RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PDE1CQ14123 709 aaPredicted RBP18.84■□□□□ 0.61
PTCH1-201ENST00000331920 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 CALML4Q96GE6 196 aa18.84■□□□□ 0.61
PTCH1-201ENST00000331920 IDEP14735 1019 aa18.83■□□□□ 0.61
PTCH1-201ENST00000331920 SLC12A7Q9Y666 1083 aa18.83■□□□□ 0.61
PTCH1-201ENST00000331920 FAM160A1Q05DH4 1040 aa18.83■□□□□ 0.61
PTCH1-201ENST00000331920 ATP2B3Q16720 1220 aa18.83■□□□□ 0.6
PTCH1-201ENST00000331920 WDR66Q8TBY9 1149 aa18.83■□□□□ 0.6
PTCH1-201ENST00000331920 CCT2P78371 535 aaKnown RBP18.83■□□□□ 0.6
PTCH1-201ENST00000331920 CDCA7LQ96GN5 454 aa18.83■□□□□ 0.6
PTCH1-201ENST00000331920 ZSCAN31Q96LW9 406 aaPredicted RBP18.83■□□□□ 0.6
PTCH1-201ENST00000331920 RSPH14Q9UHP6 348 aa18.83■□□□□ 0.6
PTCH1-201ENST00000331920 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
PTCH1-201ENST00000331920 U3KPZ7 1027 aaPredicted RBP18.82■□□□□ 0.6
PTCH1-201ENST00000331920 GMNNO75496 209 aa18.82■□□□□ 0.6
PTCH1-201ENST00000331920 CCDC183Q5T5S1 534 aa18.82■□□□□ 0.6
PTCH1-201ENST00000331920 FAM212AQ96EL1 285 aa18.82■□□□□ 0.6
PTCH1-201ENST00000331920 CHD1LQ86WJ1 897 aa18.82■□□□□ 0.6
PTCH1-201ENST00000331920 PROCA1Q8NCQ7 364 aaPredicted RBP18.82■□□□□ 0.6
PTCH1-201ENST00000331920 CTCFLQ8NI51 663 aaPredicted RBP18.82■□□□□ 0.6
PTCH1-201ENST00000331920 MIPOL1Q8TD10 442 aa18.82■□□□□ 0.6
PTCH1-201ENST00000331920 ATRIPQ8WXE1 791 aa18.82■□□□□ 0.6
PTCH1-201ENST00000331920 CCDC50Q8IVM0 306 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 SRCIN1Q9C0H9 1055 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 CCDC194A0A1B0GVG4 234 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 PHACTR2O75167 634 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 CFAP157Q5JU67 520 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 ZPR1O75312 459 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 CCDC12Q8WUD4 166 aaPredicted RBP18.81■□□□□ 0.6
PTCH1-201ENST00000331920 A0A087WZG4 1122 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 CRCPO75575 148 aa18.81■□□□□ 0.6
PTCH1-201ENST00000331920 EEF2P13639 858 aaKnown RBP18.81■□□□□ 0.6
PTCH1-201ENST00000331920 SNW1Q13573 536 aaKnown RBP18.81■□□□□ 0.6
PTCH1-201ENST00000331920 GBP7Q8N8V2 638 aaPredicted RBP18.8■□□□□ 0.6
PTCH1-201ENST00000331920 DHX57Q6P158 1386 aaKnown RBP18.8■□□□□ 0.6
PTCH1-201ENST00000331920 FAM114A1Q8IWE2 563 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 HAUS7Q99871 368 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 SOGA1O94964 1423 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 AAMPQ13685 434 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 SULT6B1Q6IMI4 303 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 TCP11L2Q8N4U5 519 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 GOLGA8AA7E2F4 631 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 GOLGA8BA8MQT2 603 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 RFC1P35251 1148 aaPredicted RBP18.8■□□□□ 0.6
PTCH1-201ENST00000331920 MICALL1Q8N3F8 863 aa18.8■□□□□ 0.6
PTCH1-201ENST00000331920 POTEB2H3BUK9 544 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 STX6O43752 255 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 KIF5AQ12840 1032 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 TXNDC16Q9P2K2 825 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 CCDC65Q8IXS2 484 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
PTCH1-201ENST00000331920 SARNPP82979 210 aaKnown RBP18.79■□□□□ 0.6
PTCH1-201ENST00000331920 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 SPG7Q9UQ90 795 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 BOLA2Q9H3K6 86 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 VPS8Q8N3P4 1428 aa18.79■□□□□ 0.6
PTCH1-201ENST00000331920 ERCC5P28715 1186 aaPredicted RBP18.78■□□□□ 0.6
PTCH1-201ENST00000331920 ARID4AP29374 1257 aaPredicted RBP18.78■□□□□ 0.6
PTCH1-201ENST00000331920 ARID5AQ03989 594 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 HSP90AA4PQ58FG1 418 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 ZNF530Q6P9A1 599 aaPredicted RBP18.78■□□□□ 0.6
PTCH1-201ENST00000331920 RB1CC1Q8TDY2 1594 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 MCM6Q14566 821 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 PRPF40BQ6NWY9 871 aaKnown RBP18.78■□□□□ 0.6
PTCH1-201ENST00000331920 PPFIA3O75145 1194 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 WHAMMQ8TF30 809 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 TTC21AQ8NDW8 1320 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 IQCA1Q86XH1 822 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 CCDC170Q8IYT3 715 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 AKNAD1Q5T1N1 836 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 CYB5RLQ6IPT4 315 aa18.78■□□□□ 0.6
PTCH1-201ENST00000331920 PHAXQ9H814 394 aaKnown RBP18.78■□□□□ 0.6
PTCH1-201ENST00000331920 DNAJC21Q5F1R6 531 aaKnown RBP18.77■□□□□ 0.6
PTCH1-201ENST00000331920 PTGS1P23219 599 aa18.77■□□□□ 0.6
PTCH1-201ENST00000331920 CCT6BQ92526 530 aa18.77■□□□□ 0.6
PTCH1-201ENST00000331920 CATIPQ7Z7H3 387 aa18.77■□□□□ 0.59
PTCH1-201ENST00000331920 CCDC25Q86WR0 208 aa18.77■□□□□ 0.59
PTCH1-201ENST00000331920 TCP11L1Q9NUJ3 509 aa18.77■□□□□ 0.59
PTCH1-201ENST00000331920 RASAL2Q9UJF2 1139 aa18.77■□□□□ 0.59
PTCH1-201ENST00000331920 AMPD3Q01432 767 aa18.77■□□□□ 0.59
PTCH1-201ENST00000331920 IFI16Q16666 785 aaKnown RBP18.77■□□□□ 0.59
PTCH1-201ENST00000331920 FSIP1Q8NA03 581 aa18.77■□□□□ 0.59
PTCH1-201ENST00000331920 USP25Q9UHP3 1055 aa18.77■□□□□ 0.59
PTCH1-201ENST00000331920 CCDC196A0A1B0GTZ2 297 aa18.76■□□□□ 0.59
PTCH1-201ENST00000331920 PSMD6Q15008 389 aa18.76■□□□□ 0.59
PTCH1-201ENST00000331920 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
PTCH1-201ENST00000331920 IRX5P78411 483 aaPredicted RBP18.76■□□□□ 0.59
PTCH1-201ENST00000331920 PLCB3Q01970 1234 aa18.76■□□□□ 0.59
PTCH1-201ENST00000331920 STXBP4Q6ZWJ1 553 aa18.76■□□□□ 0.59
PTCH1-201ENST00000331920 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
PTCH1-201ENST00000331920 TAF12Q16514 161 aa18.76■□□□□ 0.59
PTCH1-201ENST00000331920 RASA3Q14644 834 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 RSPH3Q86UC2 560 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 DDX12PQ92771 950 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 KCNK9Q9NPC2 374 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 IFIT3O14879 490 aaKnown RBP18.75■□□□□ 0.59
PTCH1-201ENST00000331920 SELENOOQ9BVL4 669 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 PRPF31Q8WWY3 499 aaKnown RBP18.75■□□□□ 0.59
PTCH1-201ENST00000331920 EXOC1Q9NV70 894 aa18.75■□□□□ 0.59
PTCH1-201ENST00000331920 GNG11P61952 73 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms