RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 PXDNLA1KZ92 1463 aa20.91■□□□□ 0.94
PTP4A3-201ENST00000329397 BTBD11A6QL63 1104 aa20.91■□□□□ 0.94
PTP4A3-201ENST00000329397 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
PTP4A3-201ENST00000329397 TEFQ10587 303 aa20.91■□□□□ 0.94
PTP4A3-201ENST00000329397 DIAPH3Q9NSV4 1193 aa20.91■□□□□ 0.94
PTP4A3-201ENST00000329397 FAM13BQ9NYF5 915 aa20.91■□□□□ 0.94
PTP4A3-201ENST00000329397 STX6O43752 255 aa20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 ZNF530Q6P9A1 599 aaPredicted RBP20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 SYAP1Q96A49 352 aaPredicted RBP20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 JAKMIP1Q96N16 626 aaKnown RBP20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 ZSCAN22P10073 491 aaPredicted RBP20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 PLCB2Q00722 1185 aa20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 NECAB1Q8N987 351 aa20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 TCEANC2Q96MN5 208 aa20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 CCDC39Q9UFE4 941 aa20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 SMC3Q9UQE7 1217 aa20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 MAP3K2Q9Y2U5 619 aa20.9■□□□□ 0.94
PTP4A3-201ENST00000329397 C17orf53Q8N3J3 647 aaPredicted RBP20.89■□□□□ 0.93
PTP4A3-201ENST00000329397 C9orf78Q9NZ63 289 aaPredicted RBP20.89■□□□□ 0.93
PTP4A3-201ENST00000329397 LIMCH1Q9UPQ0 1083 aa20.89■□□□□ 0.93
PTP4A3-201ENST00000329397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.89■□□□□ 0.93
PTP4A3-201ENST00000329397 RGPD2P0DJD1 1756 aa20.89■□□□□ 0.93
PTP4A3-201ENST00000329397 CEMIPQ8WUJ3 1361 aa20.88■□□□□ 0.93
PTP4A3-201ENST00000329397 LTN1O94822 1766 aa20.88■□□□□ 0.93
PTP4A3-201ENST00000329397 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
PTP4A3-201ENST00000329397 UQCRHLA0A096LP55 91 aa20.88■□□□□ 0.93
PTP4A3-201ENST00000329397 UQCRHP07919 91 aa20.88■□□□□ 0.93
PTP4A3-201ENST00000329397 AIMP1Q12904 312 aaKnown RBP20.88■□□□□ 0.93
PTP4A3-201ENST00000329397 IL17RAQ96F46 866 aa20.88■□□□□ 0.93
PTP4A3-201ENST00000329397 DNM1Q05193 864 aaKnown RBP20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 CHMP3Q9Y3E7 222 aa20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 GJB2P29033 226 aa20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 GIMAP6Q6P9H5 292 aa20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 JARID2Q92833 1246 aaPredicted RBP20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 FAM227BQ96M60 508 aa20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 SIL1Q9H173 461 aa20.87■□□□□ 0.93
PTP4A3-201ENST00000329397 VPS37CA5D8V6 355 aaPredicted RBP20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 F13A1P00488 732 aa20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 HYPKQ9NX55 129 aa20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 PHF8Q9UPP1 1060 aa20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 FAM173BQ6P4H8 233 aa20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 LMOD2Q6P5Q4 547 aa20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 AACSQ86V21 672 aa20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 KLHDC4Q8TBB5 520 aa20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 CCDC8Q9H0W5 538 aaPredicted RBP20.86■□□□□ 0.93
PTP4A3-201ENST00000329397 GLRX3O76003 335 aaKnown RBP20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 ST3GAL1Q11201 340 aa20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 IP6K1Q92551 441 aa20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 TTC12Q9H892 705 aaPredicted RBP20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 TLR7Q9NYK1 1049 aaKnown RBP20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 IFIT2P09913 472 aaKnown RBP20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 PDRG1Q9NUG6 133 aa20.85■□□□□ 0.93
PTP4A3-201ENST00000329397 CCDC183Q5T5S1 534 aa20.84■□□□□ 0.93
PTP4A3-201ENST00000329397 BABAM1Q9NWV8 329 aa20.84■□□□□ 0.93
PTP4A3-201ENST00000329397 TAF6LQ9Y6J9 622 aa20.84■□□□□ 0.93
PTP4A3-201ENST00000329397 PHF14O94880 888 aa20.84■□□□□ 0.93
PTP4A3-201ENST00000329397 ECHDC1Q9NTX5 307 aa20.84■□□□□ 0.93
PTP4A3-201ENST00000329397 KCNJ4P48050 445 aa20.83■□□□□ 0.93
PTP4A3-201ENST00000329397 ME3Q16798 604 aa20.83■□□□□ 0.93
PTP4A3-201ENST00000329397 ESCO1Q5FWF5 840 aa20.83■□□□□ 0.93
PTP4A3-201ENST00000329397 THEMISQ8N1K5 641 aaPredicted RBP20.83■□□□□ 0.93
PTP4A3-201ENST00000329397 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.83■□□□□ 0.93
PTP4A3-201ENST00000329397 PXDNQ92626 1479 aa20.83■□□□□ 0.93
PTP4A3-201ENST00000329397 ADCY5O95622 1261 aa20.82■□□□□ 0.92
PTP4A3-201ENST00000329397 PSME1Q06323 249 aa20.82■□□□□ 0.92
PTP4A3-201ENST00000329397 MTMR6Q9Y217 621 aa20.82■□□□□ 0.92
PTP4A3-201ENST00000329397 ARHGAP23Q9P227 1491 aa20.82■□□□□ 0.92
PTP4A3-201ENST00000329397 SUCLG2Q96I99 432 aa20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 UBE2HP62256 183 aa20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 DNTTIP2Q5QJE6 756 aaKnown RBP20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 EAF2Q96CJ1 260 aaPredicted RBP20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 EDC3Q96F86 508 aaKnown RBP20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 BOLA2Q9H3K6 86 aa20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 RBM8AQ9Y5S9 174 aaKnown RBP20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 SLIT1O75093 1534 aa20.81■□□□□ 0.92
PTP4A3-201ENST00000329397 NMIQ13287 307 aaPredicted RBP20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 HSP90AB4PQ58FF6 505 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 TSC1Q92574 1164 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 BICC1Q9H694 974 aaKnown RBP20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 TTC41PQ6P2S7 1318 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 TMEM87AQ8NBN3 555 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 KAZALD1Q96I82 304 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 CYP46A1Q9Y6A2 500 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 SASH1O94885 1247 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 PIP4K2AP48426 406 aaPredicted RBP20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 TPCN1Q9ULQ1 816 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 NAP1L2Q9ULW6 460 aaPredicted RBP20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 NDUFB9Q9Y6M9 179 aa20.8■□□□□ 0.92
PTP4A3-201ENST00000329397 GIGYF1O75420 1035 aaPredicted RBP20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 ANKARQ7Z5J8 1434 aa20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 CCDC171Q6TFL3 1326 aa20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 A0A0D9SFI3 127 aa20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 RNMTO43148 476 aaKnown RBP20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 CHGBP05060 677 aa20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 KIAA2012Q0VF49 1180 aa20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 AKAP4Q5JQC9 854 aa20.79■□□□□ 0.92
PTP4A3-201ENST00000329397 CHMP4AQ9BY43 222 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms