RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ALDH1L2Q3SY69 923 aa20.6■□□□□ 0.89
LRRC28-202ENST00000331450 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
LRRC28-202ENST00000331450 COPS6Q7L5N1 327 aa20.6■□□□□ 0.89
LRRC28-202ENST00000331450 NPM2Q86SE8 214 aaKnown RBP20.6■□□□□ 0.89
LRRC28-202ENST00000331450 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
LRRC28-202ENST00000331450 SSH1Q8WYL5 1049 aa20.59■□□□□ 0.89
LRRC28-202ENST00000331450 MTFR1LQ9H019 292 aa20.59■□□□□ 0.89
LRRC28-202ENST00000331450 ERVV-1B6SEH8 477 aa20.58■□□□□ 0.89
LRRC28-202ENST00000331450 ZPR1O75312 459 aa20.58■□□□□ 0.89
LRRC28-202ENST00000331450 G2E3Q7L622 706 aa20.58■□□□□ 0.89
LRRC28-202ENST00000331450 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
LRRC28-202ENST00000331450 ZBTB7AO95365 584 aa20.57■□□□□ 0.88
LRRC28-202ENST00000331450 RARSP54136 660 aaKnown RBP20.57■□□□□ 0.88
LRRC28-202ENST00000331450 KIF6Q6ZMV9 814 aa20.57■□□□□ 0.88
LRRC28-202ENST00000331450 MRPL50Q8N5N7 158 aaKnown RBP20.57■□□□□ 0.88
LRRC28-202ENST00000331450 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
LRRC28-202ENST00000331450 FLIIQ13045 1269 aa20.56■□□□□ 0.88
LRRC28-202ENST00000331450 FKBP8Q14318 412 aa20.56■□□□□ 0.88
LRRC28-202ENST00000331450 CLEC4GQ6UXB4 293 aa20.56■□□□□ 0.88
LRRC28-202ENST00000331450 ZBTB3Q9H5J0 574 aa20.56■□□□□ 0.88
LRRC28-202ENST00000331450 ADCY9O60503 1353 aa20.56■□□□□ 0.88
LRRC28-202ENST00000331450 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
LRRC28-202ENST00000331450 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
LRRC28-202ENST00000331450 HLFQ16534 295 aa20.55■□□□□ 0.88
LRRC28-202ENST00000331450 MSL1Q68DK7 614 aa20.55■□□□□ 0.88
LRRC28-202ENST00000331450 NLGN1Q8N2Q7 840 aa20.55■□□□□ 0.88
LRRC28-202ENST00000331450 PLBD2Q8NHP8 589 aa20.55■□□□□ 0.88
LRRC28-202ENST00000331450 SGIP1Q9BQI5 828 aa20.55■□□□□ 0.88
LRRC28-202ENST00000331450 GIGYF2Q6Y7W6 1299 aaKnown RBP20.54■□□□□ 0.88
LRRC28-202ENST00000331450 ARXQ96QS3 562 aa20.54■□□□□ 0.88
LRRC28-202ENST00000331450 BCL2L13Q9BXK5 485 aa20.54■□□□□ 0.88
LRRC28-202ENST00000331450 SMC4Q9NTJ3 1288 aa20.54■□□□□ 0.88
LRRC28-202ENST00000331450 PTGER2P43116 358 aa20.53■□□□□ 0.88
LRRC28-202ENST00000331450 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
LRRC28-202ENST00000331450 ZNF652Q9Y2D9 606 aa20.53■□□□□ 0.88
LRRC28-202ENST00000331450 TM4SF1P30408 202 aa20.52■□□□□ 0.88
LRRC28-202ENST00000331450 TBC1D9BQ66K14 1250 aa20.52■□□□□ 0.88
LRRC28-202ENST00000331450 ATF5Q9Y2D1 282 aaPredicted RBP20.52■□□□□ 0.88
LRRC28-202ENST00000331450 DDX58O95786 925 aaKnown RBP20.51■□□□□ 0.87
LRRC28-202ENST00000331450 NFIXQ14938 502 aa20.51■□□□□ 0.87
LRRC28-202ENST00000331450 SPON1Q9HCB6 807 aa20.51■□□□□ 0.87
LRRC28-202ENST00000331450 ANKRD31Q8N7Z5 1873 aa20.51■□□□□ 0.87
LRRC28-202ENST00000331450 LAMB2P55268 1798 aa20.51■□□□□ 0.87
LRRC28-202ENST00000331450 PXDNLA1KZ92 1463 aa20.5■□□□□ 0.87
LRRC28-202ENST00000331450 DDR1Q08345 913 aa20.5■□□□□ 0.87
LRRC28-202ENST00000331450 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
LRRC28-202ENST00000331450 KSR2Q6VAB6 950 aa20.5■□□□□ 0.87
LRRC28-202ENST00000331450 PTPRCP08575 1304 aa20.5■□□□□ 0.87
LRRC28-202ENST00000331450 KIF16BQ96L93 1317 aa20.5■□□□□ 0.87
LRRC28-202ENST00000331450 KIAA1551Q9HCM1 1747 aa20.5■□□□□ 0.87
LRRC28-202ENST00000331450 CARMIL3Q8ND23 1372 aa20.49■□□□□ 0.87
LRRC28-202ENST00000331450 PI4KAP2A4QPH2 592 aa20.49■□□□□ 0.87
LRRC28-202ENST00000331450 MMP10P09238 476 aa20.49■□□□□ 0.87
LRRC28-202ENST00000331450 ZNF34Q8IZ26 560 aa20.49■□□□□ 0.87
LRRC28-202ENST00000331450 PI4KAP1Q8N8J0 262 aa20.49■□□□□ 0.87
LRRC28-202ENST00000331450 UBN2Q6ZU65 1347 aa20.49■□□□□ 0.87
LRRC28-202ENST00000331450 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
LRRC28-202ENST00000331450 BCAR3O75815 825 aa20.48■□□□□ 0.87
LRRC28-202ENST00000331450 TCIRG1Q13488 830 aa20.48■□□□□ 0.87
LRRC28-202ENST00000331450 HSP90AB3PQ58FF7 597 aa20.48■□□□□ 0.87
LRRC28-202ENST00000331450 RIC3Q7Z5B4 369 aa20.48■□□□□ 0.87
LRRC28-202ENST00000331450 MAP3K2Q9Y2U5 619 aa20.48■□□□□ 0.87
LRRC28-202ENST00000331450 IBTKQ9P2D0 1353 aaPredicted RBP20.47■□□□□ 0.87
LRRC28-202ENST00000331450 DDX60Q8IY21 1712 aaKnown RBP20.47■□□□□ 0.87
LRRC28-202ENST00000331450 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
LRRC28-202ENST00000331450 METTL22Q9BUU2 404 aaPredicted RBP20.47■□□□□ 0.87
LRRC28-202ENST00000331450 TNRC6CQ9HCJ0 1690 aaKnown RBP20.46■□□□□ 0.87
LRRC28-202ENST00000331450 BICDL1Q6ZP65 573 aa20.46■□□□□ 0.87
LRRC28-202ENST00000331450 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
LRRC28-202ENST00000331450 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
LRRC28-202ENST00000331450 DLEC1Q9Y238 1755 aa20.46■□□□□ 0.87
LRRC28-202ENST00000331450 C10orf71Q711Q0 1435 aa20.45■□□□□ 0.86
LRRC28-202ENST00000331450 GPTP24298 496 aa20.45■□□□□ 0.86
LRRC28-202ENST00000331450 POLD1P28340 1107 aa20.45■□□□□ 0.86
LRRC28-202ENST00000331450 DNAAF4Q8WXU2 420 aa20.45■□□□□ 0.86
LRRC28-202ENST00000331450 SETDB2Q96T68 719 aa20.45■□□□□ 0.86
LRRC28-202ENST00000331450 NOB1Q9ULX3 412 aaKnown RBP20.45■□□□□ 0.86
LRRC28-202ENST00000331450 F6X3S4 739 aa20.44■□□□□ 0.86
LRRC28-202ENST00000331450 TRIM28Q13263 835 aaKnown RBP20.44■□□□□ 0.86
LRRC28-202ENST00000331450 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
LRRC28-202ENST00000331450 COL11A2P13942 1736 aaPredicted RBP20.44■□□□□ 0.86
LRRC28-202ENST00000331450 SERPINB2P05120 415 aa20.43■□□□□ 0.86
LRRC28-202ENST00000331450 IGKV5-2P06315 115 aa20.43■□□□□ 0.86
LRRC28-202ENST00000331450 PARP10Q53GL7 1025 aa20.43■□□□□ 0.86
LRRC28-202ENST00000331450 NLRP10Q86W26 655 aa20.43■□□□□ 0.86
LRRC28-202ENST00000331450 MYD88Q99836 296 aa20.43■□□□□ 0.86
LRRC28-202ENST00000331450 PARP3Q9Y6F1 533 aa20.43■□□□□ 0.86
LRRC28-202ENST00000331450 ATP5J2-PTCD1G3V325 749 aa20.42■□□□□ 0.86
LRRC28-202ENST00000331450 RIC1Q4ADV7 1423 aa20.42■□□□□ 0.86
LRRC28-202ENST00000331450 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
LRRC28-202ENST00000331450 MYH3P11055 1940 aa20.41■□□□□ 0.86
LRRC28-202ENST00000331450 NTSR2O95665 410 aa20.41■□□□□ 0.86
LRRC28-202ENST00000331450 BEND3Q5T5X7 828 aa20.41■□□□□ 0.86
LRRC28-202ENST00000331450 SUSD4Q5VX71 490 aa20.41■□□□□ 0.86
LRRC28-202ENST00000331450 NEURL1BA8MQ27 555 aa20.4■□□□□ 0.86
LRRC28-202ENST00000331450 ABCC4O15439 1325 aa20.4■□□□□ 0.86
LRRC28-202ENST00000331450 NEXNQ0ZGT2 675 aa20.4■□□□□ 0.86
LRRC28-202ENST00000331450 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
LRRC28-202ENST00000331450 PRR5LQ6MZQ0 368 aa20.4■□□□□ 0.86
LRRC28-202ENST00000331450 LINS1Q8NG48 757 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms