12■□□□□ 0.97
DDX28-201ENST00000332395 EPHA10Q5JZY3 1008 aa21.12■□□□□ 0.97
DDX28-201ENST00000332395 ZGPATQ8N5A5 531 aaKnown RBP21.12■□□□□ 0.97
DDX28-201ENST00000332395 RAD50Q92878 1312 aa21.12■□□□□ 0.97
DDX28-201ENST00000332395 UBR2Q8IWV8 1755 aa21.12■□□□□ 0.97
DDX28-201ENST00000332395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.12■□□□□ 0.97
DDX28-201ENST00000332395 PTMSP20962 102 aa21.11■□□□□ 0.97
DDX28-201ENST00000332395 NKX1-1Q15270 411 aaPredicted RBP21.11■□□□□ 0.97
DDX28-201ENST00000332395 SIL1Q9H173 461 aa21.11■□□□□ 0.97
DDX28-201ENST00000332395 ERBB4Q15303 1308 aa21.11■□□□□ 0.97
DDX28-201ENST00000332395 SHANK3Q9BYB0 1731 aa21.11■□□□□ 0.97
DDX28-201ENST00000332395 CYP2E1P05181 493 aaPredicted RBP21.1■□□□□ 0.97
DDX28-201ENST00000332395 CWC27Q6UX04 472 aaKnown RBP21.1■□□□□ 0.97
DDX28-201ENST00000332395 PLBD2Q8NHP8 589 aa21.1■□□□□ 0.97
DDX28-201ENST00000332395 UBE2Q2Q8WVN8 375 aa21.1■□□□□ 0.97
DDX28-201ENST00000332395 EAF2Q96CJ1 260 aaPredicted RBP21.1■□□□□ 0.97
DDX28-201ENST00000332395 TMX3Q96JJ7 454 aa21.1■□□□□ 0.97
DDX28-201ENST00000332395 STRN4Q9NRL3 753 aa21.1■□□□□ 0.97
DDX28-201ENST00000332395 NHSL1Q5SYE7 1610 aa21.1■□□□□ 0.97
DDX28-201ENST00000332395 KLHDC4Q8TBB5 520 aa21.1■□□□□ 0.97
DDX28-201ENST00000332395 PAPPAQ13219 1627 aa21.09■□□□□ 0.97
DDX28-201ENST00000332395 LSG1Q9H089 658 aaKnown RBP21.09■□□□□ 0.97
DDX28-201ENST00000332395 DIAPH3Q9NSV4 1193 aa21.09■□□□□ 0.97
DDX28-201ENST00000332395 KCPQ6ZWJ8 1503 aa21.09■□□□□ 0.97
DDX28-201ENST00000332395 NBPF26B4DH59 902 aa21.09■□□□□ 0.97
DDX28-201ENST00000332395 NBPF14Q5TI25 921 aa21.09■□□□□ 0.97
DDX28-201ENST00000332395 NBPF10Q6P3W6 841 aaKnown RBP21.09■□□□□ 0.97
DDX28-201ENST00000332395 NBPF15Q8N660 670 aa21.09■□□□□ 0.97
DDX28-201ENST00000332395 COL15A1P39059 1388 aa21.09■□□□□ 0.97
DDX28-201ENST00000332395 ATP5J2-PTCD1G3V325 749 aa21.08■□□□□ 0.97
DDX28-201ENST00000332395 PTCD1O75127 700 aaKnown RBP21.08■□□□□ 0.97
DDX28-201ENST00000332395 BAG4O95429 457 aaKnown RBP21.08■□□□□ 0.97
DDX28-201ENST00000332395 PKP1Q13835 747 aa21.08■□□□□ 0.97
DDX28-201ENST00000332395 UBE3BQ7Z3V4 1068 aa21.08■□□□□ 0.97
DDX28-201ENST00000332395 DDX54Q8TDD1 881 aaKnown RBP21.08■□□□□ 0.97
DDX28-201ENST00000332395 JARID2Q92833 1246 aaPredicted RBP21.08■□□□□ 0.97
DDX28-201ENST00000332395 EVA1CP58658 441 aa21.07■□□□□ 0.96
DDX28-201ENST00000332395 KIAA1211Q6ZU35 1233 aa21.07■□□□□ 0.96
DDX28-201ENST00000332395 EVI5LQ96CN4 794 aa21.07■□□□□ 0.96
DDX28-201ENST00000332395 UPF3BQ9BZI7 483 aaKnown RBP21.07■□□□□ 0.96
DDX28-201ENST00000332395 CCDC8Q9H0W5 538 aaPredicted RBP21.07■□□□□ 0.96
DDX28-201ENST00000332395 GOLGA6L22H0YM25 854 aa21.07■□□□□ 0.96
DDX28-201ENST00000332395 SKOR2Q2VWA4 1001 aaPredicted RBP21.07■□□□□ 0.96
DDX28-201ENST00000332395 L1TD1Q5T7N2 865 aaKnown RBP21.07■□□□□ 0.96
DDX28-201ENST00000332395 RUFY2Q8WXA3 655 aa21.07■□□□□ 0.96
DDX28-201ENST00000332395 A0A087WZG4 1122 aa21.06■□□□□ 0.96
DDX28-201ENST00000332395 RABL6Q3YEC7 729 aaPredicted RBP21.06■□□□□ 0.96
DDX28-201ENST00000332395 COPRSQ9NQ92 184 aa21.06■□□□□ 0.96
DDX28-201ENST00000332395 TLR7Q9NYK1 1049 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms