RNA–Protein interactions for RNA: ENST00000320188.9

SWI5-201, Transcript of SWI5 homologous recombination repair protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SWI5, Length 980 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWI5-201ENST00000320188 SRGNP10124 158 aa24.19■■□□□ 1.46
SWI5-201ENST00000320188 CNTNAP1P78357 1384 aa24.18■■□□□ 1.46
SWI5-201ENST00000320188 CAMTA2O94983 1202 aa24.18■■□□□ 1.46
SWI5-201ENST00000320188 LDHDQ86WU2 507 aa24.18■■□□□ 1.46
SWI5-201ENST00000320188 U2SURPO15042 1029 aaKnown RBP24.17■■□□□ 1.46
SWI5-201ENST00000320188 POTEIP0CG38 1075 aa24.17■■□□□ 1.46
SWI5-201ENST00000320188 POTEJP0CG39 1038 aa24.17■■□□□ 1.46
SWI5-201ENST00000320188 AIDAQ96BJ3 306 aa24.17■■□□□ 1.46
SWI5-201ENST00000320188 COL3A1P02461 1466 aaPredicted RBP24.16■■□□□ 1.46
SWI5-201ENST00000320188 CCDC93Q567U6 631 aa24.16■■□□□ 1.46
SWI5-201ENST00000320188 CC2D1BQ5T0F9 858 aaKnown RBP24.16■■□□□ 1.46
SWI5-201ENST00000320188 DZIP3Q86Y13 1208 aaKnown RBP24.16■■□□□ 1.46
SWI5-201ENST00000320188 IL17REQ8NFR9 667 aa24.16■■□□□ 1.46
SWI5-201ENST00000320188 L3MBTL3Q96JM7 780 aaPredicted RBP24.16■■□□□ 1.46
SWI5-201ENST00000320188 A1BGP04217 495 aa24.15■■□□□ 1.46
SWI5-201ENST00000320188 ZNF652Q9Y2D9 606 aa24.15■■□□□ 1.46
SWI5-201ENST00000320188 KIF7Q2M1P5 1343 aa24.14■■□□□ 1.46
SWI5-201ENST00000320188 PASKQ96RG2 1323 aa24.14■■□□□ 1.46
SWI5-201ENST00000320188 NBPF5PQ86XG9 351 aaPredicted RBP24.14■■□□□ 1.45
SWI5-201ENST00000320188 FOXN1O15353 648 aa24.13■■□□□ 1.45
SWI5-201ENST00000320188 TAF1DQ9H5J8 278 aaPredicted RBP24.13■■□□□ 1.45
SWI5-201ENST00000320188 PRDM10Q9NQV6 1147 aa24.13■■□□□ 1.45
SWI5-201ENST00000320188 TMEM88BA6NKF7 163 aa24.12■■□□□ 1.45
SWI5-201ENST00000320188 BTBD11A6QL63 1104 aa24.12■■□□□ 1.45
SWI5-201ENST00000320188 CEMIPQ8WUJ3 1361 aa24.12■■□□□ 1.45
SWI5-201ENST00000320188 NPR1P16066 1061 aa24.11■■□□□ 1.45
SWI5-201ENST00000320188 CTCFP49711 727 aaPredicted RBP24.11■■□□□ 1.45
SWI5-201ENST00000320188 EAPPQ56P03 285 aaPredicted RBP24.11■■□□□ 1.45
SWI5-201ENST00000320188 CLEC4GQ6UXB4 293 aa24.11■■□□□ 1.45
SWI5-201ENST00000320188 FKBP4Q02790 459 aaKnown RBP eCLIP24.1■■□□□ 1.45
SWI5-201ENST00000320188 ADAMTSL1Q8N6G6 1762 aa24.1■■□□□ 1.45
SWI5-201ENST00000320188 HACL1Q9UJ83 578 aa24.09■■□□□ 1.45
SWI5-201ENST00000320188 CLEC11AQ9Y240 323 aa24.09■■□□□ 1.45
SWI5-201ENST00000320188 RTKN2Q8IZC4 609 aa24.08■■□□□ 1.45
SWI5-201ENST00000320188 ZNF541Q9H0D2 1346 aa24.08■■□□□ 1.44
SWI5-201ENST00000320188 PER1O15534 1290 aaPredicted RBP24.07■■□□□ 1.44
SWI5-201ENST00000320188 VEGFBP49765 207 aa24.07■■□□□ 1.44
SWI5-201ENST00000320188 TPTE2Q6XPS3 522 aa24.07■■□□□ 1.44
SWI5-201ENST00000320188 C7orf43Q8WVR3 580 aa24.07■■□□□ 1.44
SWI5-201ENST00000320188 ZNF277Q9NRM2 450 aaPredicted RBP24.07■■□□□ 1.44
SWI5-201ENST00000320188 NPC1L1Q9UHC9 1359 aa24.06■■□□□ 1.44
SWI5-201ENST00000320188 KCNQ3O43525 872 aa24.06■■□□□ 1.44
SWI5-201ENST00000320188 PNMA8AQ86V59 439 aaPredicted RBP24.06■■□□□ 1.44
SWI5-201ENST00000320188 EPHX2P34913 555 aa24.05■■□□□ 1.44
SWI5-201ENST00000320188 PIP4K2AP48426 406 aaPredicted RBP24.05■■□□□ 1.44
SWI5-201ENST00000320188 USP16Q9Y5T5 823 aa24.05■■□□□ 1.44
SWI5-201ENST00000320188 LAMB4A4D0S4 1761 aa24.05■■□□□ 1.44
SWI5-201ENST00000320188 RGL2O15211 777 aa24.04■■□□□ 1.44
SWI5-201ENST00000320188 ITGBL1O95965 494 aaPredicted RBP24.04■■□□□ 1.44
SWI5-201ENST00000320188 SNRPA1P09661 255 aaKnown RBP24.04■■□□□ 1.44
SWI5-201ENST00000320188 NIP7Q9Y221 180 aaKnown RBP eCLIP24.04■■□□□ 1.44
SWI5-201ENST00000320188 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
SWI5-201ENST00000320188 CNGB1Q14028 1251 aaPredicted RBP24.03■■□□□ 1.44
SWI5-201ENST00000320188 RTF1Q92541 710 aaKnown RBP24.03■■□□□ 1.44
SWI5-201ENST00000320188 KLRG2A4D1S0 409 aaPredicted RBP24.02■■□□□ 1.44
SWI5-201ENST00000320188 ALDH1B1P30837 517 aa24.02■■□□□ 1.44
SWI5-201ENST00000320188 IARSP41252 1262 aaKnown RBP24.02■■□□□ 1.44
SWI5-201ENST00000320188 CFAP53Q96M91 514 aa24.02■■□□□ 1.44
SWI5-201ENST00000320188 WBP1LQ9NX94 342 aa24.02■■□□□ 1.44
SWI5-201ENST00000320188 RNF123Q5XPI4 1314 aa24.02■■□□□ 1.44
SWI5-201ENST00000320188 GTF2E1P29083 439 aaPredicted RBP24.01■■□□□ 1.43
SWI5-201ENST00000320188 CCER1Q8TC90 406 aaPredicted RBP24.01■■□□□ 1.43
SWI5-201ENST00000320188 NUP98P52948 1817 aa24■■□□□ 1.43
SWI5-201ENST00000320188 TRPM7Q96QT4 1865 aa24■■□□□ 1.43
SWI5-201ENST00000320188 DEFB115Q30KQ5 88 aa24■■□□□ 1.43
SWI5-201ENST00000320188 GPC2Q8N158 579 aa24■■□□□ 1.43
SWI5-201ENST00000320188 JDP2Q8WYK2 163 aa24■■□□□ 1.43
SWI5-201ENST00000320188 PHACTR3Q96KR7 559 aa24■■□□□ 1.43
SWI5-201ENST00000320188 PRAMEF22A3QJZ6 481 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 RASSF10A6NK89 507 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 FAM177BA6PVY3 158 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 FZD9O00144 591 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 LBX1P52954 281 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 CNTROBQ8N137 903 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 SYNE4Q8N205 404 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 ABT1Q9ULW3 272 aaKnown RBP23.99■■□□□ 1.43
SWI5-201ENST00000320188 NUDCQ9Y266 331 aa23.99■■□□□ 1.43
SWI5-201ENST00000320188 MAP2K1Q02750 393 aaPredicted RBP23.98■■□□□ 1.43
SWI5-201ENST00000320188 MAP1SQ66K74 1059 aaPredicted RBP23.98■■□□□ 1.43
SWI5-201ENST00000320188 OLFM4Q6UX06 510 aa23.98■■□□□ 1.43
SWI5-201ENST00000320188 LMOD1P29536 600 aaPredicted RBP23.97■■□□□ 1.43
SWI5-201ENST00000320188 PSMD1Q99460 953 aa23.97■■□□□ 1.43
SWI5-201ENST00000320188 EIF6P56537 245 aaKnown RBP23.96■■□□□ 1.43
SWI5-201ENST00000320188 NYXQ9GZU5 481 aa23.96■■□□□ 1.43
SWI5-201ENST00000320188 WDR33Q9C0J8 1336 aaKnown RBP23.95■■□□□ 1.42
SWI5-201ENST00000320188 CC2D2BQ6DHV5 1058 aa23.95■■□□□ 1.42
SWI5-201ENST00000320188 MCM10Q7L590 875 aa23.95■■□□□ 1.42
SWI5-201ENST00000320188 THSD7BQ9C0I4 1608 aa23.95■■□□□ 1.42
SWI5-201ENST00000320188 NBPF26B4DH59 902 aa23.94■■□□□ 1.42
SWI5-201ENST00000320188 HSPA8P11142 646 aaKnown RBP23.94■■□□□ 1.42
SWI5-201ENST00000320188 NBPF10Q6P3W6 841 aaKnown RBP23.94■■□□□ 1.42
SWI5-201ENST00000320188 NBPF15Q8N660 670 aa23.94■■□□□ 1.42
SWI5-201ENST00000320188 GJA3Q9Y6H8 435 aa23.93■■□□□ 1.42
SWI5-201ENST00000320188 U2AF1L5P0DN76 240 aaPredicted RBP23.92■■□□□ 1.42
SWI5-201ENST00000320188 U2AF1Q01081 240 aaKnown RBP eCLIP23.92■■□□□ 1.42
SWI5-201ENST00000320188 GRIPAP1Q4V328 841 aa23.92■■□□□ 1.42
SWI5-201ENST00000320188 RPGRQ92834 1020 aaKnown RBP23.92■■□□□ 1.42
SWI5-201ENST00000320188 BEGAINQ9BUH8 593 aa23.92■■□□□ 1.42
SWI5-201ENST00000320188 DDX21Q9NR30 783 aaKnown RBP eCLIP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms