RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ST5P78524 1137 aa16.37■□□□□ 0.21
TPM3-204ENST00000323144 TAF7Q15545 349 aaPredicted RBP16.37■□□□□ 0.21
TPM3-204ENST00000323144 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
TPM3-204ENST00000323144 SETDB2Q96T68 719 aa16.37■□□□□ 0.21
TPM3-204ENST00000323144 NPHP1O15259 732 aa16.36■□□□□ 0.21
TPM3-204ENST00000323144 C21orf2O43822 256 aa16.36■□□□□ 0.21
TPM3-204ENST00000323144 LMNB1P20700 586 aa16.36■□□□□ 0.21
TPM3-204ENST00000323144 PDE6BP35913 854 aa16.36■□□□□ 0.21
TPM3-204ENST00000323144 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
TPM3-204ENST00000323144 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
TPM3-204ENST00000323144 TOMM70O94826 608 aa16.35■□□□□ 0.21
TPM3-204ENST00000323144 NEFMP07197 916 aa16.35■□□□□ 0.21
TPM3-204ENST00000323144 HLFQ16534 295 aa16.35■□□□□ 0.21
TPM3-204ENST00000323144 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
TPM3-204ENST00000323144 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
TPM3-204ENST00000323144 ZNF652Q9Y2D9 606 aa16.35■□□□□ 0.21
TPM3-204ENST00000323144 FAM177BA6PVY3 158 aa16.34■□□□□ 0.21
TPM3-204ENST00000323144 EIF4A1P60842 406 aaKnown RBP16.34■□□□□ 0.21
TPM3-204ENST00000323144 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
TPM3-204ENST00000323144 MYBBP1AQ9BQG0 1328 aaKnown RBP16.34■□□□□ 0.21
TPM3-204ENST00000323144 SRGNP10124 158 aa16.33■□□□□ 0.2
TPM3-204ENST00000323144 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
TPM3-204ENST00000323144 COL4A5P29400 1685 aa16.33■□□□□ 0.2
TPM3-204ENST00000323144 DDX60Q8IY21 1712 aaKnown RBP16.33■□□□□ 0.2
TPM3-204ENST00000323144 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
TPM3-204ENST00000323144 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
TPM3-204ENST00000323144 STYK1Q6J9G0 422 aa16.32■□□□□ 0.2
TPM3-204ENST00000323144 CLEC4GQ6UXB4 293 aa16.32■□□□□ 0.2
TPM3-204ENST00000323144 TTLL7Q6ZT98 887 aa16.32■□□□□ 0.2
TPM3-204ENST00000323144 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
TPM3-204ENST00000323144 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
TPM3-204ENST00000323144 RBM46Q8TBY0 533 aaKnown RBP16.32■□□□□ 0.2
TPM3-204ENST00000323144 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
TPM3-204ENST00000323144 LTBP3Q9NS15 1303 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 MYL6BP14649 208 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 HTRA3P83110 453 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 RALBP1Q15311 655 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 SLC51AQ86UW1 340 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 CCDC146Q8IYE0 955 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
TPM3-204ENST00000323144 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
TPM3-204ENST00000323144 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
TPM3-204ENST00000323144 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
TPM3-204ENST00000323144 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
TPM3-204ENST00000323144 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
TPM3-204ENST00000323144 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
TPM3-204ENST00000323144 MASTLQ96GX5 879 aa16.3■□□□□ 0.2
TPM3-204ENST00000323144 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
TPM3-204ENST00000323144 ZBTB3Q9H5J0 574 aa16.3■□□□□ 0.2
TPM3-204ENST00000323144 TSPYL4Q9UJ04 414 aa16.3■□□□□ 0.2
TPM3-204ENST00000323144 SCN4AP35499 1836 aa16.3■□□□□ 0.2
TPM3-204ENST00000323144 LRRC37AA6NMS7 1700 aa16.29■□□□□ 0.2
TPM3-204ENST00000323144 APLP1P51693 650 aa16.29■□□□□ 0.2
TPM3-204ENST00000323144 CNKSR1Q969H4 720 aa16.29■□□□□ 0.2
TPM3-204ENST00000323144 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 RGL2O15211 777 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 GPTP24298 496 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 TMPOP42166 694 aaKnown RBP16.28■□□□□ 0.2
TPM3-204ENST00000323144 PROSER3Q2NL68 480 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 TAF1P21675 1872 aa16.28■□□□□ 0.2
TPM3-204ENST00000323144 ANXA1P04083 346 aa16.27■□□□□ 0.2
TPM3-204ENST00000323144 NPR1P16066 1061 aa16.27■□□□□ 0.2
TPM3-204ENST00000323144 RIPK4P57078 832 aa16.27■□□□□ 0.2
TPM3-204ENST00000323144 ERFEQ4G0M1 354 aa16.27■□□□□ 0.2
TPM3-204ENST00000323144 LRP10Q7Z4F1 713 aa16.27■□□□□ 0.2
TPM3-204ENST00000323144 COL4A1P02462 1669 aa16.27■□□□□ 0.19
TPM3-204ENST00000323144 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
TPM3-204ENST00000323144 KLRG2A4D1S0 409 aaPredicted RBP16.26■□□□□ 0.19
TPM3-204ENST00000323144 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
TPM3-204ENST00000323144 CCDC93Q567U6 631 aa16.26■□□□□ 0.19
TPM3-204ENST00000323144 C7orf43Q8WVR3 580 aa16.26■□□□□ 0.19
TPM3-204ENST00000323144 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
TPM3-204ENST00000323144 ZNF541Q9H0D2 1346 aa16.25■□□□□ 0.19
TPM3-204ENST00000323144 POTECB2RU33 542 aa16.25■□□□□ 0.19
TPM3-204ENST00000323144 FSTL1Q12841 308 aa16.25■□□□□ 0.19
TPM3-204ENST00000323144 PDIA6Q15084 440 aa16.25■□□□□ 0.19
TPM3-204ENST00000323144 ERVV-1B6SEH8 477 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 NTSR2O95665 410 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 NEUROD2Q15784 382 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 TPTE2Q6XPS3 522 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 SMC1BQ8NDV3 1235 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 DUOX1Q9NRD9 1551 aa16.24■□□□□ 0.19
TPM3-204ENST00000323144 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
TPM3-204ENST00000323144 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
TPM3-204ENST00000323144 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
TPM3-204ENST00000323144 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
TPM3-204ENST00000323144 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
TPM3-204ENST00000323144 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
TPM3-204ENST00000323144 POTEIP0CG38 1075 aa16.22■□□□□ 0.19
TPM3-204ENST00000323144 POTEJP0CG39 1038 aa16.22■□□□□ 0.19
TPM3-204ENST00000323144 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
TPM3-204ENST00000323144 FKBP4Q02790 459 aaKnown RBP eCLIP16.22■□□□□ 0.19
TPM3-204ENST00000323144 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
TPM3-204ENST00000323144 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms