RNA–Protein interactions for RNA: ENST00000299714.7

SEC11C-201, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 5

Gene SEC11C, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-201ENST00000299714 C2CD5Q86YS7 1000 aa17.29■□□□□ 0.36
SEC11C-201ENST00000299714 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
SEC11C-201ENST00000299714 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
SEC11C-201ENST00000299714 ZNF652Q9Y2D9 606 aa17.29■□□□□ 0.36
SEC11C-201ENST00000299714 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
SEC11C-201ENST00000299714 TIAM2Q8IVF5 1701 aa17.29■□□□□ 0.36
SEC11C-201ENST00000299714 H0YIN7 160 aa17.28■□□□□ 0.36
SEC11C-201ENST00000299714 NPHP1O15259 732 aa17.28■□□□□ 0.36
SEC11C-201ENST00000299714 PRR5LQ6MZQ0 368 aa17.28■□□□□ 0.36
SEC11C-201ENST00000299714 CNBD1Q8NA66 436 aa17.28■□□□□ 0.36
SEC11C-201ENST00000299714 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
SEC11C-201ENST00000299714 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
SEC11C-201ENST00000299714 NBPF26B4DH59 902 aa17.27■□□□□ 0.36
SEC11C-201ENST00000299714 PDE6BP35913 854 aa17.27■□□□□ 0.36
SEC11C-201ENST00000299714 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.36
SEC11C-201ENST00000299714 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.36
SEC11C-201ENST00000299714 NBPF15Q8N660 670 aa17.27■□□□□ 0.36
SEC11C-201ENST00000299714 TTLL6Q8N841 843 aa17.27■□□□□ 0.36
SEC11C-201ENST00000299714 BRIP1Q9BX63 1249 aa17.27■□□□□ 0.36
SEC11C-201ENST00000299714 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
SEC11C-201ENST00000299714 NUP98P52948 1817 aa17.26■□□□□ 0.35
SEC11C-201ENST00000299714 RGL2O15211 777 aa17.26■□□□□ 0.35
SEC11C-201ENST00000299714 ST5P78524 1137 aa17.26■□□□□ 0.35
SEC11C-201ENST00000299714 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
SEC11C-201ENST00000299714 C9orf131Q5VYM1 1079 aa17.26■□□□□ 0.35
SEC11C-201ENST00000299714 CCDC88AQ3V6T2 1871 aa17.26■□□□□ 0.35
SEC11C-201ENST00000299714 RIPK4P57078 832 aa17.25■□□□□ 0.35
SEC11C-201ENST00000299714 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
SEC11C-201ENST00000299714 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEC11C-201ENST00000299714 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
SEC11C-201ENST00000299714 FER1L6Q2WGJ9 1857 aa17.24■□□□□ 0.35
SEC11C-201ENST00000299714 TMPOP42166 694 aaKnown RBP17.23■□□□□ 0.35
SEC11C-201ENST00000299714 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
SEC11C-201ENST00000299714 NBPF5PQ86XG9 351 aaPredicted RBP17.23■□□□□ 0.35
SEC11C-201ENST00000299714 CCDC24Q8N4L8 307 aa17.23■□□□□ 0.35
SEC11C-201ENST00000299714 ZNF622Q969S3 477 aaKnown RBP eCLIP17.23■□□□□ 0.35
SEC11C-201ENST00000299714 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
SEC11C-201ENST00000299714 DICER1Q9UPY3 1922 aaKnown RBP17.22■□□□□ 0.35
SEC11C-201ENST00000299714 KIF3CO14782 793 aa17.22■□□□□ 0.35
SEC11C-201ENST00000299714 RASSF7Q02833 373 aa17.22■□□□□ 0.35
SEC11C-201ENST00000299714 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.35
SEC11C-201ENST00000299714 SLX4Q8IY92 1834 aa17.21■□□□□ 0.35
SEC11C-201ENST00000299714 CCDC146Q8IYE0 955 aa17.21■□□□□ 0.35
SEC11C-201ENST00000299714 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.35
SEC11C-201ENST00000299714 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
SEC11C-201ENST00000299714 NIP7Q9Y221 180 aaKnown RBP eCLIP17.21■□□□□ 0.35
SEC11C-201ENST00000299714 ERBB4Q15303 1308 aa17.21■□□□□ 0.34
SEC11C-201ENST00000299714 KIF6Q6ZMV9 814 aa17.2■□□□□ 0.34
SEC11C-201ENST00000299714 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
SEC11C-201ENST00000299714 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
SEC11C-201ENST00000299714 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
SEC11C-201ENST00000299714 SRGNP10124 158 aa17.19■□□□□ 0.34
SEC11C-201ENST00000299714 MYL6BP14649 208 aa17.19■□□□□ 0.34
SEC11C-201ENST00000299714 LMNB1P20700 586 aa17.19■□□□□ 0.34
SEC11C-201ENST00000299714 STYK1Q6J9G0 422 aa17.19■□□□□ 0.34
SEC11C-201ENST00000299714 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
SEC11C-201ENST00000299714 CNKSR1Q969H4 720 aa17.19■□□□□ 0.34
SEC11C-201ENST00000299714 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
SEC11C-201ENST00000299714 MAP3K15Q6ZN16 1313 aa17.19■□□□□ 0.34
SEC11C-201ENST00000299714 ERVV-1B6SEH8 477 aa17.18■□□□□ 0.34
SEC11C-201ENST00000299714 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
SEC11C-201ENST00000299714 HLFQ16534 295 aa17.18■□□□□ 0.34
SEC11C-201ENST00000299714 TPTE2Q6XPS3 522 aa17.18■□□□□ 0.34
SEC11C-201ENST00000299714 MASTLQ96GX5 879 aa17.18■□□□□ 0.34
SEC11C-201ENST00000299714 NMRK2Q9NPI5 230 aa17.18■□□□□ 0.34
SEC11C-201ENST00000299714 NFKBIEO00221 500 aa17.17■□□□□ 0.34
SEC11C-201ENST00000299714 C21orf2O43822 256 aa17.17■□□□□ 0.34
SEC11C-201ENST00000299714 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
SEC11C-201ENST00000299714 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
SEC11C-201ENST00000299714 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
SEC11C-201ENST00000299714 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
SEC11C-201ENST00000299714 NYXQ9GZU5 481 aa17.16■□□□□ 0.34
SEC11C-201ENST00000299714 ADAMTS8Q9UP79 889 aa17.16■□□□□ 0.34
SEC11C-201ENST00000299714 TOMM70O94826 608 aa17.15■□□□□ 0.34
SEC11C-201ENST00000299714 HSPA6P17066 643 aa17.15■□□□□ 0.34
SEC11C-201ENST00000299714 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
SEC11C-201ENST00000299714 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
SEC11C-201ENST00000299714 TTLL7Q6ZT98 887 aa17.15■□□□□ 0.34
SEC11C-201ENST00000299714 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
SEC11C-201ENST00000299714 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
SEC11C-201ENST00000299714 NPR1P16066 1061 aa17.14■□□□□ 0.33
SEC11C-201ENST00000299714 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
SEC11C-201ENST00000299714 PRELPP51888 382 aa17.14■□□□□ 0.33
SEC11C-201ENST00000299714 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
SEC11C-201ENST00000299714 TAOK3Q9H2K8 898 aa17.14■□□□□ 0.33
SEC11C-201ENST00000299714 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
SEC11C-201ENST00000299714 ABCC12Q96J65 1359 aa17.14■□□□□ 0.33
SEC11C-201ENST00000299714 KLRG2A4D1S0 409 aaPredicted RBP17.13■□□□□ 0.33
SEC11C-201ENST00000299714 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
SEC11C-201ENST00000299714 GIGYF2Q6Y7W6 1299 aaKnown RBP17.12■□□□□ 0.33
SEC11C-201ENST00000299714 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
SEC11C-201ENST00000299714 UBN2Q6ZU65 1347 aa17.12■□□□□ 0.33
SEC11C-201ENST00000299714 WDR90Q96KV7 1748 aa17.12■□□□□ 0.33
SEC11C-201ENST00000299714 GLTPD2A6NH11 291 aa17.11■□□□□ 0.33
SEC11C-201ENST00000299714 CHL1O00533 1208 aa17.11■□□□□ 0.33
SEC11C-201ENST00000299714 GPTP24298 496 aa17.11■□□□□ 0.33
SEC11C-201ENST00000299714 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
SEC11C-201ENST00000299714 RBM46Q8TBY0 533 aaKnown RBP17.11■□□□□ 0.33
SEC11C-201ENST00000299714 CEP350Q5VT06 3117 aa17.11■□□□□ 0.33
SEC11C-201ENST00000299714 PDIA6Q15084 440 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms