RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 ZSCAN25Q6NSZ9 544 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 NEBLO76041 1014 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 DESP17661 470 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 UBE4AQ14139 1066 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 FEZ1Q99689 392 aa12.47□□□□□ -0.41
PKNOX1-201ENST00000291547 LMAN1P49257 510 aa12.46□□□□□ -0.41
PKNOX1-201ENST00000291547 WASF1Q92558 559 aa12.46□□□□□ -0.41
PKNOX1-201ENST00000291547 TDO2P48775 406 aa12.46□□□□□ -0.41
PKNOX1-201ENST00000291547 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
PKNOX1-201ENST00000291547 PIBF1Q8WXW3 757 aa12.46□□□□□ -0.41
PKNOX1-201ENST00000291547 CEP63Q96MT8 703 aa12.46□□□□□ -0.42
PKNOX1-201ENST00000291547 MNAT1P51948 309 aa12.46□□□□□ -0.42
PKNOX1-201ENST00000291547 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.42
PKNOX1-201ENST00000291547 WDR63Q8IWG1 891 aa12.46□□□□□ -0.42
PKNOX1-201ENST00000291547 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.42
PKNOX1-201ENST00000291547 GOPCQ9HD26 462 aa12.46□□□□□ -0.42
PKNOX1-201ENST00000291547 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 FKBP15Q5T1M5 1219 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 STAMBPO95630 424 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 GABPB1Q06547 395 aaPredicted RBP12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 TRPM2O94759 1503 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 HLTFQ14527 1009 aaKnown RBP eCLIP12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
PKNOX1-201ENST00000291547 GCOM1H8Y6P7 765 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 PPP1R12BO60237 982 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 NEMFO60524 1076 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 MYZAPP0CAP1 466 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 CCDC97Q96F63 343 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 IQGAP3Q86VI3 1631 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 SSFA2P28290 1259 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 BMS1Q14692 1282 aaKnown RBP12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 CEP126Q9P2H0 1117 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 VPS36Q86VN1 386 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 ANAPC15P60006 121 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 PANK2Q9BZ23 570 aa12.44□□□□□ -0.42
PKNOX1-201ENST00000291547 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 TET3O43151 1660 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 ABCC3O15438 1527 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 UNC13BO14795 1591 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 MACROD2A1Z1Q3 448 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 ZNF76P36508 570 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 DNAAF4Q8WXU2 420 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
PKNOX1-201ENST00000291547 PTPRTO14522 1441 aa12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 TNPO1Q92973 898 aaKnown RBP12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 NUP88Q99567 741 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 TDRD12Q587J7 1177 aaKnown RBP12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 TESK2Q96S53 571 aa12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 GSDMDP57764 484 aa12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 SPECC1LQ69YQ0 1117 aa12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 YEATS4O95619 227 aa12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 MATR3P43243 847 aaKnown RBP eCLIP12.42□□□□□ -0.42
PKNOX1-201ENST00000291547 CTAGE5O15320 804 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 ADCY5O95622 1261 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 ZNF622Q969S3 477 aaKnown RBP eCLIP12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 NAA15Q9BXJ9 866 aaKnown RBP12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 OGFRQ9NZT2 677 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 ZKSCAN5Q9Y2L8 839 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 GLI2P10070 1586 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 IDH1O75874 414 aaKnown RBP12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 USP5P45974 858 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 SNW1Q13573 536 aaKnown RBP12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 ZSWIM4Q9H7M6 989 aa12.41□□□□□ -0.42
PKNOX1-201ENST00000291547 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 TMEM57Q8N5G2 664 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 PRDM15P57071 1507 aaPredicted RBP12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 MAATS1Q7Z4T9 603 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 MYL6BP14649 208 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 C8orf76Q96K31 380 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 SH2B1Q9NRF2 756 aaPredicted RBP12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 EFCAB6Q5THR3 1501 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 UGGT1Q9NYU2 1555 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 GIGYF2Q6Y7W6 1299 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 PPM1EQ8WY54 764 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
PKNOX1-201ENST00000291547 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms