RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 MTX1Q13505 466 aa20.18■□□□□ 0.82
PDE4C-201ENST00000262805 TPRNQ4KMQ1 711 aa20.18■□□□□ 0.82
PDE4C-201ENST00000262805 WDR33Q9C0J8 1336 aaKnown RBP20.18■□□□□ 0.82
PDE4C-201ENST00000262805 ADCK5Q3MIX3 580 aa20.18■□□□□ 0.82
PDE4C-201ENST00000262805 GLRX3O76003 335 aaKnown RBP20.17■□□□□ 0.82
PDE4C-201ENST00000262805 HSP90AB4PQ58FF6 505 aa20.17■□□□□ 0.82
PDE4C-201ENST00000262805 KIAA1211Q6ZU35 1233 aa20.17■□□□□ 0.82
PDE4C-201ENST00000262805 DDX54Q8TDD1 881 aaKnown RBP20.17■□□□□ 0.82
PDE4C-201ENST00000262805 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
PDE4C-201ENST00000262805 PHRF1Q9P1Y6 1649 aaKnown RBP20.17■□□□□ 0.82
PDE4C-201ENST00000262805 PRKCSHP14314 528 aaPredicted RBP20.17■□□□□ 0.82
PDE4C-201ENST00000262805 CASTP20810 708 aaKnown RBP20.17■□□□□ 0.82
PDE4C-201ENST00000262805 MSNP26038 577 aaKnown RBP20.17■□□□□ 0.82
PDE4C-201ENST00000262805 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
PDE4C-201ENST00000262805 CLASRPQ8N2M8 674 aaKnown RBP20.17■□□□□ 0.82
PDE4C-201ENST00000262805 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
PDE4C-201ENST00000262805 AXIN2Q9Y2T1 843 aa20.17■□□□□ 0.82
PDE4C-201ENST00000262805 LMOD2Q6P5Q4 547 aa20.16■□□□□ 0.82
PDE4C-201ENST00000262805 KSR2Q6VAB6 950 aa20.16■□□□□ 0.82
PDE4C-201ENST00000262805 ARHGEF25Q86VW2 580 aa20.16■□□□□ 0.82
PDE4C-201ENST00000262805 KAZALD1Q96I82 304 aa20.16■□□□□ 0.82
PDE4C-201ENST00000262805 DIAPH3Q9NSV4 1193 aa20.16■□□□□ 0.82
PDE4C-201ENST00000262805 ANKRD24Q8TF21 1146 aa20.16■□□□□ 0.82
PDE4C-201ENST00000262805 ADGRL3Q9HAR2 1447 aa20.16■□□□□ 0.82
PDE4C-201ENST00000262805 HEG1Q9ULI3 1381 aa20.15■□□□□ 0.82
PDE4C-201ENST00000262805 COL9A3Q14050 684 aaPredicted RBP20.15■□□□□ 0.82
PDE4C-201ENST00000262805 LIMCH1Q9UPQ0 1083 aa20.15■□□□□ 0.82
PDE4C-201ENST00000262805 AIMP1Q12904 312 aaKnown RBP20.15■□□□□ 0.82
PDE4C-201ENST00000262805 PRPF40BQ6NWY9 871 aaKnown RBP20.15■□□□□ 0.82
PDE4C-201ENST00000262805 SUCLG2Q96I99 432 aa20.15■□□□□ 0.82
PDE4C-201ENST00000262805 ECHDC1Q9NTX5 307 aa20.15■□□□□ 0.82
PDE4C-201ENST00000262805 NOL7Q9UMY1 257 aaKnown RBP20.15■□□□□ 0.82
PDE4C-201ENST00000262805 SYT1P21579 422 aa20.14■□□□□ 0.82
PDE4C-201ENST00000262805 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.82
PDE4C-201ENST00000262805 AACSQ86V21 672 aa20.14■□□□□ 0.81
PDE4C-201ENST00000262805 HYPKQ9NX55 129 aa20.14■□□□□ 0.81
PDE4C-201ENST00000262805 ALDH1L1O75891 902 aa20.13■□□□□ 0.81
PDE4C-201ENST00000262805 IFIT2P09913 472 aaKnown RBP20.13■□□□□ 0.81
PDE4C-201ENST00000262805 ZSCAN22P10073 491 aaPredicted RBP20.13■□□□□ 0.81
PDE4C-201ENST00000262805 HSPA2P54652 639 aa20.13■□□□□ 0.81
PDE4C-201ENST00000262805 HS1BP3Q53T59 392 aa20.13■□□□□ 0.81
PDE4C-201ENST00000262805 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
PDE4C-201ENST00000262805 NCAPD2Q15021 1401 aa20.13■□□□□ 0.81
PDE4C-201ENST00000262805 SASH1O94885 1247 aa20.13■□□□□ 0.81
PDE4C-201ENST00000262805 JAKMIP1Q96N16 626 aaKnown RBP20.13■□□□□ 0.81
PDE4C-201ENST00000262805 BICC1Q9H694 974 aaKnown RBP20.13■□□□□ 0.81
PDE4C-201ENST00000262805 TLR7Q9NYK1 1049 aaKnown RBP20.13■□□□□ 0.81
PDE4C-201ENST00000262805 STX6O43752 255 aa20.12■□□□□ 0.81
PDE4C-201ENST00000262805 CCDC83Q8IWF9 413 aa20.12■□□□□ 0.81
PDE4C-201ENST00000262805 FAM227BQ96M60 508 aa20.12■□□□□ 0.81
PDE4C-201ENST00000262805 SIPA1L3O60292 1781 aaPredicted RBP20.12■□□□□ 0.81
PDE4C-201ENST00000262805 OFD1O75665 1012 aa20.12■□□□□ 0.81
PDE4C-201ENST00000262805 ST3GAL1Q11201 340 aa20.12■□□□□ 0.81
PDE4C-201ENST00000262805 EAF2Q96CJ1 260 aaPredicted RBP20.12■□□□□ 0.81
PDE4C-201ENST00000262805 RGPD5Q99666 1765 aa20.12■□□□□ 0.81
PDE4C-201ENST00000262805 NPHP4O75161 1426 aaPredicted RBP20.11■□□□□ 0.81
PDE4C-201ENST00000262805 PDIA6Q15084 440 aa20.11■□□□□ 0.81
PDE4C-201ENST00000262805 KLHDC4Q8TBB5 520 aa20.11■□□□□ 0.81
PDE4C-201ENST00000262805 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
PDE4C-201ENST00000262805 CCDC8Q9H0W5 538 aaPredicted RBP20.11■□□□□ 0.81
PDE4C-201ENST00000262805 GRM8O00222 908 aa20.11■□□□□ 0.81
PDE4C-201ENST00000262805 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
PDE4C-201ENST00000262805 SMC3Q9UQE7 1217 aa20.11■□□□□ 0.81
PDE4C-201ENST00000262805 TMEM87AQ8NBN3 555 aa20.1■□□□□ 0.81
PDE4C-201ENST00000262805 SIL1Q9H173 461 aa20.1■□□□□ 0.81
PDE4C-201ENST00000262805 SLIT3O75094 1523 aa20.1■□□□□ 0.81
PDE4C-201ENST00000262805 LINS1Q8NG48 757 aa20.1■□□□□ 0.81
PDE4C-201ENST00000262805 SYAP1Q96A49 352 aaPredicted RBP20.1■□□□□ 0.81
PDE4C-201ENST00000262805 PDRG1Q9NUG6 133 aa20.1■□□□□ 0.81
PDE4C-201ENST00000262805 F13A1P00488 732 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 CCDC171Q6TFL3 1326 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 FIBPO43427 364 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 GJB2P29033 226 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 NECTIN1Q15223 517 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 ZKSCAN5Q9Y2L8 839 aa20.09■□□□□ 0.81
PDE4C-201ENST00000262805 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
PDE4C-201ENST00000262805 NMIQ13287 307 aaPredicted RBP20.08■□□□□ 0.81
PDE4C-201ENST00000262805 ERC1Q8IUD2 1116 aa20.08■□□□□ 0.81
PDE4C-201ENST00000262805 EVI5LQ96CN4 794 aa20.08■□□□□ 0.81
PDE4C-201ENST00000262805 ZSWIM6Q9HCJ5 1215 aa20.08■□□□□ 0.81
PDE4C-201ENST00000262805 NECAB1Q8N987 351 aa20.08■□□□□ 0.8
PDE4C-201ENST00000262805 GPATCH3Q96I76 525 aa20.08■□□□□ 0.8
PDE4C-201ENST00000262805 RBM8AQ9Y5S9 174 aaKnown RBP20.08■□□□□ 0.8
PDE4C-201ENST00000262805 OVOS2A0A0G2JMS6 1433 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 ZNF500O60304 480 aaPredicted RBP20.07■□□□□ 0.8
PDE4C-201ENST00000262805 ME3Q16798 604 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 VPS53Q5VIR6 699 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 KCNB2Q92953 911 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
PDE4C-201ENST00000262805 TAF6LQ9Y6J9 622 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 UTYO14607 1347 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 C5P01031 1676 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 MYL6BP14649 208 aa20.07■□□□□ 0.8
PDE4C-201ENST00000262805 CAMTA1Q9Y6Y1 1673 aa20.06■□□□□ 0.8
PDE4C-201ENST00000262805 MPNDQ8N594 471 aa20.06■□□□□ 0.8
PDE4C-201ENST00000262805 BOLA2Q9H3K6 86 aa20.06■□□□□ 0.8
PDE4C-201ENST00000262805 MTMR6Q9Y217 621 aa20.06■□□□□ 0.8
PDE4C-201ENST00000262805 CYP46A1Q9Y6A2 500 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms