RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ERVV-1B6SEH8 477 aa35.99■■■■□ 3.35
ATPAF1-201ENST00000329231 BRIP1Q9BX63 1249 aa35.98■■■■□ 3.35
ATPAF1-201ENST00000329231 BRCA1P38398 1863 aaKnown RBP35.98■■■■□ 3.35
ATPAF1-201ENST00000329231 HLFQ16534 295 aa35.97■■■■□ 3.35
ATPAF1-201ENST00000329231 PDZRN3Q9UPQ7 1066 aa35.97■■■■□ 3.35
ATPAF1-201ENST00000329231 NIP7Q9Y221 180 aaKnown RBP eCLIP35.97■■■■□ 3.35
ATPAF1-201ENST00000329231 MAP3K15Q6ZN16 1313 aa35.97■■■■□ 3.35
ATPAF1-201ENST00000329231 H0YIN7 160 aa35.96■■■■□ 3.35
ATPAF1-201ENST00000329231 PDE6BP35913 854 aa35.96■■■■□ 3.35
ATPAF1-201ENST00000329231 ST5P78524 1137 aa35.96■■■■□ 3.35
ATPAF1-201ENST00000329231 TTLL7Q6ZT98 887 aa35.96■■■■□ 3.35
ATPAF1-201ENST00000329231 NBPF5PQ86XG9 351 aaPredicted RBP35.96■■■■□ 3.35
ATPAF1-201ENST00000329231 C2CD5Q86YS7 1000 aa35.96■■■■□ 3.35
ATPAF1-201ENST00000329231 IFT57Q9NWB7 429 aa35.96■■■■□ 3.35
ATPAF1-201ENST00000329231 ZNF853P0CG23 659 aa35.95■■■■□ 3.35
ATPAF1-201ENST00000329231 GNAI1P63096 354 aa35.95■■■■□ 3.35
ATPAF1-201ENST00000329231 PDIA6Q15084 440 aa35.95■■■■□ 3.35
ATPAF1-201ENST00000329231 KRT24Q2M2I5 525 aa35.95■■■■□ 3.35
ATPAF1-201ENST00000329231 MBIPQ9NS73 344 aa35.95■■■■□ 3.35
ATPAF1-201ENST00000329231 HOXB7P09629 217 aa35.94■■■■□ 3.34
ATPAF1-201ENST00000329231 ARHGAP27Q6ZUM4 889 aa35.93■■■■□ 3.34
ATPAF1-201ENST00000329231 CCDC24Q8N4L8 307 aa35.93■■■■□ 3.34
ATPAF1-201ENST00000329231 NECTIN2Q92692 538 aa35.92■■■■□ 3.34
ATPAF1-201ENST00000329231 TPTE2Q6XPS3 522 aa35.91■■■■□ 3.34
ATPAF1-201ENST00000329231 LRP10Q7Z4F1 713 aa35.91■■■■□ 3.34
ATPAF1-201ENST00000329231 CCDC27Q2M243 656 aa35.9■■■■□ 3.34
ATPAF1-201ENST00000329231 ZBTB3Q9H5J0 574 aa35.9■■■■□ 3.34
ATPAF1-201ENST00000329231 PROSER3Q2NL68 480 aa35.89■■■■□ 3.34
ATPAF1-201ENST00000329231 TTLL6Q8N841 843 aa35.89■■■■□ 3.34
ATPAF1-201ENST00000329231 ANXA1P04083 346 aa35.88■■■■□ 3.33
ATPAF1-201ENST00000329231 HDGFL1Q5TGJ6 251 aa35.88■■■■□ 3.33
ATPAF1-201ENST00000329231 DDX21Q9NR30 783 aaKnown RBP eCLIP35.88■■■■□ 3.33
ATPAF1-201ENST00000329231 ARFGEF1Q9Y6D6 1849 aa35.87■■■■□ 3.33
ATPAF1-201ENST00000329231 NCBP3Q53F19 620 aaKnown RBP35.87■■■■□ 3.33
ATPAF1-201ENST00000329231 DUSP27Q5VZP5 1158 aa35.87■■■■□ 3.33
ATPAF1-201ENST00000329231 ATP10DQ9P241 1426 aa35.87■■■■□ 3.33
ATPAF1-201ENST00000329231 ANKRD31Q8N7Z5 1873 aa35.86■■■■□ 3.33
ATPAF1-201ENST00000329231 FAM177BA6PVY3 158 aa35.85■■■■□ 3.33
ATPAF1-201ENST00000329231 GIGYF2Q6Y7W6 1299 aaKnown RBP35.85■■■■□ 3.33
ATPAF1-201ENST00000329231 ZNF622Q969S3 477 aaKnown RBP eCLIP35.85■■■■□ 3.33
ATPAF1-201ENST00000329231 DLEC1Q9Y238 1755 aa35.84■■■■□ 3.33
ATPAF1-201ENST00000329231 WWC1Q8IX03 1113 aa35.84■■■■□ 3.33
ATPAF1-201ENST00000329231 NYXQ9GZU5 481 aa35.84■■■■□ 3.33
ATPAF1-201ENST00000329231 GTF2E1P29083 439 aaPredicted RBP35.83■■■■□ 3.33
ATPAF1-201ENST00000329231 COPS6Q7L5N1 327 aa35.83■■■■□ 3.33
ATPAF1-201ENST00000329231 CHPF2Q9P2E5 772 aa35.83■■■■□ 3.33
ATPAF1-201ENST00000329231 SENP3-EIF4A1A0A087X0R7 540 aa35.82■■■■□ 3.32
ATPAF1-201ENST00000329231 XAGE3Q8WTP9 111 aa35.82■■■■□ 3.32
ATPAF1-201ENST00000329231 DBF4Q9UBU7 674 aaPredicted RBP35.82■■■■□ 3.32
ATPAF1-201ENST00000329231 NUP98P52948 1817 aa35.82■■■■□ 3.32
ATPAF1-201ENST00000329231 ADCY9O60503 1353 aa35.81■■■■□ 3.32
ATPAF1-201ENST00000329231 AIMP1Q12904 312 aaKnown RBP35.81■■■■□ 3.32
ATPAF1-201ENST00000329231 GPTP24298 496 aa35.8■■■■□ 3.32
ATPAF1-201ENST00000329231 ZNF34Q8IZ26 560 aa35.8■■■■□ 3.32
ATPAF1-201ENST00000329231 SRGNP10124 158 aa35.79■■■■□ 3.32
ATPAF1-201ENST00000329231 STYK1Q6J9G0 422 aa35.79■■■■□ 3.32
ATPAF1-201ENST00000329231 FAM9BQ8IZU0 186 aa35.79■■■■□ 3.32
ATPAF1-201ENST00000329231 CNKSR1Q969H4 720 aa35.78■■■■□ 3.32
ATPAF1-201ENST00000329231 MASTLQ96GX5 879 aa35.78■■■■□ 3.32
ATPAF1-201ENST00000329231 UBN2Q6ZU65 1347 aa35.78■■■■□ 3.32
ATPAF1-201ENST00000329231 IBTKQ9P2D0 1353 aaPredicted RBP35.77■■■■□ 3.32
ATPAF1-201ENST00000329231 KLRG2A4D1S0 409 aaPredicted RBP35.76■■■■□ 3.32
ATPAF1-201ENST00000329231 PARP10Q53GL7 1025 aa35.76■■■■□ 3.32
ATPAF1-201ENST00000329231 HSP90AB3PQ58FF7 597 aa35.76■■■■□ 3.32
ATPAF1-201ENST00000329231 CHMP4AQ9BY43 222 aa35.76■■■■□ 3.32
ATPAF1-201ENST00000329231 HYPKQ9NX55 129 aa35.76■■■■□ 3.32
ATPAF1-201ENST00000329231 COL11A2P13942 1736 aaPredicted RBP35.75■■■■□ 3.31
ATPAF1-201ENST00000329231 ELL2O00472 640 aaPredicted RBP35.75■■■■□ 3.31
ATPAF1-201ENST00000329231 IL16Q14005 1332 aa35.75■■■■□ 3.31
ATPAF1-201ENST00000329231 SUSD4Q5VX71 490 aa35.74■■■■□ 3.31
ATPAF1-201ENST00000329231 PPP1R42Q7Z4L9 355 aa35.74■■■■□ 3.31
ATPAF1-201ENST00000329231 C8orf58Q8NAV2 365 aa35.74■■■■□ 3.31
ATPAF1-201ENST00000329231 NPR1P16066 1061 aa35.73■■■■□ 3.31
ATPAF1-201ENST00000329231 NUTM1Q86Y26 1132 aa35.73■■■■□ 3.31
ATPAF1-201ENST00000329231 C9orf131Q5VYM1 1079 aa35.72■■■■□ 3.31
ATPAF1-201ENST00000329231 ERFEQ4G0M1 354 aa35.71■■■■□ 3.31
ATPAF1-201ENST00000329231 TSR2Q969E8 191 aaKnown RBP35.71■■■■□ 3.31
ATPAF1-201ENST00000329231 SALL2Q9Y467 1007 aaPredicted RBP35.71■■■■□ 3.31
ATPAF1-201ENST00000329231 PLBD2Q8NHP8 589 aa35.7■■■■□ 3.31
ATPAF1-201ENST00000329231 ABCC12Q96J65 1359 aa35.69■■■■□ 3.3
ATPAF1-201ENST00000329231 NTSR2O95665 410 aa35.69■■■■□ 3.3
ATPAF1-201ENST00000329231 TCIRG1Q13488 830 aa35.69■■■■□ 3.3
ATPAF1-201ENST00000329231 PRPF40BQ6NWY9 871 aaKnown RBP35.69■■■■□ 3.3
ATPAF1-201ENST00000329231 ANKRD13DQ6ZTN6 518 aa35.69■■■■□ 3.3
ATPAF1-201ENST00000329231 WDR63Q8IWG1 891 aa35.69■■■■□ 3.3
ATPAF1-201ENST00000329231 GPBP1L1Q9HC44 474 aaPredicted RBP35.69■■■■□ 3.3
ATPAF1-201ENST00000329231 C21orf2O43822 256 aa35.68■■■■□ 3.3
ATPAF1-201ENST00000329231 UTP14AQ9BVJ6 771 aaKnown RBP35.68■■■■□ 3.3
ATPAF1-201ENST00000329231 CCDC30Q5VVM6 783 aa35.67■■■■□ 3.3
ATPAF1-201ENST00000329231 ZNF526Q8TF50 670 aaPredicted RBP35.67■■■■□ 3.3
ATPAF1-201ENST00000329231 RNF181Q9P0P0 153 aa35.67■■■■□ 3.3
ATPAF1-201ENST00000329231 ZNF219Q9P2Y4 722 aaPredicted RBP35.67■■■■□ 3.3
ATPAF1-201ENST00000329231 RASSF7Q02833 373 aa35.66■■■■□ 3.3
ATPAF1-201ENST00000329231 TSPYL6Q8N831 410 aa35.66■■■■□ 3.3
ATPAF1-201ENST00000329231 RIC1Q4ADV7 1423 aa35.66■■■■□ 3.3
ATPAF1-201ENST00000329231 SOGA3Q5TF21 947 aa35.65■■■■□ 3.3
ATPAF1-201ENST00000329231 RNF123Q5XPI4 1314 aa35.64■■■■□ 3.3
ATPAF1-201ENST00000329231 ALDH1B1P30837 517 aa35.64■■■■□ 3.3
ATPAF1-201ENST00000329231 CRY2Q49AN0 593 aa35.64■■■■□ 3.3
ATPAF1-201ENST00000329231 NLRP10Q86W26 655 aa35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms