RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 MSNP26038 577 aaKnown RBP25.15■■□□□ 1.62
RELA-201ENST00000308639 COL9A3Q14050 684 aaPredicted RBP25.15■■□□□ 1.62
RELA-201ENST00000308639 KIAA1211Q6ZU35 1233 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 PDLIM2Q96JY6 352 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.15■■□□□ 1.62
RELA-201ENST00000308639 CNPY2Q9Y2B0 182 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 AXIN2Q9Y2T1 843 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 HOXB7P09629 217 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 C1orf141Q5JVX7 400 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 DIAPH3Q9NSV4 1193 aa25.15■■□□□ 1.62
RELA-201ENST00000308639 CLASRPQ8N2M8 674 aaKnown RBP25.14■■□□□ 1.61
RELA-201ENST00000308639 PRPF40BQ6NWY9 871 aaKnown RBP25.13■■□□□ 1.61
RELA-201ENST00000308639 ANKRD24Q8TF21 1146 aa25.13■■□□□ 1.61
RELA-201ENST00000308639 WDR33Q9C0J8 1336 aaKnown RBP25.13■■□□□ 1.61
RELA-201ENST00000308639 GLRX3O76003 335 aaKnown RBP25.12■■□□□ 1.61
RELA-201ENST00000308639 AACSQ86V21 672 aa25.12■■□□□ 1.61
RELA-201ENST00000308639 KCNH5Q8NCM2 988 aa25.12■■□□□ 1.61
RELA-201ENST00000308639 SUCLG2Q96I99 432 aa25.12■■□□□ 1.61
RELA-201ENST00000308639 MPNDQ8N594 471 aa25.12■■□□□ 1.61
RELA-201ENST00000308639 KLHDC4Q8TBB5 520 aa25.12■■□□□ 1.61
RELA-201ENST00000308639 SIL1Q9H173 461 aa25.12■■□□□ 1.61
RELA-201ENST00000308639 SLC39A6Q13433 755 aa25.11■■□□□ 1.61
RELA-201ENST00000308639 KAZALD1Q96I82 304 aa25.11■■□□□ 1.61
RELA-201ENST00000308639 CCDC8Q9H0W5 538 aaPredicted RBP25.11■■□□□ 1.61
RELA-201ENST00000308639 KSR2Q6VAB6 950 aa25.11■■□□□ 1.61
RELA-201ENST00000308639 JAKMIP1Q96N16 626 aaKnown RBP25.11■■□□□ 1.61
RELA-201ENST00000308639 ECHDC1Q9NTX5 307 aa25.11■■□□□ 1.61
RELA-201ENST00000308639 TLR7Q9NYK1 1049 aaKnown RBP25.11■■□□□ 1.61
RELA-201ENST00000308639 IFIT2P09913 472 aaKnown RBP25.1■■□□□ 1.61
RELA-201ENST00000308639 SYT1P21579 422 aa25.1■■□□□ 1.61
RELA-201ENST00000308639 HSP90AB4PQ58FF6 505 aa25.1■■□□□ 1.61
RELA-201ENST00000308639 ARHGEF25Q86VW2 580 aa25.1■■□□□ 1.61
RELA-201ENST00000308639 ANKLE2Q86XL3 938 aa25.1■■□□□ 1.61
RELA-201ENST00000308639 CCDC83Q8IWF9 413 aa25.1■■□□□ 1.61
RELA-201ENST00000308639 LIMCH1Q9UPQ0 1083 aa25.1■■□□□ 1.61
RELA-201ENST00000308639 LMO7Q8WWI1 1683 aa25.1■■□□□ 1.61
RELA-201ENST00000308639 FAM227BQ96M60 508 aa25.09■■□□□ 1.61
RELA-201ENST00000308639 BICC1Q9H694 974 aaKnown RBP25.09■■□□□ 1.61
RELA-201ENST00000308639 JARID2Q92833 1246 aaPredicted RBP25.09■■□□□ 1.61
RELA-201ENST00000308639 TTC41PQ6P2S7 1318 aa25.09■■□□□ 1.61
RELA-201ENST00000308639 CHD2O14647 1828 aaKnown RBP25.09■■□□□ 1.61
RELA-201ENST00000308639 MTX1Q13505 466 aa25.09■■□□□ 1.61
RELA-201ENST00000308639 TSPY26PQ9H489 355 aa25.09■■□□□ 1.61
RELA-201ENST00000308639 SASH1O94885 1247 aa25.08■■□□□ 1.61
RELA-201ENST00000308639 PIP4K2AP48426 406 aaPredicted RBP25.08■■□□□ 1.61
RELA-201ENST00000308639 USP42Q9H9J4 1324 aaKnown RBP25.08■■□□□ 1.61
RELA-201ENST00000308639 EAF2Q96CJ1 260 aaPredicted RBP25.08■■□□□ 1.6
RELA-201ENST00000308639 HYPKQ9NX55 129 aa25.08■■□□□ 1.6
RELA-201ENST00000308639 FIBPO43427 364 aa25.07■■□□□ 1.6
RELA-201ENST00000308639 STX6O43752 255 aa25.07■■□□□ 1.6
RELA-201ENST00000308639 ZSCAN22P10073 491 aaPredicted RBP25.07■■□□□ 1.6
RELA-201ENST00000308639 MYL6BP14649 208 aa25.07■■□□□ 1.6
RELA-201ENST00000308639 AMOTQ4VCS5 1084 aa25.07■■□□□ 1.6
RELA-201ENST00000308639 NECAB1Q8N987 351 aa25.07■■□□□ 1.6
RELA-201ENST00000308639 NOL7Q9UMY1 257 aaKnown RBP25.07■■□□□ 1.6
RELA-201ENST00000308639 SMC3Q9UQE7 1217 aa25.07■■□□□ 1.6
RELA-201ENST00000308639 TCEANC2Q96MN5 208 aa25.06■■□□□ 1.6
RELA-201ENST00000308639 EPB41L2O43491 1005 aaKnown RBP25.06■■□□□ 1.6
RELA-201ENST00000308639 ZC3H6P61129 1189 aaKnown RBP25.06■■□□□ 1.6
RELA-201ENST00000308639 GRM8O00222 908 aa25.05■■□□□ 1.6
RELA-201ENST00000308639 ALDH1L1O75891 902 aa25.05■■□□□ 1.6
RELA-201ENST00000308639 ST3GAL1Q11201 340 aa25.05■■□□□ 1.6
RELA-201ENST00000308639 PDRG1Q9NUG6 133 aa25.05■■□□□ 1.6
RELA-201ENST00000308639 CRYBG1Q9Y4K1 1723 aa25.04■■□□□ 1.6
RELA-201ENST00000308639 GJB2P29033 226 aa25.04■■□□□ 1.6
RELA-201ENST00000308639 BOLA2Q9H3K6 86 aa25.04■■□□□ 1.6
RELA-201ENST00000308639 TAF6LQ9Y6J9 622 aa25.04■■□□□ 1.6
RELA-201ENST00000308639 NMIQ13287 307 aaPredicted RBP25.04■■□□□ 1.6
RELA-201ENST00000308639 ADGRL3Q9HAR2 1447 aa25.04■■□□□ 1.6
RELA-201ENST00000308639 IGKV5-2P06315 115 aa25.03■■□□□ 1.6
RELA-201ENST00000308639 PDIA6Q15084 440 aa25.03■■□□□ 1.6
RELA-201ENST00000308639 OFD1O75665 1012 aa25.03■■□□□ 1.6
RELA-201ENST00000308639 EDC3Q96F86 508 aaKnown RBP25.03■■□□□ 1.6
RELA-201ENST00000308639 F13A1P00488 732 aa25.02■■□□□ 1.6
RELA-201ENST00000308639 RBM8AQ9Y5S9 174 aaKnown RBP25.02■■□□□ 1.6
RELA-201ENST00000308639 HEG1Q9ULI3 1381 aa25.02■■□□□ 1.6
RELA-201ENST00000308639 LINS1Q8NG48 757 aa25.02■■□□□ 1.6
RELA-201ENST00000308639 RUFY2Q8WXA3 655 aa25.02■■□□□ 1.6
RELA-201ENST00000308639 SYAP1Q96A49 352 aaPredicted RBP25.02■■□□□ 1.6
RELA-201ENST00000308639 KCNJ4P48050 445 aa25.01■■□□□ 1.59
RELA-201ENST00000308639 ME3Q16798 604 aa25.01■■□□□ 1.59
RELA-201ENST00000308639 EPHA10Q5JZY3 1008 aa25.01■■□□□ 1.59
RELA-201ENST00000308639 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.01■■□□□ 1.59
RELA-201ENST00000308639 CCDC171Q6TFL3 1326 aa25.01■■□□□ 1.59
RELA-201ENST00000308639 A0A0D9SFI3 127 aa25.01■■□□□ 1.59
RELA-201ENST00000308639 DNM1Q05193 864 aaKnown RBP25.01■■□□□ 1.59
RELA-201ENST00000308639 NDUFB9Q9Y6M9 179 aa25.01■■□□□ 1.59
RELA-201ENST00000308639 G3BP1Q13283 466 aaKnown RBP eCLIP25■■□□□ 1.59
RELA-201ENST00000308639 RIC3Q7Z5B4 369 aa25■■□□□ 1.59
RELA-201ENST00000308639 EVI5LQ96CN4 794 aa25■■□□□ 1.59
RELA-201ENST00000308639 GPATCH3Q96I76 525 aa25■■□□□ 1.59
RELA-201ENST00000308639 PODXL2Q9NZ53 605 aa25■■□□□ 1.59
RELA-201ENST00000308639 ZKSCAN5Q9Y2L8 839 aa25■■□□□ 1.59
RELA-201ENST00000308639 R3HCC1Q9Y3T6 440 aaKnown RBP25■■□□□ 1.59
RELA-201ENST00000308639 NECTIN1Q15223 517 aa25■■□□□ 1.59
RELA-201ENST00000308639 HS1BP3Q53T59 392 aa25■■□□□ 1.59
RELA-201ENST00000308639 VPS37CA5D8V6 355 aaPredicted RBP24.99■■□□□ 1.59
RELA-201ENST00000308639 CREB3L3Q68CJ9 461 aa24.99■■□□□ 1.59
RELA-201ENST00000308639 ZSWIM6Q9HCJ5 1215 aa24.99■■□□□ 1.59
RELA-201ENST00000308639 CYP46A1Q9Y6A2 500 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms