RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 AMOTQ4VCS5 1084 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 KIF6Q6ZMV9 814 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 C17orf53Q8N3J3 647 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-201ENST00000321442 CGNQ9P2M7 1197 aaKnown RBP19.31■□□□□ 0.68
SFXN1-201ENST00000321442 HOOK1Q9UJC3 728 aaKnown RBP19.31■□□□□ 0.68
SFXN1-201ENST00000321442 PKP1Q13835 747 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 HSP90B2PQ58FF3 399 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.31■□□□□ 0.682e-6■□□□□ 10.8
SFXN1-201ENST00000321442 NPHP3Q7Z494 1330 aa19.31■□□□□ 0.68
SFXN1-201ENST00000321442 IPO7O95373 1038 aaKnown RBP19.3■□□□□ 0.68
SFXN1-201ENST00000321442 PHAXQ9H814 394 aaKnown RBP19.3■□□□□ 0.68
SFXN1-201ENST00000321442 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
SFXN1-201ENST00000321442 UBAP1LF5GYI3 381 aa19.3■□□□□ 0.68
SFXN1-201ENST00000321442 DNM1Q05193 864 aaKnown RBP19.3■□□□□ 0.68
SFXN1-201ENST00000321442 CEP85Q6P2H3 762 aa19.3■□□□□ 0.68
SFXN1-201ENST00000321442 DNAAF4Q8WXU2 420 aa19.3■□□□□ 0.68
SFXN1-201ENST00000321442 ERVK-7P63135 1459 aa19.3■□□□□ 0.68
SFXN1-201ENST00000321442 ZSCAN22P10073 491 aaPredicted RBP19.3■□□□□ 0.68
SFXN1-201ENST00000321442 CCDC186Q7Z3E2 898 aa19.3■□□□□ 0.68
SFXN1-201ENST00000321442 PTPRCP08575 1304 aa19.29■□□□□ 0.68
SFXN1-201ENST00000321442 MTMR7Q9Y216 660 aa19.29■□□□□ 0.68
SFXN1-201ENST00000321442 ZNF521Q96K83 1311 aa19.29■□□□□ 0.68
SFXN1-201ENST00000321442 CNNM1Q9NRU3 951 aa19.29■□□□□ 0.68
SFXN1-201ENST00000321442 IFNL2Q8IZJ0 200 aa19.29■□□□□ 0.68
SFXN1-201ENST00000321442 TSC1Q92574 1164 aa19.29■□□□□ 0.68
SFXN1-201ENST00000321442 FLT4P35916 1363 aa19.29■□□□□ 0.68
SFXN1-201ENST00000321442 FKBP4Q02790 459 aaKnown RBP eCLIP19.28■□□□□ 0.68
SFXN1-201ENST00000321442 TRMT2AQ8IZ69 625 aaKnown RBP19.28■□□□□ 0.68
SFXN1-201ENST00000321442 NOL7Q9UMY1 257 aaKnown RBP19.28■□□□□ 0.68
SFXN1-201ENST00000321442 PRIMPOLQ96LW4 560 aa19.28■□□□□ 0.68
SFXN1-201ENST00000321442 RAD21O60216 631 aa19.28■□□□□ 0.68
SFXN1-201ENST00000321442 CPA1P15085 419 aa19.28■□□□□ 0.68
SFXN1-201ENST00000321442 UBE3BQ7Z3V4 1068 aa19.28■□□□□ 0.68
SFXN1-201ENST00000321442 UBXN4Q92575 508 aa19.28■□□□□ 0.68
SFXN1-201ENST00000321442 SH2B1Q9NRF2 756 aaPredicted RBP19.28■□□□□ 0.68
SFXN1-201ENST00000321442 CD2BP2O95400 341 aaKnown RBP19.27■□□□□ 0.68
SFXN1-201ENST00000321442 PHF23Q9BUL5 403 aaPredicted RBP19.27■□□□□ 0.68
SFXN1-201ENST00000321442 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.68
SFXN1-201ENST00000321442 A0A087WZG4 1122 aa19.27■□□□□ 0.67
SFXN1-201ENST00000321442 ANKRD20A12PQ8NF67 263 aa19.27■□□□□ 0.67
SFXN1-201ENST00000321442 TMX4Q9H1E5 349 aaPredicted RBP19.27■□□□□ 0.67
SFXN1-201ENST00000321442 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.27■□□□□ 0.67
SFXN1-201ENST00000321442 V9GYY5 206 aaPredicted RBP19.27■□□□□ 0.67
SFXN1-201ENST00000321442 RRP12Q5JTH9 1297 aaKnown RBP19.26■□□□□ 0.67
SFXN1-201ENST00000321442 LMBRD1Q9NUN5 540 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 EXOC5O00471 708 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 TMEM63CQ9P1W3 806 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 BIN1O00499 593 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 CWF19L2Q2TBE0 894 aaKnown RBP19.26■□□□□ 0.67
SFXN1-201ENST00000321442 UVSSAQ2YD98 709 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 KIF18AQ8NI77 898 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 RHPN1Q8TCX5 695 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 USP19O94966 1318 aa19.26■□□□□ 0.67
SFXN1-201ENST00000321442 FSD2A1L4K1 749 aa19.25■□□□□ 0.67
SFXN1-201ENST00000321442 SFPQP23246 707 aaKnown RBP eCLIP19.25■□□□□ 0.67
SFXN1-201ENST00000321442 CCT2P78371 535 aaKnown RBP19.25■□□□□ 0.67
SFXN1-201ENST00000321442 CFAP100Q494V2 611 aa19.25■□□□□ 0.67
SFXN1-201ENST00000321442 HS1BP3Q53T59 392 aa19.25■□□□□ 0.67
SFXN1-201ENST00000321442 COPS6Q7L5N1 327 aa19.25■□□□□ 0.67
SFXN1-201ENST00000321442 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
SFXN1-201ENST00000321442 PUS7Q96PZ0 661 aaKnown RBP19.25■□□□□ 0.67
SFXN1-201ENST00000321442 KDM5CP41229 1560 aa19.25■□□□□ 0.67
SFXN1-201ENST00000321442 DACT1Q9NYF0 836 aa19.25■□□□□ 0.67
SFXN1-201ENST00000321442 ECHDC1Q9NTX5 307 aa19.24■□□□□ 0.67
SFXN1-201ENST00000321442 DHX16O60231 1041 aaKnown RBP19.24■□□□□ 0.67
SFXN1-201ENST00000321442 CLSTN1O94985 981 aa19.24■□□□□ 0.67
SFXN1-201ENST00000321442 CCDC57Q2TAC2 916 aa19.24■□□□□ 0.67
SFXN1-201ENST00000321442 XAGE3Q8WTP9 111 aa19.24■□□□□ 0.67
SFXN1-201ENST00000321442 SETD1BQ9UPS6 1966 aaKnown RBP19.23■□□□□ 0.67
SFXN1-201ENST00000321442 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
SFXN1-201ENST00000321442 KCNQ3O43525 872 aa19.23■□□□□ 0.67
SFXN1-201ENST00000321442 TRPM2O94759 1503 aa19.23■□□□□ 0.67
SFXN1-201ENST00000321442 URI1O94763 535 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-201ENST00000321442 ISM2Q6H9L7 571 aa19.23■□□□□ 0.67
SFXN1-201ENST00000321442 PPP1R1BQ9UD71 204 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-201ENST00000321442 NPC1L1Q9UHC9 1359 aa19.23■□□□□ 0.67
SFXN1-201ENST00000321442 IP6K1Q92551 441 aa19.23■□□□□ 0.67
SFXN1-201ENST00000321442 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
SFXN1-201ENST00000321442 ERICH2A1L162 156 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 KRT32Q14532 448 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 LRRC2Q9BYS8 371 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 BTG4Q9NY30 223 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 KDM5DQ9BY66 1539 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 POLR3GO15318 223 aaPredicted RBP19.22■□□□□ 0.67
SFXN1-201ENST00000321442 MARCH6O60337 910 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 ZNF445P59923 1031 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 ZCRB1Q8TBF4 217 aaKnown RBP19.22■□□□□ 0.67
SFXN1-201ENST00000321442 ANO6Q4KMQ2 910 aa19.22■□□□□ 0.67
SFXN1-201ENST00000321442 PA2G4Q9UQ80 394 aaKnown RBP19.22■□□□□ 0.67
SFXN1-201ENST00000321442 FAM173BQ6P4H8 233 aa19.21■□□□□ 0.67
SFXN1-201ENST00000321442 ABCC3O15438 1527 aa19.21■□□□□ 0.67
SFXN1-201ENST00000321442 AK2P54819 239 aa19.21■□□□□ 0.67
SFXN1-201ENST00000321442 GADD45BO75293 160 aaPredicted RBP19.21■□□□□ 0.67
SFXN1-201ENST00000321442 F13A1P00488 732 aa19.21■□□□□ 0.67
SFXN1-201ENST00000321442 CCDC70Q6NSX1 233 aa19.21■□□□□ 0.67
SFXN1-201ENST00000321442 TMX1Q9H3N1 280 aa19.21■□□□□ 0.67
SFXN1-201ENST00000321442 DDX19AQ9NUU7 478 aaKnown RBP19.21■□□□□ 0.67
SFXN1-201ENST00000321442 PLEKHG3A1L390 1219 aa19.21■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms