RNA–Protein interactions for RNA: ENST00000299608.6

TMX3-201, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMX3, Length 4,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-201ENST00000299608 KIAA0556O60303 1618 aa12.5□□□□□ -0.41
TMX3-201ENST00000299608 HOXC9P31274 260 aa12.5□□□□□ -0.41
TMX3-201ENST00000299608 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
TMX3-201ENST00000299608 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
TMX3-201ENST00000299608 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
TMX3-201ENST00000299608 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
TMX3-201ENST00000299608 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
TMX3-201ENST00000299608 IP6K1Q92551 441 aa12.5□□□□□ -0.41
TMX3-201ENST00000299608 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
TMX3-201ENST00000299608 GOLGA8BA8MQT2 603 aa12.49□□□□□ -0.41
TMX3-201ENST00000299608 TTF1Q15361 905 aaPredicted RBP12.49□□□□□ -0.41
TMX3-201ENST00000299608 TSPYL6Q8N831 410 aa12.49□□□□□ -0.41
TMX3-201ENST00000299608 C8orf76Q96K31 380 aa12.49□□□□□ -0.41
TMX3-201ENST00000299608 ADAMTS12P58397 1594 aa12.49□□□□□ -0.41
TMX3-201ENST00000299608 GPS2Q13227 327 aa12.49□□□□□ -0.41
TMX3-201ENST00000299608 CWF19L2Q2TBE0 894 aaKnown RBP12.49□□□□□ -0.41
TMX3-201ENST00000299608 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
TMX3-201ENST00000299608 STX8Q9UNK0 236 aa12.49□□□□□ -0.41
TMX3-201ENST00000299608 PA2G4Q9UQ80 394 aaKnown RBP12.49□□□□□ -0.41
TMX3-201ENST00000299608 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 CAGE1Q8TC20 777 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 SMARCE1Q969G3 411 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMX3-201ENST00000299608 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
TMX3-201ENST00000299608 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
TMX3-201ENST00000299608 SPTY2D1Q68D10 685 aaPredicted RBP12.48□□□□□ -0.41
TMX3-201ENST00000299608 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 ZNHIT6Q9NWK9 470 aaKnown RBP12.48□□□□□ -0.41
TMX3-201ENST00000299608 CCDC173Q0VFZ6 552 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 CATIPQ7Z7H3 387 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 CEP57L1Q8IYX8 460 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 CABP5Q9NP86 173 aa12.48□□□□□ -0.41
TMX3-201ENST00000299608 UHRF1BP1Q6BDS2 1440 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 GNPATO15228 680 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 NUP160Q12769 1436 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 IGHDP01880 384 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
TMX3-201ENST00000299608 UQCRFS1P1P0C7P4 283 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 CYP7A1P22680 504 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 GRM1Q13255 1194 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 TMEM67Q5HYA8 995 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 FAM43AQ8N2R8 423 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 OGFOD1Q8N543 542 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 ZC3H12CQ9C0D7 883 aaKnown RBP12.47□□□□□ -0.41
TMX3-201ENST00000299608 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
TMX3-201ENST00000299608 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
TMX3-201ENST00000299608 NLRP5P59047 1200 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 PDE4BQ07343 736 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 PPFIBP1Q86W92 1011 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 ARHGAP45Q92619 1136 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 SCLT1Q96NL6 688 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 DACH1Q9UI36 760 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 RALGAPBQ86X10 1494 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 CCDC194A0A1B0GVG4 234 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 MYO1BO43795 1136 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.41
TMX3-201ENST00000299608 NBPF14Q5TI25 921 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 MFSD6Q6ZSS7 791 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 DEF6Q9H4E7 631 aa12.46□□□□□ -0.41
TMX3-201ENST00000299608 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.42
TMX3-201ENST00000299608 USP16Q9Y5T5 823 aa12.46□□□□□ -0.42
TMX3-201ENST00000299608 IRS4O14654 1257 aaPredicted RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 TNIP1Q15025 636 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 LIMCH1Q9UPQ0 1083 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 CAMK4Q16566 473 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 PUS7Q96PZ0 661 aaKnown RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 ASXL1Q8IXJ9 1541 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 NOM1Q5C9Z4 860 aaKnown RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 CRNKL1Q9BZJ0 848 aaKnown RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 CCDC39Q9UFE4 941 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 ATP10AO60312 1499 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 CUL5Q93034 780 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 TCEANC2Q96MN5 208 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
TMX3-201ENST00000299608 JAG2Q9Y219 1238 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 WDR62O43379 1518 aa12.45□□□□□ -0.42
TMX3-201ENST00000299608 IL15P40933 162 aaPredicted RBP12.44□□□□□ -0.42
TMX3-201ENST00000299608 SH2B1Q9NRF2 756 aaPredicted RBP12.44□□□□□ -0.42
TMX3-201ENST00000299608 ABCC1P33527 1531 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 PICALMQ13492 652 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
TMX3-201ENST00000299608 TNNQ9UQP3 1299 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 POLD1P28340 1107 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 LTKP29376 864 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
TMX3-201ENST00000299608 KLHL10Q6JEL2 608 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms