RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 GAS2L3Q86XJ1 694 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 LRRC2Q9BYS8 371 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 BAG4O95429 457 aaKnown RBP12.92□□□□□ -0.34
CUL4A-201ENST00000326335 PHKG2P15735 406 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 ADGRL3Q9HAR2 1447 aa12.92□□□□□ -0.34
CUL4A-201ENST00000326335 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 DDX46Q7L014 1031 aaKnown RBP12.91□□□□□ -0.34
CUL4A-201ENST00000326335 CNTROBQ8N137 903 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 EAF2Q96CJ1 260 aaPredicted RBP12.91□□□□□ -0.34
CUL4A-201ENST00000326335 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 SRCAPQ6ZRS2 3230 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 PTH1RQ03431 593 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 FERMT3Q86UX7 667 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
CUL4A-201ENST00000326335 SLIT1O75093 1534 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 IBTKQ9P2D0 1353 aaPredicted RBP12.91□□□□□ -0.34
CUL4A-201ENST00000326335 IGKV5-2P06315 115 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 SSH3Q8TE77 659 aa12.91□□□□□ -0.34
CUL4A-201ENST00000326335 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 FGD1P98174 961 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 SYNE4Q8N205 404 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 VPS37CA5D8V6 355 aaPredicted RBP12.9□□□□□ -0.34
CUL4A-201ENST00000326335 TIMM10P62072 90 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 SEC62Q99442 399 aaKnown RBP12.9□□□□□ -0.34
CUL4A-201ENST00000326335 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 CCDC83Q8IWF9 413 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 SNX21Q969T3 373 aa12.9□□□□□ -0.34
CUL4A-201ENST00000326335 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
CUL4A-201ENST00000326335 PIP4K2BP78356 416 aa12.89□□□□□ -0.35
CUL4A-201ENST00000326335 ADCK5Q3MIX3 580 aa12.89□□□□□ -0.35
CUL4A-201ENST00000326335 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
CUL4A-201ENST00000326335 KCNQ4P56696 695 aa12.89□□□□□ -0.35
CUL4A-201ENST00000326335 TFCP2Q12800 502 aa12.89□□□□□ -0.35
CUL4A-201ENST00000326335 HYPKQ9NX55 129 aa12.89□□□□□ -0.35
CUL4A-201ENST00000326335 NSFL1CQ9UNZ2 370 aaKnown RBP12.89□□□□□ -0.35
CUL4A-201ENST00000326335 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 RGPD2P0DJD1 1756 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 FIBPO43427 364 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 SASH1O94885 1247 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 BRINP3Q76B58 766 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
CUL4A-201ENST00000326335 LINS1Q8NG48 757 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 PI4K2BQ8TCG2 481 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 SNRPA1P09661 255 aaKnown RBP12.87□□□□□ -0.35
CUL4A-201ENST00000326335 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 SMIM5Q71RC9 77 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
CUL4A-201ENST00000326335 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
CUL4A-201ENST00000326335 GORABQ5T7V8 394 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 ZCRB1Q8TBF4 217 aaKnown RBP12.87□□□□□ -0.35
CUL4A-201ENST00000326335 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 GPATCH3Q96I76 525 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 SLAIN2Q9P270 581 aa12.87□□□□□ -0.35
CUL4A-201ENST00000326335 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 DBNDD2Q9BQY9 259 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 SYCE3A1L190 88 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 GCKRQ14397 625 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 GRPEL1Q9HAV7 217 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 LARGE1O95461 756 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 AK2P54819 239 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 PDIA6Q15084 440 aa12.86□□□□□ -0.35
CUL4A-201ENST00000326335 TRIM44Q96DX7 344 aaPredicted RBP12.86□□□□□ -0.35
CUL4A-201ENST00000326335 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
CUL4A-201ENST00000326335 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
CUL4A-201ENST00000326335 GLRX3O76003 335 aaKnown RBP12.85□□□□□ -0.35
CUL4A-201ENST00000326335 HSP90B1P14625 803 aaKnown RBP12.85□□□□□ -0.35
CUL4A-201ENST00000326335 CEBPZQ03701 1054 aaKnown RBP12.85□□□□□ -0.35
CUL4A-201ENST00000326335 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
CUL4A-201ENST00000326335 L1TD1Q5T7N2 865 aaKnown RBP12.85□□□□□ -0.35
CUL4A-201ENST00000326335 DDX11Q96FC9 970 aa12.85□□□□□ -0.35
CUL4A-201ENST00000326335 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
CUL4A-201ENST00000326335 GOLIM4O00461 696 aa12.84□□□□□ -0.35
CUL4A-201ENST00000326335 SNX14Q9Y5W7 946 aa12.84□□□□□ -0.35
CUL4A-201ENST00000326335 PUS3Q9BZE2 481 aaKnown RBP12.84□□□□□ -0.35
CUL4A-201ENST00000326335 SNAP23O00161 211 aa12.84□□□□□ -0.35
CUL4A-201ENST00000326335 HELBQ8NG08 1087 aaPredicted RBP12.84□□□□□ -0.35
CUL4A-201ENST00000326335 CHMP4CQ96CF2 233 aa12.84□□□□□ -0.35
CUL4A-201ENST00000326335 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
CUL4A-201ENST00000326335 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 LRRC24Q50LG9 513 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 ZNF589Q86UQ0 364 aaPredicted RBP12.83□□□□□ -0.36
CUL4A-201ENST00000326335 MEGF6O75095 1541 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 SGSM2O43147 1006 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 HSP90AB4PQ58FF6 505 aa12.83□□□□□ -0.36
CUL4A-201ENST00000326335 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms