RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 TUBB2BQ9BVA1 445 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 TIAM1Q13009 1591 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 CYLC1P35663 651 aaPredicted RBP17.16■□□□□ 0.34
AFF4-201ENST00000265343 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 TSGA10Q9BZW7 698 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 VCX3BQ9H321 246 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 CDCA7LQ96GN5 454 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 LRRC27Q9C0I9 530 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 ATP5DP30049 168 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 TDRD12Q587J7 1177 aaKnown RBP17.16■□□□□ 0.34
AFF4-201ENST00000265343 KLHL10Q6JEL2 608 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 DAPK1P53355 1430 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 FMNL3Q8IVF7 1028 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 CNNM1Q9NRU3 951 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 TSNAXIP1Q2TAA8 658 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 MXRA7P84157 204 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 TBC1D2Q9BYX2 928 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 GPRASP1Q5JY77 1395 aa17.16■□□□□ 0.34
AFF4-201ENST00000265343 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.344e-12■■■■■ 42.9
AFF4-201ENST00000265343 STXBP4Q6ZWJ1 553 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 STX6O43752 255 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
AFF4-201ENST00000265343 ATRIPQ8WXE1 791 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 SSBP05455 408 aaKnown RBP eCLIP17.15■□□□□ 0.34
AFF4-201ENST00000265343 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 STMN2Q93045 179 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 LRRC45Q96CN5 670 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 ALDH3A1P30838 453 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 ALDH1L2Q3SY69 923 aa17.15■□□□□ 0.34
AFF4-201ENST00000265343 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.34
AFF4-201ENST00000265343 PPFIBP2Q8ND30 876 aa17.14■□□□□ 0.34
AFF4-201ENST00000265343 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
AFF4-201ENST00000265343 LRPPRCP42704 1394 aaKnown RBP17.14■□□□□ 0.33
AFF4-201ENST00000265343 MSH5O43196 834 aa17.14■□□□□ 0.33
AFF4-201ENST00000265343 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
AFF4-201ENST00000265343 CWC25Q9NXE8 425 aaPredicted RBP17.14■□□□□ 0.33
AFF4-201ENST00000265343 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
AFF4-201ENST00000265343 MX1P20591 662 aa17.14■□□□□ 0.33
AFF4-201ENST00000265343 CPLX4Q7Z7G2 160 aa17.14■□□□□ 0.33
AFF4-201ENST00000265343 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
AFF4-201ENST00000265343 TRIM7Q9C029 511 aa17.14■□□□□ 0.33
AFF4-201ENST00000265343 SKILP12757 684 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 ZBTB16Q05516 673 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 SPAG1Q07617 926 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
AFF4-201ENST00000265343 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 BMP15O95972 392 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 KRT86O43790 486 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 VCXQ9H320 206 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 AKAP2Q9Y2D5 859 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 VAV2P52735 878 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 RAB3IL1Q8TBN0 382 aa17.13■□□□□ 0.33
AFF4-201ENST00000265343 FSIP1Q8NA03 581 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 PLEKHO1Q53GL0 409 aaPredicted RBP17.12■□□□□ 0.33
AFF4-201ENST00000265343 ARHGAP5Q13017 1502 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 BCAR3O75815 825 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 LMBR1Q8WVP7 490 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
AFF4-201ENST00000265343 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 ZNF76P36508 570 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 KRT83P78385 493 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 TBC1D5Q92609 795 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 CFAP65Q6ZU64 1925 aaKnown RBP17.12■□□□□ 0.33
AFF4-201ENST00000265343 BMP2KLQ5H9B9 411 aa17.12■□□□□ 0.33
AFF4-201ENST00000265343 FEZ2Q9UHY8 353 aaPredicted RBP17.12■□□□□ 0.33
AFF4-201ENST00000265343 ZBTB17Q13105 803 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 MAP7D1Q3KQU3 841 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 MTIF2P46199 727 aaKnown RBP17.11■□□□□ 0.33
AFF4-201ENST00000265343 CKAP2LQ8IYA6 745 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 MACROD2A1Z1Q3 448 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 UBASH3AP57075 661 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 TBC1D32Q96NH3 1257 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 STRN4Q9NRL3 753 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 MTMR7Q9Y216 660 aa17.11■□□□□ 0.33
AFF4-201ENST00000265343 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 NUTM2DQ5VT03 806 aaPredicted RBP17.1■□□□□ 0.33
AFF4-201ENST00000265343 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 ZFP91Q96JP5 570 aaPredicted RBP17.1■□□□□ 0.33
AFF4-201ENST00000265343 CCDC38Q502W7 563 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 VPS18Q9P253 973 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 C10orf67Q8IYJ2 551 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
AFF4-201ENST00000265343 CIB2O75838 187 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 PHLDB2Q86SQ0 1253 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 CEP120Q8N960 986 aa17.1■□□□□ 0.33
AFF4-201ENST00000265343 MPHOSPH10O00566 681 aaKnown RBP17.09■□□□□ 0.33
AFF4-201ENST00000265343 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
AFF4-201ENST00000265343 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms