RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 SDSP20132 328 aa26.36■■□□□ 1.81
GFRA3-201ENST00000274721 BCL9O00512 1426 aa26.35■■□□□ 1.81
GFRA3-201ENST00000274721 HSP90AB4PQ58FF6 505 aa26.35■■□□□ 1.81
GFRA3-201ENST00000274721 RHPN1Q8TCX5 695 aa26.35■■□□□ 1.81
GFRA3-201ENST00000274721 SLIT2O94813 1529 aa26.35■■□□□ 1.81
GFRA3-201ENST00000274721 RBM25P49756 843 aaKnown RBP26.34■■□□□ 1.81
GFRA3-201ENST00000274721 ARFGEF2Q9Y6D5 1785 aa26.34■■□□□ 1.81
GFRA3-201ENST00000274721 NUTM2BA6NNL0 878 aaPredicted RBP26.34■■□□□ 1.81
GFRA3-201ENST00000274721 NUTM2EB1AL46 878 aaPredicted RBP26.34■■□□□ 1.81
GFRA3-201ENST00000274721 MX1P20591 662 aa26.34■■□□□ 1.81
GFRA3-201ENST00000274721 NUTM2AQ8IVF1 878 aaPredicted RBP26.34■■□□□ 1.81
GFRA3-201ENST00000274721 KIF1BPQ96EK5 621 aa26.34■■□□□ 1.81
GFRA3-201ENST00000274721 SLC4A3P48751 1232 aa26.33■■□□□ 1.81
GFRA3-201ENST00000274721 TEX13AQ9BXU3 409 aaPredicted RBP26.33■■□□□ 1.81
GFRA3-201ENST00000274721 BICC1Q9H694 974 aaKnown RBP26.33■■□□□ 1.81
GFRA3-201ENST00000274721 SPATA31A5Q5VU36 1347 aa26.33■■□□□ 1.8
GFRA3-201ENST00000274721 SPATA31A7Q8IWB4 1347 aa26.33■■□□□ 1.8
GFRA3-201ENST00000274721 UBAP1LF5GYI3 381 aa26.32■■□□□ 1.8
GFRA3-201ENST00000274721 NWD2Q9ULI1 1742 aa26.32■■□□□ 1.8
GFRA3-201ENST00000274721 COL15A1P39059 1388 aa26.31■■□□□ 1.8
GFRA3-201ENST00000274721 EIF5BO60841 1220 aaKnown RBP26.31■■□□□ 1.8
GFRA3-201ENST00000274721 TTLL7Q6ZT98 887 aa26.31■■□□□ 1.8
GFRA3-201ENST00000274721 IL1RAPL2Q9NP60 686 aa26.31■■□□□ 1.8
GFRA3-201ENST00000274721 DAXXQ9UER7 740 aaPredicted RBP26.31■■□□□ 1.8
GFRA3-201ENST00000274721 AOX1Q06278 1338 aa26.3■■□□□ 1.8
GFRA3-201ENST00000274721 BARGINQ6ZT62 677 aa26.29■■□□□ 1.8
GFRA3-201ENST00000274721 KAT6BQ8WYB5 2073 aa26.28■■□□□ 1.8
GFRA3-201ENST00000274721 DDB1Q16531 1140 aa26.27■■□□□ 1.8
GFRA3-201ENST00000274721 DNAJC10Q8IXB1 793 aa26.27■■□□□ 1.8
GFRA3-201ENST00000274721 TUBGCP6Q96RT7 1819 aa26.27■■□□□ 1.8
GFRA3-201ENST00000274721 ATP5J2-PTCD1G3V325 749 aa26.27■■□□□ 1.8
GFRA3-201ENST00000274721 CASP7P55210 303 aa26.27■■□□□ 1.8
GFRA3-201ENST00000274721 NUP188Q5SRE5 1749 aa26.27■■□□□ 1.8
GFRA3-201ENST00000274721 BECN1Q14457 450 aa26.26■■□□□ 1.79
GFRA3-201ENST00000274721 EPHA10Q5JZY3 1008 aa26.26■■□□□ 1.79
GFRA3-201ENST00000274721 TSHZ3Q63HK5 1081 aa26.26■■□□□ 1.79
GFRA3-201ENST00000274721 AFDNP55196 1824 aaKnown RBP26.26■■□□□ 1.79
GFRA3-201ENST00000274721 PA2G4Q9UQ80 394 aaKnown RBP26.26■■□□□ 1.79
GFRA3-201ENST00000274721 RABL6Q3YEC7 729 aaPredicted RBP26.25■■□□□ 1.79
GFRA3-201ENST00000274721 ERC1Q8IUD2 1116 aa26.25■■□□□ 1.79
GFRA3-201ENST00000274721 SLC4A9Q96Q91 983 aa26.25■■□□□ 1.79
GFRA3-201ENST00000274721 A0A087WZG4 1122 aa26.24■■□□□ 1.79
GFRA3-201ENST00000274721 STARD3NLO95772 234 aa26.24■■□□□ 1.79
GFRA3-201ENST00000274721 RBM42Q9BTD8 480 aaKnown RBP26.24■■□□□ 1.79
GFRA3-201ENST00000274721 H7C1W4 665 aa26.24■■□□□ 1.79
GFRA3-201ENST00000274721 PRIM1P49642 420 aaKnown RBP26.24■■□□□ 1.79
GFRA3-201ENST00000274721 NUTM1Q86Y26 1132 aa26.24■■□□□ 1.79
GFRA3-201ENST00000274721 JCADQ9P266 1359 aa26.23■■□□□ 1.79
GFRA3-201ENST00000274721 CASC1Q6TDU7 716 aa26.23■■□□□ 1.79
GFRA3-201ENST00000274721 UBE3BQ7Z3V4 1068 aa26.23■■□□□ 1.79
GFRA3-201ENST00000274721 UNC5CLQ8IV45 518 aa26.22■■□□□ 1.79
GFRA3-201ENST00000274721 USP42Q9H9J4 1324 aaKnown RBP26.22■■□□□ 1.79
GFRA3-201ENST00000274721 OS9Q13438 667 aaPredicted RBP26.22■■□□□ 1.79
GFRA3-201ENST00000274721 MARCH10Q8NA82 808 aaPredicted RBP26.22■■□□□ 1.79
GFRA3-201ENST00000274721 TBC1D2Q9BYX2 928 aa26.22■■□□□ 1.79
GFRA3-201ENST00000274721 CCDC191Q8NCU4 936 aa26.21■■□□□ 1.79
GFRA3-201ENST00000274721 PI4K2BQ8TCG2 481 aa26.21■■□□□ 1.79
GFRA3-201ENST00000274721 KIF2CQ99661 725 aa26.21■■□□□ 1.79
GFRA3-201ENST00000274721 ZBTB3Q9H5J0 574 aa26.21■■□□□ 1.79
GFRA3-201ENST00000274721 CLASRPQ8N2M8 674 aaKnown RBP26.21■■□□□ 1.79
GFRA3-201ENST00000274721 SYTL4Q96C24 671 aaPredicted RBP26.21■■□□□ 1.79
GFRA3-201ENST00000274721 CWC25Q9NXE8 425 aaPredicted RBP26.21■■□□□ 1.79
GFRA3-201ENST00000274721 CYP19A1P11511 503 aaPredicted RBP26.2■■□□□ 1.78
GFRA3-201ENST00000274721 JARID2Q92833 1246 aaPredicted RBP26.2■■□□□ 1.78
GFRA3-201ENST00000274721 DOT1LQ8TEK3 1739 aa26.2■■□□□ 1.78
GFRA3-201ENST00000274721 SASH1O94885 1247 aa26.19■■□□□ 1.78
GFRA3-201ENST00000274721 USP26Q9BXU7 913 aa26.19■■□□□ 1.78
GFRA3-201ENST00000274721 COPRSQ9NQ92 184 aa26.19■■□□□ 1.78
GFRA3-201ENST00000274721 RFX5P48382 616 aaPredicted RBP26.19■■□□□ 1.78
GFRA3-201ENST00000274721 G3BP1Q13283 466 aaKnown RBP eCLIP26.19■■□□□ 1.78
GFRA3-201ENST00000274721 BCL9LQ86UU0 1499 aa26.18■■□□□ 1.78
GFRA3-201ENST00000274721 ISCA1Q9BUE6 129 aa26.18■■□□□ 1.78
GFRA3-201ENST00000274721 TRIM28Q13263 835 aaKnown RBP26.17■■□□□ 1.78
GFRA3-201ENST00000274721 CCDC9Q9Y3X0 531 aaKnown RBP26.17■■□□□ 1.78
GFRA3-201ENST00000274721 TTC41PQ6P2S7 1318 aa26.17■■□□□ 1.78
GFRA3-201ENST00000274721 TCIRG1Q13488 830 aa26.17■■□□□ 1.78
GFRA3-201ENST00000274721 VPS72Q15906 364 aa26.16■■□□□ 1.78
GFRA3-201ENST00000274721 FNBP4Q8N3X1 1017 aaPredicted RBP26.16■■□□□ 1.78
GFRA3-201ENST00000274721 FOXO4P98177 505 aa26.15■■□□□ 1.78
GFRA3-201ENST00000274721 NGLY1Q96IV0 654 aa26.15■■□□□ 1.78
GFRA3-201ENST00000274721 ERC2O15083 957 aa26.15■■□□□ 1.78
GFRA3-201ENST00000274721 PTPN12Q05209 780 aaKnown RBP26.15■■□□□ 1.78
GFRA3-201ENST00000274721 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.15■■□□□ 1.78
GFRA3-201ENST00000274721 TJP1Q07157 1748 aa26.15■■□□□ 1.78
GFRA3-201ENST00000274721 TRIM6-TRIM34B2RNG4 842 aa26.14■■□□□ 1.78
GFRA3-201ENST00000274721 KLHDC4Q8TBB5 520 aa26.14■■□□□ 1.78
GFRA3-201ENST00000274721 C8orf37Q96NL8 207 aa26.14■■□□□ 1.78
GFRA3-201ENST00000274721 REC8O95072 547 aa26.14■■□□□ 1.77
GFRA3-201ENST00000274721 CHMLP26374 656 aa26.14■■□□□ 1.77
GFRA3-201ENST00000274721 SNX21Q969T3 373 aa26.14■■□□□ 1.77
GFRA3-201ENST00000274721 RILPL2Q969X0 211 aa26.14■■□□□ 1.77
GFRA3-201ENST00000274721 KIF6Q6ZMV9 814 aa26.13■■□□□ 1.77
GFRA3-201ENST00000274721 MAP3K15Q6ZN16 1313 aa26.13■■□□□ 1.77
GFRA3-201ENST00000274721 EAF2Q96CJ1 260 aaPredicted RBP26.12■■□□□ 1.77
GFRA3-201ENST00000274721 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.12■■□□□ 1.77
GFRA3-201ENST00000274721 SPATA31A6Q5VVP1 1343 aa26.12■■□□□ 1.77
GFRA3-201ENST00000274721 GLRX3O76003 335 aaKnown RBP26.12■■□□□ 1.77
GFRA3-201ENST00000274721 LMBR1LQ6UX01 489 aa26.12■■□□□ 1.77
GFRA3-201ENST00000274721 SIL1Q9H173 461 aa26.12■■□□□ 1.77
GFRA3-201ENST00000274721 ECHDC1Q9NTX5 307 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms