RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 XRN1Q8IZH2 1706 aaKnown RBP21.53■■□□□ 1.04
TRAF4-201ENST00000262395 AOX1Q06278 1338 aa21.53■■□□□ 1.04
TRAF4-201ENST00000262395 POLA2Q14181 598 aa21.52■■□□□ 1.04
TRAF4-201ENST00000262395 IL17RAQ96F46 866 aa21.52■■□□□ 1.04
TRAF4-201ENST00000262395 MTMR6Q9Y217 621 aa21.52■■□□□ 1.03
TRAF4-201ENST00000262395 ZNF710Q8N1W2 664 aa21.51■■□□□ 1.03
TRAF4-201ENST00000262395 LGR6Q9HBX8 967 aa21.51■■□□□ 1.03
TRAF4-201ENST00000262395 PYCARDQ9ULZ3 195 aa21.51■■□□□ 1.03
TRAF4-201ENST00000262395 HOXC9P31274 260 aa21.5■■□□□ 1.03
TRAF4-201ENST00000262395 MAP3K5Q99683 1374 aa21.5■■□□□ 1.03
TRAF4-201ENST00000262395 KCNJ4P48050 445 aa21.49■■□□□ 1.03
TRAF4-201ENST00000262395 AMOTL2Q9Y2J4 779 aa21.49■■□□□ 1.03
TRAF4-201ENST00000262395 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
TRAF4-201ENST00000262395 ST3GAL1Q11201 340 aa21.49■■□□□ 1.03
TRAF4-201ENST00000262395 ME3Q16798 604 aa21.49■■□□□ 1.03
TRAF4-201ENST00000262395 FAM208AQ9UK61 1670 aaKnown RBP21.49■■□□□ 1.03
TRAF4-201ENST00000262395 KCNF1Q9H3M0 494 aa21.49■■□□□ 1.03
TRAF4-201ENST00000262395 ADAMTS13Q76LX8 1427 aa21.48■■□□□ 1.03
TRAF4-201ENST00000262395 LETM1O95202 739 aaPredicted RBP21.48■■□□□ 1.03
TRAF4-201ENST00000262395 DNAAF4Q8WXU2 420 aa21.48■■□□□ 1.03
TRAF4-201ENST00000262395 FUCA2Q9BTY2 467 aa21.48■■□□□ 1.03
TRAF4-201ENST00000262395 HTATSF1O43719 755 aaKnown RBP21.48■■□□□ 1.03
TRAF4-201ENST00000262395 ATP6V1DQ9Y5K8 247 aa21.48■■□□□ 1.03
TRAF4-201ENST00000262395 BEND3Q5T5X7 828 aa21.47■■□□□ 1.03
TRAF4-201ENST00000262395 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
TRAF4-201ENST00000262395 CEBPAP49715 358 aaPredicted RBP21.47■■□□□ 1.03
TRAF4-201ENST00000262395 CKAP2LQ8IYA6 745 aa21.47■■□□□ 1.03
TRAF4-201ENST00000262395 FAM227BQ96M60 508 aa21.47■■□□□ 1.03
TRAF4-201ENST00000262395 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
TRAF4-201ENST00000262395 TNRQ92752 1358 aa21.46■■□□□ 1.03
TRAF4-201ENST00000262395 CBX1P83916 185 aa21.46■■□□□ 1.03
TRAF4-201ENST00000262395 TFIP11Q9UBB9 837 aaKnown RBP21.46■■□□□ 1.03
TRAF4-201ENST00000262395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.46■■□□□ 1.03
TRAF4-201ENST00000262395 GLRX3O76003 335 aaKnown RBP21.45■■□□□ 1.03
TRAF4-201ENST00000262395 LIG1P18858 919 aa21.45■■□□□ 1.03
TRAF4-201ENST00000262395 MTERF4Q7Z6M4 381 aaKnown RBP21.45■■□□□ 1.03
TRAF4-201ENST00000262395 CLASRPQ8N2M8 674 aaKnown RBP21.45■■□□□ 1.03
TRAF4-201ENST00000262395 TPCN1Q9ULQ1 816 aa21.45■■□□□ 1.03
TRAF4-201ENST00000262395 NALCNQ8IZF0 1738 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 LARP1BQ659C4 914 aaKnown RBP21.45■■□□□ 1.02
TRAF4-201ENST00000262395 CDC37L1Q7L3B6 337 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 ABTB2Q8N961 1025 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 BCL11BQ9C0K0 894 aaPredicted RBP21.45■■□□□ 1.02
TRAF4-201ENST00000262395 PTPRUQ92729 1446 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 STK3Q13188 491 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 TTC6Q86TZ1 520 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 LUZP1Q86V48 1076 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 PRIMPOLQ96LW4 560 aa21.45■■□□□ 1.02
TRAF4-201ENST00000262395 FMN2Q9NZ56 1722 aa21.44■■□□□ 1.02
TRAF4-201ENST00000262395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.44■■□□□ 1.02
TRAF4-201ENST00000262395 IFIT2P09913 472 aaKnown RBP21.44■■□□□ 1.02
TRAF4-201ENST00000262395 CCDC94Q9BW85 323 aaPredicted RBP21.44■■□□□ 1.02
TRAF4-201ENST00000262395 TAF6LQ9Y6J9 622 aa21.44■■□□□ 1.02
TRAF4-201ENST00000262395 CWF19L2Q2TBE0 894 aaKnown RBP21.44■■□□□ 1.02
TRAF4-201ENST00000262395 AACSQ86V21 672 aa21.44■■□□□ 1.02
TRAF4-201ENST00000262395 KIF3AQ9Y496 699 aa21.44■■□□□ 1.02
TRAF4-201ENST00000262395 EIF4A1P60842 406 aaKnown RBP21.43■■□□□ 1.02
TRAF4-201ENST00000262395 CCDC8Q9H0W5 538 aaPredicted RBP21.43■■□□□ 1.02
TRAF4-201ENST00000262395 C9orf78Q9NZ63 289 aaPredicted RBP21.43■■□□□ 1.02
TRAF4-201ENST00000262395 RBM8AQ9Y5S9 174 aaKnown RBP21.43■■□□□ 1.02
TRAF4-201ENST00000262395 SETD1BQ9UPS6 1966 aaKnown RBP21.43■■□□□ 1.02
TRAF4-201ENST00000262395 VPS53Q5VIR6 699 aa21.43■■□□□ 1.02
TRAF4-201ENST00000262395 ZHX1Q9UKY1 873 aaPredicted RBP21.43■■□□□ 1.02
TRAF4-201ENST00000262395 EPB41L2O43491 1005 aaKnown RBP21.42■■□□□ 1.02
TRAF4-201ENST00000262395 PTGS1P23219 599 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 RUFY2Q8WXA3 655 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 BCL2L12Q9HB09 334 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 ZSWIM6Q9HCJ5 1215 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 ECHDC1Q9NTX5 307 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 AGLP35573 1532 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 HMGN5P82970 282 aaKnown RBP21.42■■□□□ 1.02
TRAF4-201ENST00000262395 KIAA1524Q8TCG1 905 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 SPTLC3Q9NUV7 552 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 CCDC192P0DO97 292 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 PPP4R3BQ5MIZ7 849 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 MPRIPQ6WCQ1 1025 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 SIL1Q9H173 461 aa21.42■■□□□ 1.02
TRAF4-201ENST00000262395 CREB3L3Q68CJ9 461 aa21.41■■□□□ 1.02
TRAF4-201ENST00000262395 SPDYE4A6NLX3 237 aa21.41■■□□□ 1.02
TRAF4-201ENST00000262395 RIOK3O14730 519 aaKnown RBP21.41■■□□□ 1.02
TRAF4-201ENST00000262395 NMIQ13287 307 aaPredicted RBP21.41■■□□□ 1.02
TRAF4-201ENST00000262395 PROSER3Q2NL68 480 aa21.41■■□□□ 1.02
TRAF4-201ENST00000262395 PRAMEF22A3QJZ6 481 aa21.4■■□□□ 1.02
TRAF4-201ENST00000262395 ZKSCAN1P17029 563 aaPredicted RBP21.4■■□□□ 1.02
TRAF4-201ENST00000262395 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
TRAF4-201ENST00000262395 TOPAZ1Q8N9V7 1692 aa21.4■■□□□ 1.02
TRAF4-201ENST00000262395 TLR7Q9NYK1 1049 aaKnown RBP21.4■■□□□ 1.02
TRAF4-201ENST00000262395 CCDC171Q6TFL3 1326 aa21.4■■□□□ 1.02
TRAF4-201ENST00000262395 LRMPQ12912 555 aa21.39■■□□□ 1.02
TRAF4-201ENST00000262395 NECTIN1Q15223 517 aa21.39■■□□□ 1.02
TRAF4-201ENST00000262395 HSP90AB4PQ58FF6 505 aa21.39■■□□□ 1.02
TRAF4-201ENST00000262395 DRC7Q8IY82 874 aa21.39■■□□□ 1.02
TRAF4-201ENST00000262395 DACT1Q9NYF0 836 aa21.39■■□□□ 1.02
TRAF4-201ENST00000262395 NRBP1Q9UHY1 535 aa21.39■■□□□ 1.02
TRAF4-201ENST00000262395 RGPD8O14715 1765 aaPredicted RBP21.39■■□□□ 1.01
TRAF4-201ENST00000262395 ATP2B3Q16720 1220 aa21.39■■□□□ 1.01
TRAF4-201ENST00000262395 NUP62CLQ9H1M0 184 aa21.39■■□□□ 1.01
TRAF4-201ENST00000262395 BOLA2Q9H3K6 86 aa21.39■■□□□ 1.01
TRAF4-201ENST00000262395 TTC41PQ6P2S7 1318 aa21.39■■□□□ 1.01
TRAF4-201ENST00000262395 RBM33Q96EV2 1170 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms