RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 CLEC4GQ6UXB4 293 aa20.28■□□□□ 0.84
SOD1-201ENST00000270142 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
SOD1-201ENST00000270142 PLEKHF1Q96S99 279 aa20.27■□□□□ 0.84
SOD1-201ENST00000270142 ZNF652Q9Y2D9 606 aa20.27■□□□□ 0.84
SOD1-201ENST00000270142 WDR90Q96KV7 1748 aa20.27■□□□□ 0.83
SOD1-201ENST00000270142 SRGNP10124 158 aa20.26■□□□□ 0.83
SOD1-201ENST00000270142 HTRA3P83110 453 aa20.26■□□□□ 0.83
SOD1-201ENST00000270142 STYK1Q6J9G0 422 aa20.26■□□□□ 0.83
SOD1-201ENST00000270142 NBPF5PQ86XG9 351 aaPredicted RBP20.26■□□□□ 0.83
SOD1-201ENST00000270142 NEFMP07197 916 aa20.25■□□□□ 0.83
SOD1-201ENST00000270142 CNKSR1Q969H4 720 aa20.25■□□□□ 0.83
SOD1-201ENST00000270142 MASTLQ96GX5 879 aa20.25■□□□□ 0.83
SOD1-201ENST00000270142 CCDC88AQ3V6T2 1871 aa20.24■□□□□ 0.83
SOD1-201ENST00000270142 LAMB4A4D0S4 1761 aa20.24■□□□□ 0.83
SOD1-201ENST00000270142 PRPF40BQ6NWY9 871 aaKnown RBP20.24■□□□□ 0.83
SOD1-201ENST00000270142 SMC1BQ8NDV3 1235 aa20.24■□□□□ 0.83
SOD1-201ENST00000270142 NIP7Q9Y221 180 aaKnown RBP eCLIP20.24■□□□□ 0.83
SOD1-201ENST00000270142 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
SOD1-201ENST00000270142 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
SOD1-201ENST00000270142 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
SOD1-201ENST00000270142 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
SOD1-201ENST00000270142 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
SOD1-201ENST00000270142 HLFQ16534 295 aa20.23■□□□□ 0.83
SOD1-201ENST00000270142 TAOK3Q9H2K8 898 aa20.23■□□□□ 0.83
SOD1-201ENST00000270142 LTBP3Q9NS15 1303 aa20.23■□□□□ 0.83
SOD1-201ENST00000270142 ARFGEF2Q9Y6D5 1785 aa20.22■□□□□ 0.83
SOD1-201ENST00000270142 RGL2O15211 777 aa20.22■□□□□ 0.83
SOD1-201ENST00000270142 VEGFAP15692 232 aaPredicted RBP20.22■□□□□ 0.83
SOD1-201ENST00000270142 ERFEQ4G0M1 354 aa20.22■□□□□ 0.83
SOD1-201ENST00000270142 IFFO2Q5TF58 517 aa20.22■□□□□ 0.83
SOD1-201ENST00000270142 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
SOD1-201ENST00000270142 THUMPD2Q9BTF0 503 aaKnown RBP20.22■□□□□ 0.83
SOD1-201ENST00000270142 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
SOD1-201ENST00000270142 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
SOD1-201ENST00000270142 EIF4A1P60842 406 aaKnown RBP20.21■□□□□ 0.83
SOD1-201ENST00000270142 POTECB2RU33 542 aa20.2■□□□□ 0.82
SOD1-201ENST00000270142 TPTE2Q6XPS3 522 aa20.2■□□□□ 0.82
SOD1-201ENST00000270142 KLRG2A4D1S0 409 aaPredicted RBP20.19■□□□□ 0.82
SOD1-201ENST00000270142 SOGA3Q5TF21 947 aa20.19■□□□□ 0.82
SOD1-201ENST00000270142 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
SOD1-201ENST00000270142 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
SOD1-201ENST00000270142 C7orf43Q8WVR3 580 aa20.19■□□□□ 0.82
SOD1-201ENST00000270142 KLRG1Q96E93 195 aa20.19■□□□□ 0.82
SOD1-201ENST00000270142 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
SOD1-201ENST00000270142 DICER1Q9UPY3 1922 aaKnown RBP20.18■□□□□ 0.82
SOD1-201ENST00000270142 NPR1P16066 1061 aa20.18■□□□□ 0.82
SOD1-201ENST00000270142 CCDC93Q567U6 631 aa20.17■□□□□ 0.82
SOD1-201ENST00000270142 PNNQ9H307 717 aaKnown RBP20.17■□□□□ 0.82
SOD1-201ENST00000270142 TTLL7Q6ZT98 887 aa20.16■□□□□ 0.82
SOD1-201ENST00000270142 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
SOD1-201ENST00000270142 ERVV-1B6SEH8 477 aa20.15■□□□□ 0.82
SOD1-201ENST00000270142 OLFM4Q6UX06 510 aa20.15■□□□□ 0.82
SOD1-201ENST00000270142 MAP3K15Q6ZN16 1313 aa20.15■□□□□ 0.82
SOD1-201ENST00000270142 ABCC12Q96J65 1359 aa20.15■□□□□ 0.82
SOD1-201ENST00000270142 DDNO94850 711 aaPredicted RBP20.14■□□□□ 0.81
SOD1-201ENST00000270142 MYL6BP14649 208 aa20.14■□□□□ 0.81
SOD1-201ENST00000270142 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.81
SOD1-201ENST00000270142 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
SOD1-201ENST00000270142 RALBP1Q15311 655 aa20.13■□□□□ 0.81
SOD1-201ENST00000270142 KIF6Q6ZMV9 814 aa20.13■□□□□ 0.81
SOD1-201ENST00000270142 NUTM1Q86Y26 1132 aa20.13■□□□□ 0.81
SOD1-201ENST00000270142 JMYQ8N9B5 988 aa20.13■□□□□ 0.81
SOD1-201ENST00000270142 TSPYL4Q9UJ04 414 aa20.13■□□□□ 0.81
SOD1-201ENST00000270142 UBN2Q6ZU65 1347 aa20.12■□□□□ 0.81
SOD1-201ENST00000270142 NYXQ9GZU5 481 aa20.12■□□□□ 0.81
SOD1-201ENST00000270142 ZBTB3Q9H5J0 574 aa20.12■□□□□ 0.81
SOD1-201ENST00000270142 GPTP24298 496 aa20.11■□□□□ 0.81
SOD1-201ENST00000270142 RIPK4P57078 832 aa20.11■□□□□ 0.81
SOD1-201ENST00000270142 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
SOD1-201ENST00000270142 NUP98P52948 1817 aa20.11■□□□□ 0.81
SOD1-201ENST00000270142 ERBB4Q15303 1308 aa20.1■□□□□ 0.81
SOD1-201ENST00000270142 POTEIP0CG38 1075 aa20.1■□□□□ 0.81
SOD1-201ENST00000270142 POTEJP0CG39 1038 aa20.1■□□□□ 0.81
SOD1-201ENST00000270142 ALDH1B1P30837 517 aa20.1■□□□□ 0.81
SOD1-201ENST00000270142 CRY2Q49AN0 593 aa20.1■□□□□ 0.81
SOD1-201ENST00000270142 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
SOD1-201ENST00000270142 SUSD4Q5VX71 490 aa20.09■□□□□ 0.81
SOD1-201ENST00000270142 RTKN2Q8IZC4 609 aa20.09■□□□□ 0.81
SOD1-201ENST00000270142 SNED1Q8TER0 1413 aa20.09■□□□□ 0.81
SOD1-201ENST00000270142 ZNF541Q9H0D2 1346 aa20.08■□□□□ 0.81
SOD1-201ENST00000270142 TMPOP42166 694 aaKnown RBP20.08■□□□□ 0.81
SOD1-201ENST00000270142 LRP10Q7Z4F1 713 aa20.08■□□□□ 0.81
SOD1-201ENST00000270142 ZNF34Q8IZ26 560 aa20.08■□□□□ 0.81
SOD1-201ENST00000270142 RIC1Q4ADV7 1423 aa20.08■□□□□ 0.8
SOD1-201ENST00000270142 EIF2S2P20042 333 aaKnown RBP20.07■□□□□ 0.8
SOD1-201ENST00000270142 PDIA6Q15084 440 aa20.07■□□□□ 0.8
SOD1-201ENST00000270142 CHADLQ6NUI6 762 aa20.07■□□□□ 0.8
SOD1-201ENST00000270142 GIGYF2Q6Y7W6 1299 aaKnown RBP20.07■□□□□ 0.8
SOD1-201ENST00000270142 L3MBTL3Q96JM7 780 aaPredicted RBP20.07■□□□□ 0.8
SOD1-201ENST00000270142 NTSR2O95665 410 aa20.06■□□□□ 0.8
SOD1-201ENST00000270142 IARSP41252 1262 aaKnown RBP20.06■□□□□ 0.8
SOD1-201ENST00000270142 DDX10Q13206 875 aaKnown RBP20.06■□□□□ 0.8
SOD1-201ENST00000270142 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
SOD1-201ENST00000270142 MYBBP1AQ9BQG0 1328 aaKnown RBP20.05■□□□□ 0.8
SOD1-201ENST00000270142 IQCA1LA6NCM1 817 aa20.05■□□□□ 0.8
SOD1-201ENST00000270142 ANXA1P04083 346 aa20.05■□□□□ 0.8
SOD1-201ENST00000270142 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
SOD1-201ENST00000270142 PROSER3Q2NL68 480 aa20.05■□□□□ 0.8
SOD1-201ENST00000270142 CCDC146Q8IYE0 955 aa20.05■□□□□ 0.8
SOD1-201ENST00000270142 RPGRQ92834 1020 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms