RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 WDR90Q96KV7 1748 aa26.64■■□□□ 1.85
SERF1A-201ENST00000317633 DICER1Q9UPY3 1922 aaKnown RBP26.63■■□□□ 1.85
SERF1A-201ENST00000317633 RGL2O15211 777 aa26.63■■□□□ 1.85
SERF1A-201ENST00000317633 C21orf2O43822 256 aa26.63■■□□□ 1.85
SERF1A-201ENST00000317633 PRELPP51888 382 aa26.63■■□□□ 1.85
SERF1A-201ENST00000317633 STYK1Q6J9G0 422 aa26.63■■□□□ 1.85
SERF1A-201ENST00000317633 NBPF5PQ86XG9 351 aaPredicted RBP26.63■■□□□ 1.85
SERF1A-201ENST00000317633 PNISRQ8TF01 805 aaKnown RBP26.63■■□□□ 1.85
SERF1A-201ENST00000317633 PNNQ9H307 717 aaKnown RBP26.63■■□□□ 1.85
SERF1A-201ENST00000317633 ZNF219Q9P2Y4 722 aaPredicted RBP26.63■■□□□ 1.85
SERF1A-201ENST00000317633 CACNA1SQ13698 1873 aa26.63■■□□□ 1.85
SERF1A-201ENST00000317633 VEGFAP15692 232 aaPredicted RBP26.62■■□□□ 1.85
SERF1A-201ENST00000317633 SRGNP10124 158 aa26.61■■□□□ 1.85
SERF1A-201ENST00000317633 SOGA3Q5TF21 947 aa26.61■■□□□ 1.85
SERF1A-201ENST00000317633 DPY19L2Q6NUT2 758 aa26.61■■□□□ 1.85
SERF1A-201ENST00000317633 SMC1BQ8NDV3 1235 aa26.61■■□□□ 1.85
SERF1A-201ENST00000317633 MASTLQ96GX5 879 aa26.61■■□□□ 1.85
SERF1A-201ENST00000317633 LAMB4A4D0S4 1761 aa26.61■■□□□ 1.85
SERF1A-201ENST00000317633 ARFGEF2Q9Y6D5 1785 aa26.61■■□□□ 1.85
SERF1A-201ENST00000317633 SLX4Q8IY92 1834 aa26.6■■□□□ 1.85
SERF1A-201ENST00000317633 NBPF26B4DH59 902 aa26.59■■□□□ 1.85
SERF1A-201ENST00000317633 NBPF10Q6P3W6 841 aaKnown RBP26.59■■□□□ 1.85
SERF1A-201ENST00000317633 TPTE2Q6XPS3 522 aa26.59■■□□□ 1.85
SERF1A-201ENST00000317633 NBPF15Q8N660 670 aa26.59■■□□□ 1.85
SERF1A-201ENST00000317633 DNAJC5GQ8N7S2 189 aa26.59■■□□□ 1.85
SERF1A-201ENST00000317633 MIS18AQ9NYP9 233 aa26.59■■□□□ 1.85
SERF1A-201ENST00000317633 LTBP3Q9NS15 1303 aa26.59■■□□□ 1.85
SERF1A-201ENST00000317633 TAOK3Q9H2K8 898 aa26.58■■□□□ 1.85
SERF1A-201ENST00000317633 NIP7Q9Y221 180 aaKnown RBP eCLIP26.58■■□□□ 1.85
SERF1A-201ENST00000317633 KDM3BQ7LBC6 1761 aa26.57■■□□□ 1.84
SERF1A-201ENST00000317633 ERFEQ4G0M1 354 aa26.57■■□□□ 1.84
SERF1A-201ENST00000317633 IFFO2Q5TF58 517 aa26.57■■□□□ 1.84
SERF1A-201ENST00000317633 PRPF40BQ6NWY9 871 aaKnown RBP26.57■■□□□ 1.84
SERF1A-201ENST00000317633 NFE2L2Q16236 605 aa26.56■■□□□ 1.84
SERF1A-201ENST00000317633 PLEKHF1Q96S99 279 aa26.56■■□□□ 1.84
SERF1A-201ENST00000317633 MAPK8IP3Q9UPT6 1336 aa26.56■■□□□ 1.84
SERF1A-201ENST00000317633 NPR1P16066 1061 aa26.54■■□□□ 1.84
SERF1A-201ENST00000317633 KLRG2A4D1S0 409 aaPredicted RBP26.52■■□□□ 1.84
SERF1A-201ENST00000317633 GTF2E1P29083 439 aaPredicted RBP26.52■■□□□ 1.84
SERF1A-201ENST00000317633 EIF4A1P60842 406 aaKnown RBP26.51■■□□□ 1.83
SERF1A-201ENST00000317633 HLFQ16534 295 aa26.51■■□□□ 1.83
SERF1A-201ENST00000317633 KLRG1Q96E93 195 aa26.51■■□□□ 1.83
SERF1A-201ENST00000317633 NUP98P52948 1817 aa26.51■■□□□ 1.83
SERF1A-201ENST00000317633 FAM177BA6PVY3 158 aa26.5■■□□□ 1.83
SERF1A-201ENST00000317633 ERVV-1B6SEH8 477 aa26.5■■□□□ 1.83
SERF1A-201ENST00000317633 HTRA3P83110 453 aa26.49■■□□□ 1.83
SERF1A-201ENST00000317633 CCDC93Q567U6 631 aa26.49■■□□□ 1.83
SERF1A-201ENST00000317633 KIF6Q6ZMV9 814 aa26.49■■□□□ 1.83
SERF1A-201ENST00000317633 NGEFQ8N5V2 710 aa26.49■■□□□ 1.83
SERF1A-201ENST00000317633 NYXQ9GZU5 481 aa26.49■■□□□ 1.83
SERF1A-201ENST00000317633 ALDH1B1P30837 517 aa26.48■■□□□ 1.83
SERF1A-201ENST00000317633 RALBP1Q15311 655 aa26.48■■□□□ 1.83
SERF1A-201ENST00000317633 C7orf43Q8WVR3 580 aa26.48■■□□□ 1.83
SERF1A-201ENST00000317633 RRP7AQ9Y3A4 280 aaKnown RBP26.48■■□□□ 1.83
SERF1A-201ENST00000317633 POTECB2RU33 542 aa26.47■■□□□ 1.83
SERF1A-201ENST00000317633 THUMPD2Q9BTF0 503 aaKnown RBP26.47■■□□□ 1.83
SERF1A-201ENST00000317633 MAP3K15Q6ZN16 1313 aa26.46■■□□□ 1.83
SERF1A-201ENST00000317633 ERBB4Q15303 1308 aa26.44■■□□□ 1.82
SERF1A-201ENST00000317633 MYL6BP14649 208 aa26.44■■□□□ 1.82
SERF1A-201ENST00000317633 RTKN2Q8IZC4 609 aa26.44■■□□□ 1.82
SERF1A-201ENST00000317633 JMYQ8N9B5 988 aa26.44■■□□□ 1.82
SERF1A-201ENST00000317633 FKBP4Q02790 459 aaKnown RBP eCLIP26.43■■□□□ 1.82
SERF1A-201ENST00000317633 TSPYL4Q9UJ04 414 aa26.43■■□□□ 1.82
SERF1A-201ENST00000317633 DDNO94850 711 aaPredicted RBP26.42■■□□□ 1.82
SERF1A-201ENST00000317633 RIPK4P57078 832 aa26.42■■□□□ 1.82
SERF1A-201ENST00000317633 TTLL7Q6ZT98 887 aa26.42■■□□□ 1.82
SERF1A-201ENST00000317633 LMOD3Q0VAK6 560 aa26.41■■□□□ 1.82
SERF1A-201ENST00000317633 BABAM1Q9NWV8 329 aa26.41■■□□□ 1.82
SERF1A-201ENST00000317633 SCN4AP35499 1836 aa26.4■■□□□ 1.82
SERF1A-201ENST00000317633 IQCA1LA6NCM1 817 aa26.4■■□□□ 1.82
SERF1A-201ENST00000317633 ZBTB3Q9H5J0 574 aa26.4■■□□□ 1.82
SERF1A-201ENST00000317633 IBTKQ9P2D0 1353 aaPredicted RBP26.4■■□□□ 1.82
SERF1A-201ENST00000317633 CRY2Q49AN0 593 aa26.39■■□□□ 1.82
SERF1A-201ENST00000317633 NUTM1Q86Y26 1132 aa26.39■■□□□ 1.82
SERF1A-201ENST00000317633 GPTP24298 496 aa26.38■■□□□ 1.81
SERF1A-201ENST00000317633 CHADLQ6NUI6 762 aa26.38■■□□□ 1.81
SERF1A-201ENST00000317633 RPGRQ92834 1020 aaKnown RBP26.38■■□□□ 1.81
SERF1A-201ENST00000317633 RIC1Q4ADV7 1423 aa26.38■■□□□ 1.81
SERF1A-201ENST00000317633 CC2D2BQ6DHV5 1058 aa26.37■■□□□ 1.81
SERF1A-201ENST00000317633 GIGYF2Q6Y7W6 1299 aaKnown RBP26.37■■□□□ 1.81
SERF1A-201ENST00000317633 ZNF277Q9NRM2 450 aaPredicted RBP26.37■■□□□ 1.81
SERF1A-201ENST00000317633 ABCC12Q96J65 1359 aa26.36■■□□□ 1.81
SERF1A-201ENST00000317633 TMPOP42166 694 aaKnown RBP26.36■■□□□ 1.81
SERF1A-201ENST00000317633 ZNF34Q8IZ26 560 aa26.36■■□□□ 1.81
SERF1A-201ENST00000317633 L3MBTL3Q96JM7 780 aaPredicted RBP26.36■■□□□ 1.81
SERF1A-201ENST00000317633 UBN2Q6ZU65 1347 aa26.36■■□□□ 1.81
SERF1A-201ENST00000317633 EIF2S2P20042 333 aaKnown RBP26.35■■□□□ 1.81
SERF1A-201ENST00000317633 OLFM4Q6UX06 510 aa26.35■■□□□ 1.81
SERF1A-201ENST00000317633 PPP1R42Q7Z4L9 355 aa26.35■■□□□ 1.81
SERF1A-201ENST00000317633 HOXA10P31260 410 aaPredicted RBP26.34■■□□□ 1.81
SERF1A-201ENST00000317633 IARSP41252 1262 aaKnown RBP26.34■■□□□ 1.81
SERF1A-201ENST00000317633 GRIPAP1Q4V328 841 aa26.34■■□□□ 1.81
SERF1A-201ENST00000317633 PARP10Q53GL7 1025 aa26.34■■□□□ 1.81
SERF1A-201ENST00000317633 SUSD4Q5VX71 490 aa26.34■■□□□ 1.81
SERF1A-201ENST00000317633 SYNE4Q8N205 404 aa26.34■■□□□ 1.81
SERF1A-201ENST00000317633 PSMD1Q99460 953 aa26.34■■□□□ 1.81
SERF1A-201ENST00000317633 MYBBP1AQ9BQG0 1328 aaKnown RBP26.34■■□□□ 1.81
SERF1A-201ENST00000317633 DDX10Q13206 875 aaKnown RBP26.33■■□□□ 1.81
SERF1A-201ENST00000317633 JDP2Q8WYK2 163 aa26.32■■□□□ 1.8
SERF1A-201ENST00000317633 RBM17Q96I25 401 aaKnown RBP26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms