RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
SSBP1-201ENST00000265304 SMIM5Q71RC9 77 aa18.27■□□□□ 0.52
SSBP1-201ENST00000265304 DZIP3Q86Y13 1208 aaKnown RBP18.27■□□□□ 0.52
SSBP1-201ENST00000265304 PLBD2Q8NHP8 589 aa18.27■□□□□ 0.52
SSBP1-201ENST00000265304 PTPRCP08575 1304 aa18.26■□□□□ 0.51
SSBP1-201ENST00000265304 GYS1P13807 737 aa18.26■□□□□ 0.51
SSBP1-201ENST00000265304 RCAN3Q9UKA8 241 aa18.26■□□□□ 0.51
SSBP1-201ENST00000265304 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
SSBP1-201ENST00000265304 TCERG1O14776 1098 aaKnown RBP18.25■□□□□ 0.51
SSBP1-201ENST00000265304 TRIM28Q13263 835 aaKnown RBP18.25■□□□□ 0.51
SSBP1-201ENST00000265304 R3HDM1Q15032 1099 aaKnown RBP18.25■□□□□ 0.51
SSBP1-201ENST00000265304 KSR2Q6VAB6 950 aa18.25■□□□□ 0.51
SSBP1-201ENST00000265304 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
SSBP1-201ENST00000265304 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
SSBP1-201ENST00000265304 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
SSBP1-201ENST00000265304 KIF16BQ96L93 1317 aa18.24■□□□□ 0.51
SSBP1-201ENST00000265304 ATP10DQ9P241 1426 aa18.24■□□□□ 0.51
SSBP1-201ENST00000265304 ZPR1O75312 459 aa18.24■□□□□ 0.51
SSBP1-201ENST00000265304 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
SSBP1-201ENST00000265304 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
SSBP1-201ENST00000265304 NLGN1Q8N2Q7 840 aa18.24■□□□□ 0.51
SSBP1-201ENST00000265304 PDGFDQ9GZP0 370 aaPredicted RBP18.24■□□□□ 0.51
SSBP1-201ENST00000265304 ADCY9O60503 1353 aa18.24■□□□□ 0.51
SSBP1-201ENST00000265304 BCAR3O75815 825 aa18.23■□□□□ 0.51
SSBP1-201ENST00000265304 PHF14O94880 888 aa18.23■□□□□ 0.51
SSBP1-201ENST00000265304 TM4SF1P30408 202 aa18.23■□□□□ 0.51
SSBP1-201ENST00000265304 KIF6Q6ZMV9 814 aa18.23■□□□□ 0.51
SSBP1-201ENST00000265304 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
SSBP1-201ENST00000265304 HLFQ16534 295 aa18.22■□□□□ 0.51
SSBP1-201ENST00000265304 USPL1Q5W0Q7 1092 aa18.22■□□□□ 0.51
SSBP1-201ENST00000265304 ZNF34Q8IZ26 560 aa18.22■□□□□ 0.51
SSBP1-201ENST00000265304 NRXN2Q9P2S2 1712 aa18.22■□□□□ 0.51
SSBP1-201ENST00000265304 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
SSBP1-201ENST00000265304 TCIRG1Q13488 830 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 HSP90AB3PQ58FF7 597 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 METTL22Q9BUU2 404 aaPredicted RBP18.21■□□□□ 0.51
SSBP1-201ENST00000265304 MTFR1LQ9H019 292 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 ZNF652Q9Y2D9 606 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 RNF123Q5XPI4 1314 aa18.21■□□□□ 0.51
SSBP1-201ENST00000265304 IPO8O15397 1037 aaKnown RBP18.2■□□□□ 0.5
SSBP1-201ENST00000265304 FKBP8Q14318 412 aa18.2■□□□□ 0.5
SSBP1-201ENST00000265304 SGIP1Q9BQI5 828 aa18.2■□□□□ 0.5
SSBP1-201ENST00000265304 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
SSBP1-201ENST00000265304 NOB1Q9ULX3 412 aaKnown RBP18.2■□□□□ 0.5
SSBP1-201ENST00000265304 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
SSBP1-201ENST00000265304 FKBP5Q13451 457 aaPredicted RBP18.19■□□□□ 0.5
SSBP1-201ENST00000265304 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
SSBP1-201ENST00000265304 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
SSBP1-201ENST00000265304 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
SSBP1-201ENST00000265304 PXDNLA1KZ92 1463 aa18.19■□□□□ 0.5
SSBP1-201ENST00000265304 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
SSBP1-201ENST00000265304 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
SSBP1-201ENST00000265304 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
SSBP1-201ENST00000265304 MAP3K2Q9Y2U5 619 aa18.18■□□□□ 0.5
SSBP1-201ENST00000265304 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
SSBP1-201ENST00000265304 NFIXQ14938 502 aa18.17■□□□□ 0.5
SSBP1-201ENST00000265304 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
SSBP1-201ENST00000265304 IGKV5-2P06315 115 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 TRIM27P14373 513 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 PARP10Q53GL7 1025 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 BEND3Q5T5X7 828 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 ZKSCAN2Q63HK3 967 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 ABCC4O15439 1325 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 KIF13BQ9NQT8 1826 aa18.16■□□□□ 0.5
SSBP1-201ENST00000265304 PTGER2P43116 358 aa18.15■□□□□ 0.5
SSBP1-201ENST00000265304 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
SSBP1-201ENST00000265304 NLRP10Q86W26 655 aa18.15■□□□□ 0.5
SSBP1-201ENST00000265304 F6X3S4 739 aa18.14■□□□□ 0.49
SSBP1-201ENST00000265304 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
SSBP1-201ENST00000265304 ALDH1L1O75891 902 aa18.14■□□□□ 0.49
SSBP1-201ENST00000265304 DDR1Q08345 913 aa18.14■□□□□ 0.49
SSBP1-201ENST00000265304 SETDB2Q96T68 719 aa18.14■□□□□ 0.49
SSBP1-201ENST00000265304 UBN2Q6ZU65 1347 aa18.14■□□□□ 0.49
SSBP1-201ENST00000265304 CARMIL3Q8ND23 1372 aa18.14■□□□□ 0.49
SSBP1-201ENST00000265304 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
SSBP1-201ENST00000265304 ARXQ96QS3 562 aa18.13■□□□□ 0.49
SSBP1-201ENST00000265304 NIP7Q9Y221 180 aaKnown RBP eCLIP18.13■□□□□ 0.49
SSBP1-201ENST00000265304 NEURL1BA8MQ27 555 aa18.12■□□□□ 0.49
SSBP1-201ENST00000265304 MMP10P09238 476 aa18.12■□□□□ 0.49
SSBP1-201ENST00000265304 MS4A1P11836 297 aa18.12■□□□□ 0.49
SSBP1-201ENST00000265304 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
SSBP1-201ENST00000265304 UTYO14607 1347 aa18.12■□□□□ 0.49
SSBP1-201ENST00000265304 RIC1Q4ADV7 1423 aa18.12■□□□□ 0.49
SSBP1-201ENST00000265304 ZBTB7AO95365 584 aa18.11■□□□□ 0.49
SSBP1-201ENST00000265304 CCT4P50991 539 aaKnown RBP18.11■□□□□ 0.49
SSBP1-201ENST00000265304 SLC10A5Q5PT55 438 aa18.11■□□□□ 0.49
SSBP1-201ENST00000265304 MYD88Q99836 296 aa18.11■□□□□ 0.49
SSBP1-201ENST00000265304 SPON1Q9HCB6 807 aa18.11■□□□□ 0.49
SSBP1-201ENST00000265304 H7C1W4 665 aa18.1■□□□□ 0.49
SSBP1-201ENST00000265304 NTSR2O95665 410 aa18.1■□□□□ 0.49
SSBP1-201ENST00000265304 GCKRQ14397 625 aa18.1■□□□□ 0.49
SSBP1-201ENST00000265304 SUSD4Q5VX71 490 aa18.1■□□□□ 0.49
SSBP1-201ENST00000265304 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.1■□□□□ 0.49
SSBP1-201ENST00000265304 SRCIN1Q9C0H9 1055 aa18.1■□□□□ 0.49
SSBP1-201ENST00000265304 ANKRD31Q8N7Z5 1873 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms