RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 NFKBIEO00221 500 aa28.07■■■□□ 2.08
ME3-201ENST00000323418 EIF4A1P60842 406 aaKnown RBP28.07■■■□□ 2.08
ME3-201ENST00000323418 CNBD1Q8NA66 436 aa28.07■■■□□ 2.08
ME3-201ENST00000323418 PNISRQ8TF01 805 aaKnown RBP28.07■■■□□ 2.08
ME3-201ENST00000323418 DDX10Q13206 875 aaKnown RBP28.05■■■□□ 2.08
ME3-201ENST00000323418 MAPK8IP3Q9UPT6 1336 aa28.05■■■□□ 2.08
ME3-201ENST00000323418 ZC3H4Q9UPT8 1303 aaKnown RBP28.04■■■□□ 2.08
ME3-201ENST00000323418 TOMM70O94826 608 aa28.04■■■□□ 2.08
ME3-201ENST00000323418 PNNQ9H307 717 aaKnown RBP28.04■■■□□ 2.08
ME3-201ENST00000323418 MYBBP1AQ9BQG0 1328 aaKnown RBP28.02■■■□□ 2.08
ME3-201ENST00000323418 SRGNP10124 158 aa28.02■■■□□ 2.08
ME3-201ENST00000323418 LMNB1P20700 586 aa28.02■■■□□ 2.08
ME3-201ENST00000323418 HLFQ16534 295 aa28.02■■■□□ 2.08
ME3-201ENST00000323418 ZNF622Q969S3 477 aaKnown RBP eCLIP28.02■■■□□ 2.08
ME3-201ENST00000323418 ZNF652Q9Y2D9 606 aa28.02■■■□□ 2.08
ME3-201ENST00000323418 ST5P78524 1137 aa28.01■■■□□ 2.07
ME3-201ENST00000323418 WDR90Q96KV7 1748 aa28.01■■■□□ 2.07
ME3-201ENST00000323418 STYK1Q6J9G0 422 aa28■■■□□ 2.07
ME3-201ENST00000323418 KDM2BQ8NHM5 1336 aa27.99■■■□□ 2.07
ME3-201ENST00000323418 NBPF5PQ86XG9 351 aaPredicted RBP27.99■■■□□ 2.07
ME3-201ENST00000323418 KLRG2A4D1S0 409 aaPredicted RBP27.98■■■□□ 2.07
ME3-201ENST00000323418 C21orf2O43822 256 aa27.98■■■□□ 2.07
ME3-201ENST00000323418 TMPOP42166 694 aaKnown RBP27.98■■■□□ 2.07
ME3-201ENST00000323418 NIP7Q9Y221 180 aaKnown RBP eCLIP27.98■■■□□ 2.07
ME3-201ENST00000323418 ANKRD36CQ5JPF3 1778 aa27.96■■■□□ 2.07
ME3-201ENST00000323418 LTBP3Q9NS15 1303 aa27.96■■■□□ 2.07
ME3-201ENST00000323418 RIPK4P57078 832 aa27.96■■■□□ 2.07
ME3-201ENST00000323418 PRPF40BQ6NWY9 871 aaKnown RBP27.96■■■□□ 2.07
ME3-201ENST00000323418 RBM46Q8TBY0 533 aaKnown RBP27.96■■■□□ 2.07
ME3-201ENST00000323418 CNKSR1Q969H4 720 aa27.96■■■□□ 2.07
ME3-201ENST00000323418 MASTLQ96GX5 879 aa27.96■■■□□ 2.07
ME3-201ENST00000323418 TTLL7Q6ZT98 887 aa27.95■■■□□ 2.06
ME3-201ENST00000323418 LRP10Q7Z4F1 713 aa27.95■■■□□ 2.06
ME3-201ENST00000323418 MAP3K15Q6ZN16 1313 aa27.94■■■□□ 2.06
ME3-201ENST00000323418 ERVV-1B6SEH8 477 aa27.94■■■□□ 2.06
ME3-201ENST00000323418 NPHP1O15259 732 aa27.94■■■□□ 2.06
ME3-201ENST00000323418 RRAGCQ9HB90 399 aa27.94■■■□□ 2.06
ME3-201ENST00000323418 ZNF219Q9P2Y4 722 aaPredicted RBP27.94■■■□□ 2.06
ME3-201ENST00000323418 ERBB4Q15303 1308 aa27.93■■■□□ 2.06
ME3-201ENST00000323418 C7orf43Q8WVR3 580 aa27.93■■■□□ 2.06
ME3-201ENST00000323418 TSPYL4Q9UJ04 414 aa27.93■■■□□ 2.06
ME3-201ENST00000323418 ABCC12Q96J65 1359 aa27.93■■■□□ 2.06
ME3-201ENST00000323418 GLTPD2A6NH11 291 aa27.92■■■□□ 2.06
ME3-201ENST00000323418 TPTE2Q6XPS3 522 aa27.92■■■□□ 2.06
ME3-201ENST00000323418 BABAM1Q9NWV8 329 aa27.92■■■□□ 2.06
ME3-201ENST00000323418 RRP7AQ9Y3A4 280 aaKnown RBP27.92■■■□□ 2.06
ME3-201ENST00000323418 IBTKQ9P2D0 1353 aaPredicted RBP27.91■■■□□ 2.06
ME3-201ENST00000323418 NGEFQ8N5V2 710 aa27.91■■■□□ 2.06
ME3-201ENST00000323418 RIC1Q4ADV7 1423 aa27.91■■■□□ 2.06
ME3-201ENST00000323418 UBN2Q6ZU65 1347 aa27.91■■■□□ 2.06
ME3-201ENST00000323418 MYL6BP14649 208 aa27.9■■■□□ 2.06
ME3-201ENST00000323418 NPR1P16066 1061 aa27.9■■■□□ 2.06
ME3-201ENST00000323418 PDIA6Q15084 440 aa27.9■■■□□ 2.06
ME3-201ENST00000323418 SNED1Q8TER0 1413 aa27.9■■■□□ 2.06
ME3-201ENST00000323418 CCDC146Q8IYE0 955 aa27.89■■■□□ 2.06
ME3-201ENST00000323418 FAM177BA6PVY3 158 aa27.88■■■□□ 2.05
ME3-201ENST00000323418 APLP1P51693 650 aa27.88■■■□□ 2.05
ME3-201ENST00000323418 LMOD3Q0VAK6 560 aa27.88■■■□□ 2.05
ME3-201ENST00000323418 TAOK3Q9H2K8 898 aa27.88■■■□□ 2.05
ME3-201ENST00000323418 LAMB2P55268 1798 aa27.88■■■□□ 2.05
ME3-201ENST00000323418 POTECB2RU33 542 aa27.87■■■□□ 2.05
ME3-201ENST00000323418 PRKRIP1Q9H875 184 aaPredicted RBP27.87■■■□□ 2.05
ME3-201ENST00000323418 TRIM35Q9UPQ4 493 aa27.87■■■□□ 2.05
ME3-201ENST00000323418 FSTL1Q12841 308 aa27.86■■■□□ 2.05
ME3-201ENST00000323418 SOGA3Q5TF21 947 aa27.86■■■□□ 2.05
ME3-201ENST00000323418 KIF6Q6ZMV9 814 aa27.86■■■□□ 2.05
ME3-201ENST00000323418 C16orf71Q8IYS4 520 aaPredicted RBP27.86■■■□□ 2.05
ME3-201ENST00000323418 RUNDC1Q96C34 613 aa27.86■■■□□ 2.05
ME3-201ENST00000323418 ZBTB3Q9H5J0 574 aa27.86■■■□□ 2.05
ME3-201ENST00000323418 CRY2Q49AN0 593 aa27.85■■■□□ 2.05
ME3-201ENST00000323418 ZNF34Q8IZ26 560 aa27.85■■■□□ 2.05
ME3-201ENST00000323418 PROSER3Q2NL68 480 aa27.84■■■□□ 2.05
ME3-201ENST00000323418 ERFEQ4G0M1 354 aa27.84■■■□□ 2.05
ME3-201ENST00000323418 GIGYF2Q6Y7W6 1299 aaKnown RBP27.84■■■□□ 2.05
ME3-201ENST00000323418 NUTM1Q86Y26 1132 aa27.84■■■□□ 2.05
ME3-201ENST00000323418 DNAJC5GQ8N7S2 189 aa27.84■■■□□ 2.05
ME3-201ENST00000323418 ADAMTS8Q9UP79 889 aa27.84■■■□□ 2.05
ME3-201ENST00000323418 CHL1O00533 1208 aa27.83■■■□□ 2.05
ME3-201ENST00000323418 NYXQ9GZU5 481 aa27.83■■■□□ 2.05
ME3-201ENST00000323418 NTSR2O95665 410 aa27.82■■■□□ 2.04
ME3-201ENST00000323418 GPTP24298 496 aa27.82■■■□□ 2.04
ME3-201ENST00000323418 CCDC93Q567U6 631 aa27.82■■■□□ 2.04
ME3-201ENST00000323418 SUSD4Q5VX71 490 aa27.82■■■□□ 2.04
ME3-201ENST00000323418 OLFM4Q6UX06 510 aa27.82■■■□□ 2.04
ME3-201ENST00000323418 ANXA1P04083 346 aa27.81■■■□□ 2.04
ME3-201ENST00000323418 VEGFAP15692 232 aaPredicted RBP27.81■■■□□ 2.04
ME3-201ENST00000323418 EIF2S2P20042 333 aaKnown RBP27.81■■■□□ 2.04
ME3-201ENST00000323418 NEUROD2Q15784 382 aa27.81■■■□□ 2.04
ME3-201ENST00000323418 SCN4AP35499 1836 aa27.81■■■□□ 2.04
ME3-201ENST00000323418 WDR43Q15061 677 aaKnown RBP eCLIP27.8■■■□□ 2.04
ME3-201ENST00000323418 KRT24Q2M2I5 525 aa27.8■■■□□ 2.04
ME3-201ENST00000323418 GTF2E1P29083 439 aaPredicted RBP27.78■■■□□ 2.04
ME3-201ENST00000323418 FKBP4Q02790 459 aaKnown RBP eCLIP27.78■■■□□ 2.04
ME3-201ENST00000323418 SMC1BQ8NDV3 1235 aa27.78■■■□□ 2.04
ME3-201ENST00000323418 ALDH1B1P30837 517 aa27.77■■■□□ 2.04
ME3-201ENST00000323418 DPY19L2Q6NUT2 758 aa27.77■■■□□ 2.04
ME3-201ENST00000323418 COL4A5P29400 1685 aa27.76■■■□□ 2.03
ME3-201ENST00000323418 HOXA10P31260 410 aaPredicted RBP27.76■■■□□ 2.03
ME3-201ENST00000323418 DDX60Q8IY21 1712 aaKnown RBP27.75■■■□□ 2.03
ME3-201ENST00000323418 HTRA3P83110 453 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms