RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 TBC1D2BQ9UPU7 963 aa15.97■□□□□ 0.15
ABCD3-201ENST00000315713 NUP98P52948 1817 aa15.96■□□□□ 0.15
ABCD3-201ENST00000315713 PRR5LQ6MZQ0 368 aa15.96■□□□□ 0.15
ABCD3-201ENST00000315713 ZNF790Q6PG37 636 aa15.96■□□□□ 0.15
ABCD3-201ENST00000315713 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
ABCD3-201ENST00000315713 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
ABCD3-201ENST00000315713 C21orf2O43822 256 aa15.95■□□□□ 0.14
ABCD3-201ENST00000315713 NFE2L2Q16236 605 aa15.95■□□□□ 0.14
ABCD3-201ENST00000315713 MCM10Q7L590 875 aa15.95■□□□□ 0.14
ABCD3-201ENST00000315713 MRS2Q9HD23 443 aa15.95■□□□□ 0.14
ABCD3-201ENST00000315713 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
ABCD3-201ENST00000315713 CEMIPQ8WUJ3 1361 aa15.95■□□□□ 0.14
ABCD3-201ENST00000315713 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
ABCD3-201ENST00000315713 POTECB2RU33 542 aa15.94■□□□□ 0.14
ABCD3-201ENST00000315713 A1BGP04217 495 aa15.94■□□□□ 0.14
ABCD3-201ENST00000315713 CCDC184Q52MB2 194 aa15.94■□□□□ 0.14
ABCD3-201ENST00000315713 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
ABCD3-201ENST00000315713 BRIP1Q9BX63 1249 aa15.94■□□□□ 0.14
ABCD3-201ENST00000315713 KCNQ3O43525 872 aa15.93■□□□□ 0.14
ABCD3-201ENST00000315713 CAMTA2O94983 1202 aa15.93■□□□□ 0.14
ABCD3-201ENST00000315713 PDE6BP35913 854 aa15.93■□□□□ 0.14
ABCD3-201ENST00000315713 IL6STP40189 918 aaPredicted RBP15.93■□□□□ 0.14
ABCD3-201ENST00000315713 DCTN1Q14203 1278 aa15.93■□□□□ 0.14
ABCD3-201ENST00000315713 ERFEQ4G0M1 354 aa15.93■□□□□ 0.14
ABCD3-201ENST00000315713 CNBD1Q8NA66 436 aa15.93■□□□□ 0.14
ABCD3-201ENST00000315713 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
ABCD3-201ENST00000315713 CAPN15O75808 1086 aa15.92■□□□□ 0.14
ABCD3-201ENST00000315713 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
ABCD3-201ENST00000315713 ADAMTSL1Q8N6G6 1762 aa15.91■□□□□ 0.14
ABCD3-201ENST00000315713 BTBD11A6QL63 1104 aa15.91■□□□□ 0.14
ABCD3-201ENST00000315713 NPHP1O15259 732 aa15.91■□□□□ 0.14
ABCD3-201ENST00000315713 HSPA1AP0DMV8 641 aaKnown RBP15.91■□□□□ 0.14
ABCD3-201ENST00000315713 HSPA1BP0DMV9 641 aaKnown RBP15.91■□□□□ 0.14
ABCD3-201ENST00000315713 RIPK4P57078 832 aa15.91■□□□□ 0.14
ABCD3-201ENST00000315713 PRPF40BQ6NWY9 871 aaKnown RBP15.91■□□□□ 0.14
ABCD3-201ENST00000315713 TEX13AQ9BXU3 409 aaPredicted RBP15.91■□□□□ 0.14
ABCD3-201ENST00000315713 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
ABCD3-201ENST00000315713 PDZRN3Q9UPQ7 1066 aa15.91■□□□□ 0.14
ABCD3-201ENST00000315713 LTBP3Q9NS15 1303 aa15.91■□□□□ 0.14
ABCD3-201ENST00000315713 TMPOP42166 694 aaKnown RBP15.9■□□□□ 0.14
ABCD3-201ENST00000315713 ST5P78524 1137 aa15.9■□□□□ 0.14
ABCD3-201ENST00000315713 NEUROD2Q15784 382 aa15.9■□□□□ 0.14
ABCD3-201ENST00000315713 TNS4Q8IZW8 715 aa15.9■□□□□ 0.14
ABCD3-201ENST00000315713 SETDB2Q96T68 719 aa15.9■□□□□ 0.14
ABCD3-201ENST00000315713 RRP7AQ9Y3A4 280 aaKnown RBP15.9■□□□□ 0.14
ABCD3-201ENST00000315713 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
ABCD3-201ENST00000315713 LMOD3Q0VAK6 560 aa15.89■□□□□ 0.13
ABCD3-201ENST00000315713 DPY19L2Q6NUT2 758 aa15.89■□□□□ 0.13
ABCD3-201ENST00000315713 DZIP3Q86Y13 1208 aaKnown RBP15.89■□□□□ 0.13
ABCD3-201ENST00000315713 POTEIP0CG38 1075 aa15.88■□□□□ 0.13
ABCD3-201ENST00000315713 POTEJP0CG39 1038 aa15.88■□□□□ 0.13
ABCD3-201ENST00000315713 SRGNP10124 158 aa15.88■□□□□ 0.13
ABCD3-201ENST00000315713 STYK1Q6J9G0 422 aa15.88■□□□□ 0.13
ABCD3-201ENST00000315713 NPM2Q86SE8 214 aaKnown RBP15.88■□□□□ 0.13
ABCD3-201ENST00000315713 CNKSR1Q969H4 720 aa15.88■□□□□ 0.13
ABCD3-201ENST00000315713 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
ABCD3-201ENST00000315713 DDNO94850 711 aaPredicted RBP15.87■□□□□ 0.13
ABCD3-201ENST00000315713 TAF7Q15545 349 aaPredicted RBP15.87■□□□□ 0.13
ABCD3-201ENST00000315713 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
ABCD3-201ENST00000315713 NBPF5PQ86XG9 351 aaPredicted RBP15.86■□□□□ 0.13
ABCD3-201ENST00000315713 MASTLQ96GX5 879 aa15.86■□□□□ 0.13
ABCD3-201ENST00000315713 USP16Q9Y5T5 823 aa15.86■□□□□ 0.13
ABCD3-201ENST00000315713 TRPM7Q96QT4 1865 aa15.86■□□□□ 0.13
ABCD3-201ENST00000315713 APAF1O14727 1248 aa15.85■□□□□ 0.13
ABCD3-201ENST00000315713 CHADLQ6NUI6 762 aa15.85■□□□□ 0.13
ABCD3-201ENST00000315713 LAMB2P55268 1798 aa15.85■□□□□ 0.13
ABCD3-201ENST00000315713 SOGA3Q5TF21 947 aa15.84■□□□□ 0.13
ABCD3-201ENST00000315713 CREBZFQ9NS37 354 aa15.84■□□□□ 0.13
ABCD3-201ENST00000315713 MIS18AQ9NYP9 233 aa15.84■□□□□ 0.13
ABCD3-201ENST00000315713 MKRN1Q9UHC7 482 aaKnown RBP15.84■□□□□ 0.13
ABCD3-201ENST00000315713 LTBP1Q14766 1721 aa15.84■□□□□ 0.13
ABCD3-201ENST00000315713 ANKRD36CQ5JPF3 1778 aa15.84■□□□□ 0.13
ABCD3-201ENST00000315713 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
ABCD3-201ENST00000315713 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
ABCD3-201ENST00000315713 FAM9BQ8IZU0 186 aa15.83■□□□□ 0.12
ABCD3-201ENST00000315713 ZNF652Q9Y2D9 606 aa15.83■□□□□ 0.12
ABCD3-201ENST00000315713 ZNF541Q9H0D2 1346 aa15.83■□□□□ 0.12
ABCD3-201ENST00000315713 COL4A5P29400 1685 aa15.83■□□□□ 0.12
ABCD3-201ENST00000315713 NBPF26B4DH59 902 aa15.82■□□□□ 0.12
ABCD3-201ENST00000315713 SNRPA1P09661 255 aaKnown RBP15.82■□□□□ 0.12
ABCD3-201ENST00000315713 DIEXFQ68CQ4 756 aaKnown RBP15.82■□□□□ 0.12
ABCD3-201ENST00000315713 NBPF10Q6P3W6 841 aaKnown RBP15.82■□□□□ 0.12
ABCD3-201ENST00000315713 NBPF15Q8N660 670 aa15.82■□□□□ 0.12
ABCD3-201ENST00000315713 C7orf43Q8WVR3 580 aa15.82■□□□□ 0.12
ABCD3-201ENST00000315713 FAM177BA6PVY3 158 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 NPR1P16066 1061 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 CNTNAP1P78357 1384 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 CLEC4GQ6UXB4 293 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 SNED1Q8TER0 1413 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 L3MBTL3Q96JM7 780 aaPredicted RBP15.81■□□□□ 0.12
ABCD3-201ENST00000315713 PASKQ96RG2 1323 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 ZNF277Q9NRM2 450 aaPredicted RBP15.81■□□□□ 0.12
ABCD3-201ENST00000315713 TSPYL4Q9UJ04 414 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 TRIM35Q9UPQ4 493 aa15.81■□□□□ 0.12
ABCD3-201ENST00000315713 NIP7Q9Y221 180 aaKnown RBP eCLIP15.81■□□□□ 0.12
ABCD3-201ENST00000315713 IQCA1LA6NCM1 817 aa15.8■□□□□ 0.12
ABCD3-201ENST00000315713 FKBP4Q02790 459 aaKnown RBP eCLIP15.8■□□□□ 0.12
ABCD3-201ENST00000315713 LDHDQ86WU2 507 aa15.8■□□□□ 0.12
ABCD3-201ENST00000315713 TAF1DQ9H5J8 278 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms