RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ALDH1L1O75891 902 aa10.49□□□□□ -0.73
CLK1-201ENST00000321356 FAM184AQ8NB25 1140 aa10.49□□□□□ -0.73
CLK1-201ENST00000321356 GDPD2Q9HCC8 539 aa10.49□□□□□ -0.73
CLK1-201ENST00000321356 SYT1P21579 422 aa10.48□□□□□ -0.73
CLK1-201ENST00000321356 CWC27Q6UX04 472 aaKnown RBP10.48□□□□□ -0.73
CLK1-201ENST00000321356 RNF214Q8ND24 703 aa10.48□□□□□ -0.73
CLK1-201ENST00000321356 TM6SF1Q9BZW5 370 aa10.48□□□□□ -0.73
CLK1-201ENST00000321356 DBF4Q9UBU7 674 aaPredicted RBP10.48□□□□□ -0.73
CLK1-201ENST00000321356 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.48□□□□□ -0.73
CLK1-201ENST00000321356 PXDNQ92626 1479 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 SETD1BQ9UPS6 1966 aaKnown RBP10.47□□□□□ -0.73
CLK1-201ENST00000321356 STX6O43752 255 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 TEFQ10587 303 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 CSPP1Q1MSJ5 1256 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 UVSSAQ2YD98 709 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 CCDC183Q5T5S1 534 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 ECHDC1Q9NTX5 307 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 HYPKQ9NX55 129 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 SLIT3O75094 1523 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 BTBD11A6QL63 1104 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 F13A1P00488 732 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 ANXA1P04083 346 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 UBE2HP62256 183 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 XPCQ01831 940 aaPredicted RBP10.47□□□□□ -0.73
CLK1-201ENST00000321356 VPS53Q5VIR6 699 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 ZNF530Q6P9A1 599 aaPredicted RBP10.47□□□□□ -0.73
CLK1-201ENST00000321356 ERC1Q8IUD2 1116 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 CLASRPQ8N2M8 674 aaKnown RBP10.47□□□□□ -0.73
CLK1-201ENST00000321356 KCNH5Q8NCM2 988 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 ZSWIM6Q9HCJ5 1215 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
CLK1-201ENST00000321356 LETM1O95202 739 aaPredicted RBP10.46□□□□□ -0.74
CLK1-201ENST00000321356 LARGE1O95461 756 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 CASTP20810 708 aaKnown RBP10.46□□□□□ -0.74
CLK1-201ENST00000321356 PTH1RQ03431 593 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 FOXD4L6Q3SYB3 417 aaPredicted RBP10.46□□□□□ -0.74
CLK1-201ENST00000321356 AMOTQ4VCS5 1084 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 PLEKHO1Q53GL0 409 aaPredicted RBP10.46□□□□□ -0.74
CLK1-201ENST00000321356 KSR2Q6VAB6 950 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 FOXD4L3Q6VB84 417 aaPredicted RBP10.46□□□□□ -0.74
CLK1-201ENST00000321356 SNRKQ9NRH2 765 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 SMC3Q9UQE7 1217 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 ATP6V1DQ9Y5K8 247 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 UTYO14607 1347 aa10.46□□□□□ -0.74
CLK1-201ENST00000321356 RNMTO43148 476 aaKnown RBP10.45□□□□□ -0.74
CLK1-201ENST00000321356 GIGYF1O75420 1035 aaPredicted RBP10.45□□□□□ -0.74
CLK1-201ENST00000321356 NECTIN1Q15223 517 aa10.45□□□□□ -0.74
CLK1-201ENST00000321356 C14orf37Q86TY3 774 aa10.45□□□□□ -0.74
CLK1-201ENST00000321356 GPATCH3Q96I76 525 aa10.45□□□□□ -0.74
CLK1-201ENST00000321356 ZSCAN31Q96LW9 406 aaPredicted RBP10.45□□□□□ -0.74
CLK1-201ENST00000321356 SH2B1Q9NRF2 756 aaPredicted RBP10.45□□□□□ -0.74
CLK1-201ENST00000321356 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
CLK1-201ENST00000321356 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
CLK1-201ENST00000321356 MAP3K2Q9Y2U5 619 aa10.45□□□□□ -0.74
CLK1-201ENST00000321356 MRC1P22897 1456 aa10.45□□□□□ -0.74
CLK1-201ENST00000321356 CPA1P15085 419 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 OS9Q13438 667 aaPredicted RBP10.44□□□□□ -0.74
CLK1-201ENST00000321356 PROSER3Q2NL68 480 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 EVI5LQ96CN4 794 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 MTMR6Q9Y217 621 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 CCDC171Q6TFL3 1326 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 ST3GAL1Q11201 340 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 ADCK5Q3MIX3 580 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 LINS1Q8NG48 757 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 LRRC59Q96AG4 307 aaKnown RBP10.44□□□□□ -0.74
CLK1-201ENST00000321356 KAZALD1Q96I82 304 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 JAKMIP1Q96N16 626 aaKnown RBP10.44□□□□□ -0.74
CLK1-201ENST00000321356 FUCA2Q9BTY2 467 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 PDRG1Q9NUG6 133 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 C9orf78Q9NZ63 289 aaPredicted RBP10.44□□□□□ -0.74
CLK1-201ENST00000321356 R3HCC1Q9Y3T6 440 aaKnown RBP10.44□□□□□ -0.74
CLK1-201ENST00000321356 CYP46A1Q9Y6A2 500 aa10.44□□□□□ -0.74
CLK1-201ENST00000321356 IFIT2P09913 472 aaKnown RBP10.43□□□□□ -0.74
CLK1-201ENST00000321356 GJB2P29033 226 aa10.43□□□□□ -0.74
CLK1-201ENST00000321356 GLIPR1L2Q4G1C9 344 aa10.43□□□□□ -0.74
CLK1-201ENST00000321356 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
CLK1-201ENST00000321356 ARHGEF25Q86VW2 580 aa10.43□□□□□ -0.74
CLK1-201ENST00000321356 MAP4K1Q92918 833 aa10.43□□□□□ -0.74
CLK1-201ENST00000321356 LARP6Q9BRS8 491 aaKnown RBP10.43□□□□□ -0.74
CLK1-201ENST00000321356 PDCL3Q9H2J4 239 aa10.43□□□□□ -0.74
CLK1-201ENST00000321356 PA2G4Q9UQ80 394 aaKnown RBP10.43□□□□□ -0.74
CLK1-201ENST00000321356 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLK1-201ENST00000321356 JCADQ9P266 1359 aa10.43□□□□□ -0.74
CLK1-201ENST00000321356 ZNF142P52746 1687 aaPredicted RBP10.42□□□□□ -0.74
CLK1-201ENST00000321356 GRM8O00222 908 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 HIP1O00291 1037 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 SASH1O94885 1247 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 CWF19L2Q2TBE0 894 aaKnown RBP10.42□□□□□ -0.74
CLK1-201ENST00000321356 CCDC83Q8IWF9 413 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
CLK1-201ENST00000321356 KIAA2012Q0VF49 1180 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 C1orf141Q5JVX7 400 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 CREB3L3Q68CJ9 461 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 AACSQ86V21 672 aa10.42□□□□□ -0.74
CLK1-201ENST00000321356 SUCLG2Q96I99 432 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms