RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 OGFRQ9NZT2 677 aa17.46■□□□□ 0.38
COL6A2-202ENST00000310645 PHAXQ9H814 394 aaKnown RBP17.45■□□□□ 0.38
COL6A2-202ENST00000310645 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
COL6A2-202ENST00000310645 FEZ1Q99689 392 aa17.44■□□□□ 0.38
COL6A2-202ENST00000310645 NPHP1O15259 732 aa17.44■□□□□ 0.38
COL6A2-202ENST00000310645 STK3Q13188 491 aa17.44■□□□□ 0.38
COL6A2-202ENST00000310645 DNAJC25Q9H1X3 360 aa17.44■□□□□ 0.38
COL6A2-202ENST00000310645 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
COL6A2-202ENST00000310645 SMTNL1A8MU46 457 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 BICD2Q8TD16 824 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 IL17RAQ96F46 866 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 CLIP2Q9UDT6 1046 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 SSH3Q8TE77 659 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 COL9A3Q14050 684 aaPredicted RBP17.43■□□□□ 0.38
COL6A2-202ENST00000310645 CACTINQ8WUQ7 758 aaKnown RBP17.43■□□□□ 0.38
COL6A2-202ENST00000310645 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 SPATA32Q96LK8 384 aa17.43■□□□□ 0.38
COL6A2-202ENST00000310645 ZNF165P49910 485 aa17.42■□□□□ 0.38
COL6A2-202ENST00000310645 ZNF75DP51815 510 aa17.42■□□□□ 0.38
COL6A2-202ENST00000310645 ST3GAL1Q11201 340 aa17.42■□□□□ 0.38
COL6A2-202ENST00000310645 MLECQ14165 292 aa17.42■□□□□ 0.38
COL6A2-202ENST00000310645 TPCN1Q9ULQ1 816 aa17.42■□□□□ 0.38
COL6A2-202ENST00000310645 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
COL6A2-202ENST00000310645 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-202ENST00000310645 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-202ENST00000310645 AOX1Q06278 1338 aa17.41■□□□□ 0.38
COL6A2-202ENST00000310645 TTC21BQ7Z4L5 1316 aa17.41■□□□□ 0.38
COL6A2-202ENST00000310645 ARID5BQ14865 1188 aa17.41■□□□□ 0.38
COL6A2-202ENST00000310645 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
COL6A2-202ENST00000310645 ZKSCAN1P17029 563 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-202ENST00000310645 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
COL6A2-202ENST00000310645 SH2B1Q9NRF2 756 aaPredicted RBP17.41■□□□□ 0.38
COL6A2-202ENST00000310645 CCDC144BQ3MJ40 725 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 CCDC144CPQ8IYA2 1237 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 RUFY2Q8WXA3 655 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 TRMT1Q9NXH9 659 aaKnown RBP17.4■□□□□ 0.38
COL6A2-202ENST00000310645 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 BBXQ8WY36 941 aaPredicted RBP17.4■□□□□ 0.38
COL6A2-202ENST00000310645 ZBTB22O15209 634 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 AMPHP49418 695 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 FBXW7Q969H0 707 aa17.4■□□□□ 0.38
COL6A2-202ENST00000310645 TMEM131LA2VDJ0 1609 aa17.39■□□□□ 0.37
COL6A2-202ENST00000310645 EPB41L2O43491 1005 aaKnown RBP17.39■□□□□ 0.37
COL6A2-202ENST00000310645 LTV1Q96GA3 475 aaPredicted RBP17.39■□□□□ 0.37
COL6A2-202ENST00000310645 NR1I2O75469 434 aa17.39■□□□□ 0.37
COL6A2-202ENST00000310645 ANXA1P04083 346 aa17.39■□□□□ 0.37
COL6A2-202ENST00000310645 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
COL6A2-202ENST00000310645 ACEP12821 1306 aa17.38■□□□□ 0.37
COL6A2-202ENST00000310645 USP27XA6NNY8 438 aa17.38■□□□□ 0.37
COL6A2-202ENST00000310645 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
COL6A2-202ENST00000310645 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
COL6A2-202ENST00000310645 A0A087WWV3 80 aa17.38■□□□□ 0.37
COL6A2-202ENST00000310645 FOSBP53539 338 aa17.38■□□□□ 0.37
COL6A2-202ENST00000310645 TAF7Q15545 349 aaPredicted RBP17.38■□□□□ 0.37
COL6A2-202ENST00000310645 DDX11Q96FC9 970 aa17.38■□□□□ 0.37
COL6A2-202ENST00000310645 PAXBP1Q9Y5B6 917 aa17.38■□□□□ 0.37
COL6A2-202ENST00000310645 RBM8AQ9Y5S9 174 aaKnown RBP17.38■□□□□ 0.37
COL6A2-202ENST00000310645 GLRX3O76003 335 aaKnown RBP17.37■□□□□ 0.37
COL6A2-202ENST00000310645 EYA1Q99502 592 aa17.37■□□□□ 0.37
COL6A2-202ENST00000310645 DDX41Q9UJV9 622 aaKnown RBP17.37■□□□□ 0.37
COL6A2-202ENST00000310645 METP08581 1390 aa17.37■□□□□ 0.37
COL6A2-202ENST00000310645 ERICH4A6NGS2 130 aa17.37■□□□□ 0.37
COL6A2-202ENST00000310645 GOLGA6L19H0YKK7 550 aa17.37■□□□□ 0.37
COL6A2-202ENST00000310645 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
COL6A2-202ENST00000310645 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
COL6A2-202ENST00000310645 FAM227BQ96M60 508 aa17.37■□□□□ 0.37
COL6A2-202ENST00000310645 PA2G4Q9UQ80 394 aaKnown RBP17.36■□□□□ 0.37
COL6A2-202ENST00000310645 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
COL6A2-202ENST00000310645 CREB3L3Q68CJ9 461 aa17.36■□□□□ 0.37
COL6A2-202ENST00000310645 PLA2G4DQ86XP0 818 aa17.36■□□□□ 0.37
COL6A2-202ENST00000310645 KIF18AQ8NI77 898 aa17.36■□□□□ 0.37
COL6A2-202ENST00000310645 LEO1Q8WVC0 666 aaPredicted RBP17.36■□□□□ 0.37
COL6A2-202ENST00000310645 SCAND2PQ9GZW5 306 aaPredicted RBP17.36■□□□□ 0.37
COL6A2-202ENST00000310645 PDCP20941 246 aa17.35■□□□□ 0.37
COL6A2-202ENST00000310645 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
COL6A2-202ENST00000310645 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
COL6A2-202ENST00000310645 PTPN14Q15678 1187 aa17.35■□□□□ 0.37
COL6A2-202ENST00000310645 CLSTN2Q9H4D0 955 aa17.35■□□□□ 0.37
COL6A2-202ENST00000310645 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
COL6A2-202ENST00000310645 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 POLA2Q14181 598 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
COL6A2-202ENST00000310645 PI4KAP2A4QPH2 592 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 SKILP12757 684 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 BLOC1S2Q6QNY1 142 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 PI4KAP1Q8N8J0 262 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 TAF6LQ9Y6J9 622 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 KMT5BQ4FZB7 885 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
COL6A2-202ENST00000310645 TDRD7Q8NHU6 1098 aaKnown RBP17.34■□□□□ 0.37
COL6A2-202ENST00000310645 BECN2A8MW95 431 aa17.33■□□□□ 0.37
COL6A2-202ENST00000310645 ELF2Q15723 593 aa17.33■□□□□ 0.37
COL6A2-202ENST00000310645 PGBD1Q96JS3 809 aa17.33■□□□□ 0.37
COL6A2-202ENST00000310645 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms