RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CCDC9Q9Y3X0 531 aaKnown RBP22.09■■□□□ 1.13
RAB39A-201ENST00000320578 PRIM1P49642 420 aaKnown RBP22.08■■□□□ 1.13
RAB39A-201ENST00000320578 UPF2Q9HAU5 1272 aaKnown RBP22.08■■□□□ 1.13
RAB39A-201ENST00000320578 EXOC6BQ9Y2D4 811 aa22.08■■□□□ 1.13
RAB39A-201ENST00000320578 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.08■■□□□ 1.13
RAB39A-201ENST00000320578 PIP4K2AP48426 406 aaPredicted RBP22.07■■□□□ 1.12
RAB39A-201ENST00000320578 TTC22Q5TAA0 569 aa22.07■■□□□ 1.12
RAB39A-201ENST00000320578 DNAJC10Q8IXB1 793 aa22.07■■□□□ 1.12
RAB39A-201ENST00000320578 DDRGK1Q96HY6 314 aa22.07■■□□□ 1.12
RAB39A-201ENST00000320578 ARFGEF2Q9Y6D5 1785 aa22.07■■□□□ 1.12
RAB39A-201ENST00000320578 SALL3Q9BXA9 1300 aa22.06■■□□□ 1.12
RAB39A-201ENST00000320578 SEC24BO95487 1268 aa22.06■■□□□ 1.12
RAB39A-201ENST00000320578 NPM2Q86SE8 214 aaKnown RBP22.06■■□□□ 1.12
RAB39A-201ENST00000320578 C16orf71Q8IYS4 520 aaPredicted RBP22.06■■□□□ 1.12
RAB39A-201ENST00000320578 KAZALD1Q96I82 304 aa22.06■■□□□ 1.12
RAB39A-201ENST00000320578 SUCLG2Q96I99 432 aa22.06■■□□□ 1.12
RAB39A-201ENST00000320578 DOT1LQ8TEK3 1739 aa22.05■■□□□ 1.12
RAB39A-201ENST00000320578 SMARCA5O60264 1052 aaPredicted RBP22.05■■□□□ 1.12
RAB39A-201ENST00000320578 KIF1BPQ96EK5 621 aa22.05■■□□□ 1.12
RAB39A-201ENST00000320578 RBM42Q9BTD8 480 aaKnown RBP22.05■■□□□ 1.12
RAB39A-201ENST00000320578 SURF6O75683 361 aaKnown RBP22.04■■□□□ 1.12
RAB39A-201ENST00000320578 CYP19A1P11511 503 aaPredicted RBP22.04■■□□□ 1.12
RAB39A-201ENST00000320578 TTLL7Q6ZT98 887 aa22.04■■□□□ 1.12
RAB39A-201ENST00000320578 STAP2Q9UGK3 403 aa22.04■■□□□ 1.12
RAB39A-201ENST00000320578 AOX1Q06278 1338 aa22.04■■□□□ 1.12
RAB39A-201ENST00000320578 SLC4A9Q96Q91 983 aa22.03■■□□□ 1.12
RAB39A-201ENST00000320578 NUP188Q5SRE5 1749 aa22.03■■□□□ 1.12
RAB39A-201ENST00000320578 TRIM28Q13263 835 aaKnown RBP22.03■■□□□ 1.12
RAB39A-201ENST00000320578 CCDC191Q8NCU4 936 aa22.03■■□□□ 1.12
RAB39A-201ENST00000320578 SYTL4Q96C24 671 aaPredicted RBP22.03■■□□□ 1.12
RAB39A-201ENST00000320578 USP21Q9UK80 565 aa22.03■■□□□ 1.12
RAB39A-201ENST00000320578 H7C1W4 665 aa22.02■■□□□ 1.12
RAB39A-201ENST00000320578 GSPT1P15170 499 aaKnown RBP22.02■■□□□ 1.12
RAB39A-201ENST00000320578 PDE1AP54750 535 aa22.02■■□□□ 1.12
RAB39A-201ENST00000320578 ERC1Q8IUD2 1116 aa22.02■■□□□ 1.12
RAB39A-201ENST00000320578 BICC1Q9H694 974 aaKnown RBP22.02■■□□□ 1.12
RAB39A-201ENST00000320578 CICQ96RK0 1608 aaPredicted RBP22.01■■□□□ 1.11
RAB39A-201ENST00000320578 APBB1O00213 710 aa22.01■■□□□ 1.11
RAB39A-201ENST00000320578 CASP7P55210 303 aa22.01■■□□□ 1.11
RAB39A-201ENST00000320578 RABL6Q3YEC7 729 aaPredicted RBP22.01■■□□□ 1.11
RAB39A-201ENST00000320578 RHPN1Q8TCX5 695 aa22.01■■□□□ 1.11
RAB39A-201ENST00000320578 OTUD7AQ8TE49 926 aaPredicted RBP22.01■■□□□ 1.11
RAB39A-201ENST00000320578 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
RAB39A-201ENST00000320578 TBC1D32Q96NH3 1257 aa22.01■■□□□ 1.11
RAB39A-201ENST00000320578 MSH5O43196 834 aa22.01■■□□□ 1.11
RAB39A-201ENST00000320578 CDC45O75419 566 aa22.01■■□□□ 1.11
RAB39A-201ENST00000320578 HSPA1LP34931 641 aa22.01■■□□□ 1.11
RAB39A-201ENST00000320578 FAM98CQ17RN3 349 aaKnown RBP22.01■■□□□ 1.11
RAB39A-201ENST00000320578 CWC25Q9NXE8 425 aaPredicted RBP22.01■■□□□ 1.11
RAB39A-201ENST00000320578 ISCA1Q9BUE6 129 aa22■■□□□ 1.11
RAB39A-201ENST00000320578 A0A087WZG4 1122 aa21.99■■□□□ 1.11
RAB39A-201ENST00000320578 TCIRG1Q13488 830 aa21.99■■□□□ 1.11
RAB39A-201ENST00000320578 KIF6Q6ZMV9 814 aa21.99■■□□□ 1.11
RAB39A-201ENST00000320578 MX1P20591 662 aa21.99■■□□□ 1.11
RAB39A-201ENST00000320578 IL6STP40189 918 aaPredicted RBP21.99■■□□□ 1.11
RAB39A-201ENST00000320578 ATP5J2-PTCD1G3V325 749 aa21.98■■□□□ 1.11
RAB39A-201ENST00000320578 THSD7AQ9UPZ6 1657 aa21.97■■□□□ 1.11
RAB39A-201ENST00000320578 TJP1Q07157 1748 aa21.97■■□□□ 1.11
RAB39A-201ENST00000320578 MAP3K15Q6ZN16 1313 aa21.97■■□□□ 1.11
RAB39A-201ENST00000320578 HSP90AB3PQ58FF7 597 aa21.96■■□□□ 1.11
RAB39A-201ENST00000320578 TBC1D9Q6ZT07 1266 aa21.96■■□□□ 1.11
RAB39A-201ENST00000320578 AFDNP55196 1824 aaKnown RBP21.96■■□□□ 1.11
RAB39A-201ENST00000320578 ERVV-1B6SEH8 477 aa21.96■■□□□ 1.11
RAB39A-201ENST00000320578 UBE3BQ7Z3V4 1068 aa21.96■■□□□ 1.11
RAB39A-201ENST00000320578 ZBTB3Q9H5J0 574 aa21.96■■□□□ 1.11
RAB39A-201ENST00000320578 COPRSQ9NQ92 184 aa21.96■■□□□ 1.11
RAB39A-201ENST00000320578 USP42Q9H9J4 1324 aaKnown RBP21.96■■□□□ 1.11
RAB39A-201ENST00000320578 ZNF831Q5JPB2 1677 aa21.95■■□□□ 1.1
RAB39A-201ENST00000320578 ONECUT3O60422 494 aaPredicted RBP21.95■■□□□ 1.1
RAB39A-201ENST00000320578 GIGYF2Q6Y7W6 1299 aaKnown RBP21.95■■□□□ 1.1
RAB39A-201ENST00000320578 ACSBG1Q96GR2 724 aa21.95■■□□□ 1.1
RAB39A-201ENST00000320578 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
RAB39A-201ENST00000320578 SDSP20132 328 aa21.94■■□□□ 1.1
RAB39A-201ENST00000320578 SIK1P57059 783 aa21.94■■□□□ 1.1
RAB39A-201ENST00000320578 EPHA10Q5JZY3 1008 aa21.94■■□□□ 1.1
RAB39A-201ENST00000320578 MEX3CQ5U5Q3 659 aaKnown RBP21.94■■□□□ 1.1
RAB39A-201ENST00000320578 G3BP1Q13283 466 aaKnown RBP eCLIP21.94■■□□□ 1.1
RAB39A-201ENST00000320578 GJD4Q96KN9 370 aaPredicted RBP21.94■■□□□ 1.1
RAB39A-201ENST00000320578 OS9Q13438 667 aaPredicted RBP21.93■■□□□ 1.1
RAB39A-201ENST00000320578 CLASRPQ8N2M8 674 aaKnown RBP21.93■■□□□ 1.1
RAB39A-201ENST00000320578 C22orf23Q9BZE7 217 aa21.93■■□□□ 1.1
RAB39A-201ENST00000320578 ZBTB1Q9Y2K1 713 aa21.93■■□□□ 1.1
RAB39A-201ENST00000320578 PALLDQ8WX93 1383 aa21.93■■□□□ 1.1
RAB39A-201ENST00000320578 ATRNO75882 1429 aa21.93■■□□□ 1.1
RAB39A-201ENST00000320578 RFX5P48382 616 aaPredicted RBP21.92■■□□□ 1.1
RAB39A-201ENST00000320578 MFAP1P55081 439 aaKnown RBP21.92■■□□□ 1.1
RAB39A-201ENST00000320578 CASC1Q6TDU7 716 aa21.92■■□□□ 1.1
RAB39A-201ENST00000320578 RREB1Q92766 1687 aa21.92■■□□□ 1.1
RAB39A-201ENST00000320578 ATP6V1AP38606 617 aa21.92■■□□□ 1.1
RAB39A-201ENST00000320578 RBM25P49756 843 aaKnown RBP21.92■■□□□ 1.1
RAB39A-201ENST00000320578 EIF5P55010 431 aaKnown RBP21.92■■□□□ 1.1
RAB39A-201ENST00000320578 IL1RAPL2Q9NP60 686 aa21.92■■□□□ 1.1
RAB39A-201ENST00000320578 CCDC87Q9NVE4 849 aa21.92■■□□□ 1.1
RAB39A-201ENST00000320578 TTC41PQ6P2S7 1318 aa21.92■■□□□ 1.1
RAB39A-201ENST00000320578 AFF2P51816 1311 aa21.91■■□□□ 1.1
RAB39A-201ENST00000320578 FOXO4P98177 505 aa21.91■■□□□ 1.1
RAB39A-201ENST00000320578 PLA2G12BQ9BX93 195 aa21.91■■□□□ 1.1
RAB39A-201ENST00000320578 TRPC5Q9UL62 973 aaPredicted RBP21.91■■□□□ 1.1
RAB39A-201ENST00000320578 PCCAP05165 728 aaPredicted RBP21.9■■□□□ 1.1
RAB39A-201ENST00000320578 INTS5Q6P9B9 1019 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms