RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 DIAPH3Q9NSV4 1193 aa11.78□□□□□ -0.52
SP1-201ENST00000327443 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
SP1-201ENST00000327443 MYO1CO00159 1063 aa11.77□□□□□ -0.53
SP1-201ENST00000327443 CTIFO43310 598 aaKnown RBP11.77□□□□□ -0.53
SP1-201ENST00000327443 LRCH2Q5VUJ6 765 aa11.77□□□□□ -0.53
SP1-201ENST00000327443 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
SP1-201ENST00000327443 GOLGA6L22H0YM25 854 aa11.77□□□□□ -0.53
SP1-201ENST00000327443 HOXC9P31274 260 aa11.77□□□□□ -0.53
SP1-201ENST00000327443 CHAF1AQ13111 956 aaPredicted RBP11.77□□□□□ -0.53
SP1-201ENST00000327443 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
SP1-201ENST00000327443 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
SP1-201ENST00000327443 KIF1CO43896 1103 aaKnown RBP11.76□□□□□ -0.53
SP1-201ENST00000327443 DDIT3P35638 169 aa11.76□□□□□ -0.53
SP1-201ENST00000327443 RNF214Q8ND24 703 aa11.76□□□□□ -0.53
SP1-201ENST00000327443 LCMT1Q9UIC8 334 aa11.76□□□□□ -0.53
SP1-201ENST00000327443 SPATA31A3Q5VYP0 1347 aa11.76□□□□□ -0.53
SP1-201ENST00000327443 SETQ01105 290 aaPredicted RBP11.76□□□□□ -0.53
SP1-201ENST00000327443 PPP2R5AQ15172 486 aa11.76□□□□□ -0.53
SP1-201ENST00000327443 NBPF10Q6P3W6 841 aaKnown RBP11.76□□□□□ -0.53
SP1-201ENST00000327443 MED4Q9NPJ6 270 aa11.76□□□□□ -0.53
SP1-201ENST00000327443 SSR1P43307 286 aaKnown RBP11.75□□□□□ -0.53
SP1-201ENST00000327443 TSGA10IPQ3SY00 556 aa11.75□□□□□ -0.53
SP1-201ENST00000327443 ARHGEF25Q86VW2 580 aa11.75□□□□□ -0.53
SP1-201ENST00000327443 ORAI2Q96SN7 254 aa11.75□□□□□ -0.53
SP1-201ENST00000327443 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
SP1-201ENST00000327443 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
SP1-201ENST00000327443 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
SP1-201ENST00000327443 IGHDP01880 384 aa11.75□□□□□ -0.53
SP1-201ENST00000327443 TTC12Q9H892 705 aaPredicted RBP11.75□□□□□ -0.53
SP1-201ENST00000327443 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
SP1-201ENST00000327443 NAA30Q147X3 362 aaPredicted RBP11.74□□□□□ -0.53
SP1-201ENST00000327443 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
SP1-201ENST00000327443 SOS1Q07889 1333 aaPredicted RBP11.74□□□□□ -0.53
SP1-201ENST00000327443 PKD1L3Q7Z443 1732 aa11.74□□□□□ -0.53
SP1-201ENST00000327443 PARP4Q9UKK3 1724 aaKnown RBP11.74□□□□□ -0.53
SP1-201ENST00000327443 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
SP1-201ENST00000327443 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
SP1-201ENST00000327443 NUTM2FA1L443 756 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
SP1-201ENST00000327443 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 MNS1Q8NEH6 495 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 BRINP3Q76B58 766 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 NBPF5PQ86XG9 351 aaPredicted RBP11.73□□□□□ -0.53
SP1-201ENST00000327443 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.73□□□□□ -0.53
SP1-201ENST00000327443 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 C22orf23Q9BZE7 217 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 DEF6Q9H4E7 631 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 IFT57Q9NWB7 429 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 HMGB1P09429 215 aaKnown RBP11.73□□□□□ -0.53
SP1-201ENST00000327443 SSFA2P28290 1259 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 OTUD6BQ8N6M0 293 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 NEK11Q8NG66 645 aa11.73□□□□□ -0.53
SP1-201ENST00000327443 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
SP1-201ENST00000327443 AMPHP49418 695 aa11.72□□□□□ -0.53
SP1-201ENST00000327443 CCDC91Q7Z6B0 441 aa11.72□□□□□ -0.53
SP1-201ENST00000327443 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
SP1-201ENST00000327443 REC8O95072 547 aa11.72□□□□□ -0.53
SP1-201ENST00000327443 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
SP1-201ENST00000327443 RBM28Q9NW13 759 aaKnown RBP11.72□□□□□ -0.53
SP1-201ENST00000327443 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
SP1-201ENST00000327443 ROBO1Q9Y6N7 1651 aa11.72□□□□□ -0.53
SP1-201ENST00000327443 PPP1R12AO14974 1030 aaPredicted RBP11.71□□□□□ -0.53
SP1-201ENST00000327443 GCP02774 474 aa11.71□□□□□ -0.53
SP1-201ENST00000327443 SPTLC3Q9NUV7 552 aa11.71□□□□□ -0.53
SP1-201ENST00000327443 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
SP1-201ENST00000327443 PLCH1Q4KWH8 1693 aa11.71□□□□□ -0.53
SP1-201ENST00000327443 KRBA2Q6ZNG9 492 aa11.71□□□□□ -0.54
SP1-201ENST00000327443 CREBRFQ8IUR6 639 aa11.71□□□□□ -0.54
SP1-201ENST00000327443 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.71□□□□□ -0.54
SP1-201ENST00000327443 COL14A1Q05707 1796 aaKnown RBP11.71□□□□□ -0.54
SP1-201ENST00000327443 KIAA0232Q92628 1395 aa11.71□□□□□ -0.54
SP1-201ENST00000327443 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
SP1-201ENST00000327443 RPAINQ86UA6 219 aa11.7□□□□□ -0.54
SP1-201ENST00000327443 GOLGA6L1Q8N7Z2 621 aa11.7□□□□□ -0.54
SP1-201ENST00000327443 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
SP1-201ENST00000327443 FOXO3O43524 673 aa11.7□□□□□ -0.54
SP1-201ENST00000327443 GNAI1P63096 354 aa11.7□□□□□ -0.54
SP1-201ENST00000327443 BAG4O95429 457 aaKnown RBP11.69□□□□□ -0.54
SP1-201ENST00000327443 TMEM132AQ24JP5 1023 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 RGPD5Q99666 1765 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 A0A1B0GUL7 405 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 BCAR3O75815 825 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 GSCP56915 257 aaPredicted RBP11.69□□□□□ -0.54
SP1-201ENST00000327443 ZKSCAN8Q15776 578 aaPredicted RBP11.69□□□□□ -0.54
SP1-201ENST00000327443 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 PIK3R5Q8WYR1 880 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 RGPD2P0DJD1 1756 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 KDM3BQ7LBC6 1761 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 CRB1P82279 1406 aa11.69□□□□□ -0.54
SP1-201ENST00000327443 ATP6V1AP38606 617 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 PDE3AQ14432 1141 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 ALDH1L2Q3SY69 923 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 TTC31Q49AM3 519 aaPredicted RBP11.68□□□□□ -0.54
SP1-201ENST00000327443 MCTP1Q6DN14 999 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 CCDC191Q8NCU4 936 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 ATG3Q9NT62 314 aa11.68□□□□□ -0.54
SP1-201ENST00000327443 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
SP1-201ENST00000327443 MRVI1Q9Y6F6 885 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms