RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 RRP9O43818 475 aaKnown RBP18.25■□□□□ 0.51
CSDC2-201ENST00000306149 MSNP26038 577 aaKnown RBP18.25■□□□□ 0.51
CSDC2-201ENST00000306149 HSP90AB4PQ58FF6 505 aa18.25■□□□□ 0.51
CSDC2-201ENST00000306149 GLRX3O76003 335 aaKnown RBP18.24■□□□□ 0.51
CSDC2-201ENST00000306149 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
CSDC2-201ENST00000306149 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
CSDC2-201ENST00000306149 ARHGEF25Q86VW2 580 aa18.24■□□□□ 0.51
CSDC2-201ENST00000306149 TTC14Q96N46 770 aa18.24■□□□□ 0.51
CSDC2-201ENST00000306149 MED1Q15648 1581 aaPredicted RBP18.24■□□□□ 0.51
CSDC2-201ENST00000306149 LARGE1O95461 756 aa18.24■□□□□ 0.51
CSDC2-201ENST00000306149 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
CSDC2-201ENST00000306149 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
CSDC2-201ENST00000306149 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
CSDC2-201ENST00000306149 AMOTQ4VCS5 1084 aa18.23■□□□□ 0.51
CSDC2-201ENST00000306149 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
CSDC2-201ENST00000306149 AACSQ86V21 672 aa18.23■□□□□ 0.51
CSDC2-201ENST00000306149 SIL1Q9H173 461 aa18.23■□□□□ 0.51
CSDC2-201ENST00000306149 KDM3BQ7LBC6 1761 aa18.22■□□□□ 0.51
CSDC2-201ENST00000306149 WDR33Q9C0J8 1336 aaKnown RBP18.22■□□□□ 0.51
CSDC2-201ENST00000306149 OFD1O75665 1012 aa18.22■□□□□ 0.51
CSDC2-201ENST00000306149 CCDC8Q9H0W5 538 aaPredicted RBP18.22■□□□□ 0.51
CSDC2-201ENST00000306149 ECHDC1Q9NTX5 307 aa18.22■□□□□ 0.51
CSDC2-201ENST00000306149 CNPY2Q9Y2B0 182 aa18.22■□□□□ 0.51
CSDC2-201ENST00000306149 RPAP1Q9BWH6 1393 aaPredicted RBP18.22■□□□□ 0.51
CSDC2-201ENST00000306149 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
CSDC2-201ENST00000306149 KLHDC4Q8TBB5 520 aa18.22■□□□□ 0.51
CSDC2-201ENST00000306149 SUCLG2Q96I99 432 aa18.22■□□□□ 0.51
CSDC2-201ENST00000306149 KAZALD1Q96I82 304 aa18.21■□□□□ 0.51
CSDC2-201ENST00000306149 NOL7Q9UMY1 257 aaKnown RBP18.21■□□□□ 0.51
CSDC2-201ENST00000306149 LIMCH1Q9UPQ0 1083 aa18.21■□□□□ 0.51
CSDC2-201ENST00000306149 TTC41PQ6P2S7 1318 aa18.21■□□□□ 0.51
CSDC2-201ENST00000306149 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
CSDC2-201ENST00000306149 MTX1Q13505 466 aa18.21■□□□□ 0.51
CSDC2-201ENST00000306149 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
CSDC2-201ENST00000306149 JAKMIP1Q96N16 626 aaKnown RBP18.21■□□□□ 0.51
CSDC2-201ENST00000306149 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
CSDC2-201ENST00000306149 MYL6BP14649 208 aa18.2■□□□□ 0.5
CSDC2-201ENST00000306149 COL9A3Q14050 684 aaPredicted RBP18.2■□□□□ 0.5
CSDC2-201ENST00000306149 CHMP4AQ9BY43 222 aa18.2■□□□□ 0.5
CSDC2-201ENST00000306149 SYT1P21579 422 aa18.2■□□□□ 0.5
CSDC2-201ENST00000306149 CCDC83Q8IWF9 413 aa18.2■□□□□ 0.5
CSDC2-201ENST00000306149 JARID2Q92833 1246 aaPredicted RBP18.2■□□□□ 0.5
CSDC2-201ENST00000306149 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
CSDC2-201ENST00000306149 ALDH1L1O75891 902 aa18.19■□□□□ 0.5
CSDC2-201ENST00000306149 SASH1O94885 1247 aa18.19■□□□□ 0.5
CSDC2-201ENST00000306149 HSP90AA2PQ14568 343 aaPredicted RBP18.19■□□□□ 0.5
CSDC2-201ENST00000306149 EAF2Q96CJ1 260 aaPredicted RBP18.19■□□□□ 0.5
CSDC2-201ENST00000306149 FAM227BQ96M60 508 aa18.19■□□□□ 0.5
CSDC2-201ENST00000306149 CHD2O14647 1828 aaKnown RBP18.19■□□□□ 0.5
CSDC2-201ENST00000306149 GRM8O00222 908 aa18.19■□□□□ 0.5
CSDC2-201ENST00000306149 PIP4K2AP48426 406 aaPredicted RBP18.19■□□□□ 0.5
CSDC2-201ENST00000306149 USP42Q9H9J4 1324 aaKnown RBP18.19■□□□□ 0.5
CSDC2-201ENST00000306149 ZNF500O60304 480 aaPredicted RBP18.19■□□□□ 0.5
CSDC2-201ENST00000306149 HYPKQ9NX55 129 aa18.19■□□□□ 0.5
CSDC2-201ENST00000306149 SMC3Q9UQE7 1217 aa18.19■□□□□ 0.5
CSDC2-201ENST00000306149 STX6O43752 255 aa18.18■□□□□ 0.5
CSDC2-201ENST00000306149 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
CSDC2-201ENST00000306149 TERF1P54274 439 aa18.18■□□□□ 0.5
CSDC2-201ENST00000306149 TSPY26PQ9H489 355 aa18.18■□□□□ 0.5
CSDC2-201ENST00000306149 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.18■□□□□ 0.5
CSDC2-201ENST00000306149 ADGRL3Q9HAR2 1447 aa18.18■□□□□ 0.5
CSDC2-201ENST00000306149 MPNDQ8N594 471 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 RUFY2Q8WXA3 655 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 BOLA2Q9H3K6 86 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 PDRG1Q9NUG6 133 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 LMO7Q8WWI1 1683 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 FIBPO43427 364 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
CSDC2-201ENST00000306149 PDIA6Q15084 440 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 SYAP1Q96A49 352 aaPredicted RBP18.17■□□□□ 0.5
CSDC2-201ENST00000306149 GPATCH3Q96I76 525 aa18.17■□□□□ 0.5
CSDC2-201ENST00000306149 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
CSDC2-201ENST00000306149 KCNJ4P48050 445 aa18.16■□□□□ 0.5
CSDC2-201ENST00000306149 MCM5P33992 734 aa18.16■□□□□ 0.5
CSDC2-201ENST00000306149 NMIQ13287 307 aaPredicted RBP18.16■□□□□ 0.5
CSDC2-201ENST00000306149 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
CSDC2-201ENST00000306149 TCEANC2Q96MN5 208 aa18.16■□□□□ 0.5
CSDC2-201ENST00000306149 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.16■□□□□ 0.5
CSDC2-201ENST00000306149 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
CSDC2-201ENST00000306149 GJB2P29033 226 aa18.15■□□□□ 0.5
CSDC2-201ENST00000306149 ERC1Q8IUD2 1116 aa18.15■□□□□ 0.5
CSDC2-201ENST00000306149 EVI5LQ96CN4 794 aa18.15■□□□□ 0.5
CSDC2-201ENST00000306149 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
CSDC2-201ENST00000306149 ZKSCAN5Q9Y2L8 839 aa18.15■□□□□ 0.5
CSDC2-201ENST00000306149 NFATC2IPQ8NCF5 419 aa18.15■□□□□ 0.5
CSDC2-201ENST00000306149 RBM8AQ9Y5S9 174 aaKnown RBP18.15■□□□□ 0.5
CSDC2-201ENST00000306149 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.5
CSDC2-201ENST00000306149 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.5
CSDC2-201ENST00000306149 CYP46A1Q9Y6A2 500 aa18.14■□□□□ 0.5
CSDC2-201ENST00000306149 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
CSDC2-201ENST00000306149 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
CSDC2-201ENST00000306149 DDX17Q92841 729 aaKnown RBP18.14■□□□□ 0.49
CSDC2-201ENST00000306149 CCDC39Q9UFE4 941 aa18.14■□□□□ 0.49
CSDC2-201ENST00000306149 TAF6LQ9Y6J9 622 aa18.14■□□□□ 0.49
CSDC2-201ENST00000306149 DDX58O95786 925 aaKnown RBP18.13■□□□□ 0.49
CSDC2-201ENST00000306149 F13A1P00488 732 aa18.13■□□□□ 0.49
CSDC2-201ENST00000306149 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms