RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
CTTN-201ENST00000301843 GJB2P29033 226 aa16.29■□□□□ 0.2
CTTN-201ENST00000301843 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
CTTN-201ENST00000301843 SIL1Q9H173 461 aa16.29■□□□□ 0.2
CTTN-201ENST00000301843 DIAPH3Q9NSV4 1193 aa16.29■□□□□ 0.2
CTTN-201ENST00000301843 RAD50Q92878 1312 aa16.28■□□□□ 0.2
CTTN-201ENST00000301843 FER1L4A9Z1Z3 1794 aa16.28■□□□□ 0.2
CTTN-201ENST00000301843 AP5Z1O43299 807 aa16.28■□□□□ 0.2
CTTN-201ENST00000301843 KIAA2012Q0VF49 1180 aa16.28■□□□□ 0.2
CTTN-201ENST00000301843 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
CTTN-201ENST00000301843 CCDC9Q9Y3X0 531 aaKnown RBP16.28■□□□□ 0.2
CTTN-201ENST00000301843 TAF6LQ9Y6J9 622 aa16.28■□□□□ 0.2
CTTN-201ENST00000301843 KCNJ4P48050 445 aa16.27■□□□□ 0.2
CTTN-201ENST00000301843 AIMP1Q12904 312 aaKnown RBP16.27■□□□□ 0.2
CTTN-201ENST00000301843 PROSER3Q2NL68 480 aa16.27■□□□□ 0.2
CTTN-201ENST00000301843 KLHDC4Q8TBB5 520 aa16.27■□□□□ 0.2
CTTN-201ENST00000301843 MARF1Q9Y4F3 1742 aaKnown RBP16.27■□□□□ 0.2
CTTN-201ENST00000301843 STK3Q13188 491 aa16.27■□□□□ 0.2
CTTN-201ENST00000301843 CNTROBQ8N137 903 aa16.27■□□□□ 0.2
CTTN-201ENST00000301843 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
CTTN-201ENST00000301843 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.19
CTTN-201ENST00000301843 PPFIA3O75145 1194 aa16.27■□□□□ 0.19
CTTN-201ENST00000301843 FAM227BQ96M60 508 aa16.27■□□□□ 0.19
CTTN-201ENST00000301843 TTC14Q96N46 770 aa16.27■□□□□ 0.19
CTTN-201ENST00000301843 CCDC8Q9H0W5 538 aaPredicted RBP16.27■□□□□ 0.19
CTTN-201ENST00000301843 LIMCH1Q9UPQ0 1083 aa16.27■□□□□ 0.19
CTTN-201ENST00000301843 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.19
CTTN-201ENST00000301843 F13A1P00488 732 aa16.26■□□□□ 0.19
CTTN-201ENST00000301843 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
CTTN-201ENST00000301843 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
CTTN-201ENST00000301843 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 DNAAF4Q8WXU2 420 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 CHGBP05060 677 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
CTTN-201ENST00000301843 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 KCNA6P17658 529 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 FOSBP53539 338 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 PDRG1Q9NUG6 133 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 TFIP11Q9UBB9 837 aaKnown RBP16.25■□□□□ 0.19
CTTN-201ENST00000301843 USP54Q70EL1 1684 aa16.25■□□□□ 0.19
CTTN-201ENST00000301843 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
CTTN-201ENST00000301843 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
CTTN-201ENST00000301843 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
CTTN-201ENST00000301843 ST3GAL1Q11201 340 aa16.24■□□□□ 0.19
CTTN-201ENST00000301843 ME3Q16798 604 aa16.24■□□□□ 0.19
CTTN-201ENST00000301843 CKAP2LQ8IYA6 745 aa16.24■□□□□ 0.19
CTTN-201ENST00000301843 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
CTTN-201ENST00000301843 TLR7Q9NYK1 1049 aaKnown RBP16.24■□□□□ 0.19
CTTN-201ENST00000301843 PHF14O94880 888 aa16.23■□□□□ 0.19
CTTN-201ENST00000301843 BEND3Q5T5X7 828 aa16.23■□□□□ 0.19
CTTN-201ENST00000301843 AACSQ86V21 672 aa16.23■□□□□ 0.19
CTTN-201ENST00000301843 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
CTTN-201ENST00000301843 NOLC1Q14978 699 aaKnown RBP eCLIP16.23■□□□□ 0.193e-7■□□□□ 8.1
CTTN-201ENST00000301843 CSPP1Q1MSJ5 1256 aa16.23■□□□□ 0.19
CTTN-201ENST00000301843 POLA2Q14181 598 aa16.23■□□□□ 0.19
CTTN-201ENST00000301843 BOLA2Q9H3K6 86 aa16.22■□□□□ 0.19
CTTN-201ENST00000301843 MTMR6Q9Y217 621 aa16.22■□□□□ 0.19
CTTN-201ENST00000301843 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
CTTN-201ENST00000301843 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
CTTN-201ENST00000301843 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
CTTN-201ENST00000301843 PYCARDQ9ULZ3 195 aa16.22■□□□□ 0.19
CTTN-201ENST00000301843 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
CTTN-201ENST00000301843 UBE2HP62256 183 aa16.21■□□□□ 0.19
CTTN-201ENST00000301843 CDC37L1Q7L3B6 337 aa16.21■□□□□ 0.19
CTTN-201ENST00000301843 TEFQ10587 303 aa16.21■□□□□ 0.19
CTTN-201ENST00000301843 CLASRPQ8N2M8 674 aaKnown RBP16.21■□□□□ 0.19
CTTN-201ENST00000301843 TPCN1Q9ULQ1 816 aa16.21■□□□□ 0.19
CTTN-201ENST00000301843 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.21■□□□□ 0.19
CTTN-201ENST00000301843 BTBD11A6QL63 1104 aa16.21■□□□□ 0.19
CTTN-201ENST00000301843 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
CTTN-201ENST00000301843 LIG1P18858 919 aa16.2■□□□□ 0.18
CTTN-201ENST00000301843 TUBGCP6Q96RT7 1819 aa16.2■□□□□ 0.18
CTTN-201ENST00000301843 RBM8AQ9Y5S9 174 aaKnown RBP16.2■□□□□ 0.18
CTTN-201ENST00000301843 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
CTTN-201ENST00000301843 LUZP1Q86V48 1076 aa16.2■□□□□ 0.18
CTTN-201ENST00000301843 DDX11Q96FC9 970 aa16.2■□□□□ 0.18
CTTN-201ENST00000301843 NMIQ13287 307 aaPredicted RBP16.19■□□□□ 0.18
CTTN-201ENST00000301843 LARP1BQ659C4 914 aaKnown RBP16.19■□□□□ 0.18
CTTN-201ENST00000301843 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
CTTN-201ENST00000301843 KDM4AO75164 1064 aa16.19■□□□□ 0.18
CTTN-201ENST00000301843 MCM5P33992 734 aa16.19■□□□□ 0.18
CTTN-201ENST00000301843 CEBPZQ03701 1054 aaKnown RBP16.19■□□□□ 0.18
CTTN-201ENST00000301843 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
CTTN-201ENST00000301843 A0A087WWV3 80 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 GLRX3O76003 335 aaKnown RBP16.18■□□□□ 0.18
CTTN-201ENST00000301843 ADCY9O60503 1353 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 A0A0D9SFI3 127 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 LRRC2Q9BYS8 371 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 KCNF1Q9H3M0 494 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 BABAM1Q9NWV8 329 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 DYNC1I1O14576 645 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 EAF2Q96CJ1 260 aaPredicted RBP16.18■□□□□ 0.18
CTTN-201ENST00000301843 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
CTTN-201ENST00000301843 PIBF1Q8WXW3 757 aa16.17■□□□□ 0.18
CTTN-201ENST00000301843 MYL6BP14649 208 aa16.17■□□□□ 0.18
CTTN-201ENST00000301843 CREB3L3Q68CJ9 461 aa16.17■□□□□ 0.18
CTTN-201ENST00000301843 ZNF710Q8N1W2 664 aa16.17■□□□□ 0.18
CTTN-201ENST00000301843 TAOK2Q9UL54 1235 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms