RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
CCNC-201ENST00000326298 RRAGCQ9HB90 399 aa10.78□□□□□ -0.68
CCNC-201ENST00000326298 CCDC88AQ3V6T2 1871 aa10.77□□□□□ -0.68
CCNC-201ENST00000326298 CNBD1Q8NA66 436 aa10.77□□□□□ -0.68
CCNC-201ENST00000326298 ANXA1P04083 346 aa10.77□□□□□ -0.69
CCNC-201ENST00000326298 SRGNP10124 158 aa10.77□□□□□ -0.69
CCNC-201ENST00000326298 CACNA1SQ13698 1873 aa10.77□□□□□ -0.69
CCNC-201ENST00000326298 TOMM70O94826 608 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 MYL6BP14649 208 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 KRT24Q2M2I5 525 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCNC-201ENST00000326298 POTECB2RU33 542 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 PDE6BP35913 854 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 RIPK4P57078 832 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 PROSER3Q2NL68 480 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 PRPF40BQ6NWY9 871 aaKnown RBP10.76□□□□□ -0.69
CCNC-201ENST00000326298 LRP10Q7Z4F1 713 aa10.76□□□□□ -0.69
CCNC-201ENST00000326298 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
CCNC-201ENST00000326298 LMNB1P20700 586 aa10.75□□□□□ -0.69
CCNC-201ENST00000326298 NEUROD2Q15784 382 aa10.75□□□□□ -0.69
CCNC-201ENST00000326298 CLEC4GQ6UXB4 293 aa10.75□□□□□ -0.69
CCNC-201ENST00000326298 NUTM1Q86Y26 1132 aa10.75□□□□□ -0.69
CCNC-201ENST00000326298 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
CCNC-201ENST00000326298 TNRC6CQ9HCJ0 1690 aaKnown RBP10.75□□□□□ -0.69
CCNC-201ENST00000326298 LAMB4A4D0S4 1761 aa10.75□□□□□ -0.69
CCNC-201ENST00000326298 FER1L6Q2WGJ9 1857 aa10.75□□□□□ -0.69
CCNC-201ENST00000326298 TMPOP42166 694 aaKnown RBP10.74□□□□□ -0.69
CCNC-201ENST00000326298 PDIA6Q15084 440 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 NPM2Q86SE8 214 aaKnown RBP10.74□□□□□ -0.69
CCNC-201ENST00000326298 C7orf43Q8WVR3 580 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 ZNF428Q96B54 188 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 ZBTB3Q9H5J0 574 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 UBN2Q6ZU65 1347 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 RALBP1Q15311 655 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 DNAJC5GQ8N7S2 189 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 TIAM2Q8IVF5 1701 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 MAPK8IP3Q9UPT6 1336 aa10.74□□□□□ -0.69
CCNC-201ENST00000326298 NPHP1O15259 732 aa10.73□□□□□ -0.69
CCNC-201ENST00000326298 GPTP24298 496 aa10.73□□□□□ -0.69
CCNC-201ENST00000326298 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
CCNC-201ENST00000326298 TRIM35Q9UPQ4 493 aa10.73□□□□□ -0.69
CCNC-201ENST00000326298 KLRG2A4D1S0 409 aaPredicted RBP10.73□□□□□ -0.69
CCNC-201ENST00000326298 ST5P78524 1137 aa10.73□□□□□ -0.69
CCNC-201ENST00000326298 TSPYL4Q9UJ04 414 aa10.73□□□□□ -0.69
CCNC-201ENST00000326298 ADAMTS8Q9UP79 889 aa10.73□□□□□ -0.69
CCNC-201ENST00000326298 GLTPD2A6NH11 291 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 POTEIP0CG38 1075 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 POTEJP0CG39 1038 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 EIF2S2P20042 333 aaKnown RBP10.72□□□□□ -0.69
CCNC-201ENST00000326298 ERFEQ4G0M1 354 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 MASTLQ96GX5 879 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 NUP98P52948 1817 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 MYBBP1AQ9BQG0 1328 aaKnown RBP10.72□□□□□ -0.69
CCNC-201ENST00000326298 NEFMP07197 916 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 SUSD4Q5VX71 490 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 STYK1Q6J9G0 422 aa10.72□□□□□ -0.69
CCNC-201ENST00000326298 MAP3K15Q6ZN16 1313 aa10.71□□□□□ -0.69
CCNC-201ENST00000326298 KDM2BQ8NHM5 1336 aa10.71□□□□□ -0.69
CCNC-201ENST00000326298 TPTE2Q6XPS3 522 aa10.71□□□□□ -0.69
CCNC-201ENST00000326298 SYNE4Q8N205 404 aa10.71□□□□□ -0.69
CCNC-201ENST00000326298 PNISRQ8TF01 805 aaKnown RBP10.71□□□□□ -0.69
CCNC-201ENST00000326298 ZNF652Q9Y2D9 606 aa10.71□□□□□ -0.69
CCNC-201ENST00000326298 DDNO94850 711 aaPredicted RBP10.7□□□□□ -0.7
CCNC-201ENST00000326298 CCDC184Q52MB2 194 aa10.7□□□□□ -0.7
CCNC-201ENST00000326298 RBM46Q8TBY0 533 aaKnown RBP10.7□□□□□ -0.7
CCNC-201ENST00000326298 CNKSR1Q969H4 720 aa10.7□□□□□ -0.7
CCNC-201ENST00000326298 ZNF34Q8IZ26 560 aa10.7□□□□□ -0.7
CCNC-201ENST00000326298 TAOK3Q9H2K8 898 aa10.7□□□□□ -0.7
CCNC-201ENST00000326298 PRKRIP1Q9H875 184 aaPredicted RBP10.7□□□□□ -0.7
CCNC-201ENST00000326298 ZNF277Q9NRM2 450 aaPredicted RBP10.7□□□□□ -0.7
CCNC-201ENST00000326298 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
CCNC-201ENST00000326298 ARFGEF2Q9Y6D5 1785 aa10.69□□□□□ -0.7
CCNC-201ENST00000326298 ERVV-1B6SEH8 477 aa10.69□□□□□ -0.7
CCNC-201ENST00000326298 NPR1P16066 1061 aa10.69□□□□□ -0.7
CCNC-201ENST00000326298 COL4A5P29400 1685 aa10.69□□□□□ -0.7
CCNC-201ENST00000326298 DICER1Q9UPY3 1922 aaKnown RBP10.69□□□□□ -0.7
CCNC-201ENST00000326298 NTSR2O95665 410 aa10.69□□□□□ -0.7
CCNC-201ENST00000326298 CRY2Q49AN0 593 aa10.69□□□□□ -0.7
CCNC-201ENST00000326298 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
CCNC-201ENST00000326298 CHL1O00533 1208 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 TCERG1O14776 1098 aaKnown RBP10.68□□□□□ -0.7
CCNC-201ENST00000326298 APLP1P51693 650 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 AIMP1Q12904 312 aaKnown RBP10.68□□□□□ -0.7
CCNC-201ENST00000326298 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
CCNC-201ENST00000326298 C16orf71Q8IYS4 520 aaPredicted RBP10.68□□□□□ -0.7
CCNC-201ENST00000326298 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 LTBP3Q9NS15 1303 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 WDR90Q96KV7 1748 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 VEGFAP15692 232 aaPredicted RBP10.68□□□□□ -0.7
CCNC-201ENST00000326298 KIF6Q6ZMV9 814 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 COPS6Q7L5N1 327 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 RUNDC1Q96C34 613 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 ZNF541Q9H0D2 1346 aa10.68□□□□□ -0.7
CCNC-201ENST00000326298 ZC3H4Q9UPT8 1303 aaKnown RBP10.68□□□□□ -0.7
CCNC-201ENST00000326298 RGL2O15211 777 aa10.67□□□□□ -0.7
CCNC-201ENST00000326298 GTF2E1P29083 439 aaPredicted RBP10.67□□□□□ -0.7
CCNC-201ENST00000326298 XAGE3Q8WTP9 111 aa10.67□□□□□ -0.7
CCNC-201ENST00000326298 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
CCNC-201ENST00000326298 CCDC93Q567U6 631 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms