RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 INTS3Q68E01 1043 aaKnown RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 NLRP13Q86W25 1043 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SPC24Q8NBT2 197 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 TSC1Q92574 1164 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 PPP2R3CQ969Q6 453 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.05□□□□□ -1.63e-6■■■■■ 34.1
NCOA1-201ENST00000288599 CABP5Q9NP86 173 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 CFDP1Q9UEE9 299 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 ZRANB1Q9UGI0 708 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 EVC2Q86UK5 1308 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 LRPPRCP42704 1394 aaKnown RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 MTUS2Q5JR59 1369 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 NASPP49321 788 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 PSMD2Q13200 908 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 TMCO4Q5TGY1 634 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SLC26A8Q96RN1 970 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 FAM8A1Q9UBU6 413 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 V9GY48 417 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 CCDC7Q96M83 1385 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 TTC36A6NLP5 189 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 KIF3CO14782 793 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 MRE11P49959 708 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 CCDC57Q2TAC2 916 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 CPLX4Q7Z7G2 160 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 CKAP2LQ8IYA6 745 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SMARCE1Q969G3 411 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SLC5A4Q9NY91 659 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 PCDHB13Q9Y5F0 798 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 ARHGEF5Q12774 1597 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SHTN1A0MZ66 631 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 ERC2O15083 957 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 ACTN2P35609 894 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 PPFIA1Q13136 1202 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 NEUROD6Q96NK8 337 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 LBHD1Q9BQE6 289 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 TBC1D12O60347 775 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 SMC2O95347 1197 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 EIF2S2P20042 333 aaKnown RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 AK2P54819 239 aa5.05□□□□□ -1.6
NCOA1-201ENST00000288599 TPD52P55327 224 aaPredicted RBP5.05□□□□□ -1.6
NCOA1-201ENST00000288599 NOLC1Q14978 699 aaKnown RBP eCLIP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 IRAK1BP1Q5VVH5 260 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 TNPO1Q92973 898 aaKnown RBP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 L3MBTL2Q969R5 705 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 GPRASP1Q5JY77 1395 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SAMD9LQ8IVG5 1584 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 VPS37CA5D8V6 355 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 GOLGA6BA6NDN3 693 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SLC4A8Q2Y0W8 1093 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SASS6Q6UVJ0 657 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 RIC3Q7Z5B4 369 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SMC1BQ8NDV3 1235 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 NEUROD4Q9HD90 331 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 ANO2Q9NQ90 1003 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SYNJ2O15056 1496 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 ZKSCAN1P17029 563 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 ZNF75DP51815 510 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 FILIP1LQ4L180 1135 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 EAPPQ56P03 285 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 DPY19L2Q6NUT2 758 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 DAAM2Q86T65 1068 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 GAS2L2Q8NHY3 880 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SECISBP2LQ93073 1101 aaKnown RBP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 FMNL2Q96PY5 1086 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 ZBED2Q9BTP6 218 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 NACAP1Q9BZK3 213 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SYNCQ9H7C4 482 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 SUDS3Q9H7L9 328 aaPredicted RBP5.04□□□□□ -1.6
NCOA1-201ENST00000288599 CCNB2O95067 398 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 CCDC6Q16204 474 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 MAP3K11Q16584 847 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 RCAN3Q9UKA8 241 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 PPME1Q9Y570 386 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 UNC13BO14795 1591 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 MAST1Q9Y2H9 1570 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 PTGDRQ13258 359 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 PLCB4Q15147 1175 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 OGFOD1Q8N543 542 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 MPHOSPH8Q99549 860 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 TRAIPQ9BWF2 469 aa5.04□□□□□ -1.6
NCOA1-201ENST00000288599 MUM1L1Q5H9M0 696 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 MCM10Q7L590 875 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 CHAMP1Q96JM3 812 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 C16orf45Q96MC5 204 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 RAB3IPQ96QF0 476 aaPredicted RBP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 EIF3AQ14152 1382 aaKnown RBP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 TTC21AQ8NDW8 1320 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 EIF3DO15371 548 aaKnown RBP eCLIP5.03□□□□□ -1.6
NCOA1-201ENST00000288599 PSMC4P43686 418 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 ANAPC4Q9UJX5 808 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 RAB23Q9ULC3 237 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 CRCPO75575 148 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 NEK4P51957 841 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 TSPY1Q01534 308 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 PLS1Q14651 629 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 BANK1Q8NDB2 785 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 RALGAPBQ86X10 1494 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 NBPF26B4DH59 902 aa5.03□□□□□ -1.6
NCOA1-201ENST00000288599 U2AF1L5P0DN76 240 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms