RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 SMTNL1A8MU46 457 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 MTHFSDQ2M296 383 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 COPS6Q7L5N1 327 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 AKAP2Q9Y2D5 859 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 NSD2O96028 1365 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 CUL7Q14999 1698 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 EPB41L2O43491 1005 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 DNM1Q05193 864 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 USP48Q86UV5 1035 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 XAGE3Q8WTP9 111 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 ERCC4Q92889 916 aaPredicted RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 RBM8AQ9Y5S9 174 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 ASXL1Q8IXJ9 1541 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 CCDC66A2RUB6 948 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 UBE2HP62256 183 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 SLC4A8Q2Y0W8 1093 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 ANKRD13DQ6ZTN6 518 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 PLEKHM2Q8IWE5 1019 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 KIF18AQ8NI77 898 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 LRRC59Q96AG4 307 aaKnown RBP8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 DCTPP1Q9H773 170 aa8.25□□□□□ -1.09
GAPVD1-203ENST00000312123 BIVM-ERCC5R4GMW8 1640 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 NUP153P49790 1475 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 ZSCAN22P10073 491 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 RBM5P52756 815 aaKnown RBP eCLIP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 CEP85Q6P2H3 762 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 G2E3Q7L622 706 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 DHX37Q8IY37 1157 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 FAM135AQ9P2D6 1515 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 ADAMTS2O95450 1211 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 PDIA4P13667 645 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 ENOX2Q16206 610 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 CWF19L2Q2TBE0 894 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 ANKRD24Q8TF21 1146 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 DDX19AQ9NUU7 478 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 IQSEC3Q9UPP2 1182 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 POLR3AO14802 1390 aaPredicted RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 UGGT2Q9NYU1 1516 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 TOP1P11387 765 aaKnown RBP8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 DNA2P51530 1060 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 PIP4K2BP78356 416 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 CCDC181Q5TID7 509 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 CNNM3Q8NE01 707 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 DACT1Q9NYF0 836 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 PIK3R4Q99570 1358 aa8.24□□□□□ -1.09
GAPVD1-203ENST00000312123 SPDYE4A6NLX3 237 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 CDR1P51861 262 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 ATP8B2P98198 1209 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 LRSAM1Q6UWE0 723 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 LMBR1LQ6UX01 489 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 LEKR1Q6ZMV7 388 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 TMC6Q7Z403 805 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 CCDC102AQ96A19 550 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 ZSWIM4Q9H7M6 989 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 PPP1R1BQ9UD71 204 aaPredicted RBP8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 SLC12A7Q9Y666 1083 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 KDM5BQ9UGL1 1544 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 GOLGA8AA7E2F4 631 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 MAP3K12Q12852 859 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 CHST3Q7LGC8 479 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 TRERF1Q96PN7 1200 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 TRAPPC8Q9Y2L5 1435 aa8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 PHAXQ9H814 394 aaKnown RBP8.23□□□□□ -1.09
GAPVD1-203ENST00000312123 HMGB1P09429 215 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 KIF4BQ2VIQ3 1234 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 WASF1Q92558 559 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 SNX21Q969T3 373 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 ZBTB9Q96C00 473 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 MKNK2Q9HBH9 465 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 ZBTB7BO15156 539 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 CCDC186Q7Z3E2 898 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 KIAA1328Q86T90 577 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 IFNL2Q8IZJ0 200 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 GRM8O00222 908 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 POLR3GO15318 223 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 CLCN1P35523 988 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 IARSP41252 1262 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 CTCFLQ8NI51 663 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 PDCL3Q9H2J4 239 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 CWC15Q9P013 229 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 KLF18A0A0U1RQI7 1052 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 TMEM67Q5HYA8 995 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 TAF3Q5VWG9 929 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 TMCO3Q6UWJ1 677 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 EYA1Q99502 592 aa8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 BMP2KQ9NSY1 1161 aaPredicted RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 SEPT11Q9NVA2 429 aaKnown RBP8.22□□□□□ -1.09
GAPVD1-203ENST00000312123 ERLIN1O75477 346 aa8.21□□□□□ -1.09
GAPVD1-203ENST00000312123 AK2P54819 239 aa8.21□□□□□ -1.09
GAPVD1-203ENST00000312123 RAB3GAP1Q15042 981 aa8.21□□□□□ -1.09
GAPVD1-203ENST00000312123 FAM173BQ6P4H8 233 aa8.21□□□□□ -1.09
GAPVD1-203ENST00000312123 CABLES1Q8TDN4 633 aa8.21□□□□□ -1.09
GAPVD1-203ENST00000312123 CWC25Q9NXE8 425 aaPredicted RBP8.21□□□□□ -1.09
GAPVD1-203ENST00000312123 ANKRD18BA2A2Z9 1011 aa8.21□□□□□ -1.1
GAPVD1-203ENST00000312123 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.1
GAPVD1-203ENST00000312123 IQCA1Q86XH1 822 aa8.21□□□□□ -1.1
GAPVD1-203ENST00000312123 DNAJC25Q9H1X3 360 aa8.21□□□□□ -1.1
GAPVD1-203ENST00000312123 CCDC196A0A1B0GTZ2 297 aa8.21□□□□□ -1.1
GAPVD1-203ENST00000312123 SNRPA1P09661 255 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms