RNA–Protein interactions for RNA: ENST00000261203.7

LIN7A-201, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 989 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-201ENST00000261203 C2CD5Q86YS7 1000 aa12.2□□□□□ -0.46
LIN7A-201ENST00000261203 TTLL6Q8N841 843 aa12.2□□□□□ -0.46
LIN7A-201ENST00000261203 BRIP1Q9BX63 1249 aa12.2□□□□□ -0.46
LIN7A-201ENST00000261203 MIS18AQ9NYP9 233 aa12.2□□□□□ -0.46
LIN7A-201ENST00000261203 CCDC88AQ3V6T2 1871 aa12.2□□□□□ -0.46
LIN7A-201ENST00000261203 COL11A2P13942 1736 aaPredicted RBP12.2□□□□□ -0.46
LIN7A-201ENST00000261203 TOMM70O94826 608 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
LIN7A-201ENST00000261203 ST5P78524 1137 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 C9orf131Q5VYM1 1079 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 CNBD1Q8NA66 436 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 ARFGEF2Q9Y6D5 1785 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
LIN7A-201ENST00000261203 NUP98P52948 1817 aa12.18□□□□□ -0.46
LIN7A-201ENST00000261203 NBPF26B4DH59 902 aa12.18□□□□□ -0.46
LIN7A-201ENST00000261203 EIF4A1P60842 406 aaKnown RBP12.18□□□□□ -0.46
LIN7A-201ENST00000261203 NBPF10Q6P3W6 841 aaKnown RBP12.18□□□□□ -0.46
LIN7A-201ENST00000261203 NBPF15Q8N660 670 aa12.18□□□□□ -0.46
LIN7A-201ENST00000261203 RIPK4P57078 832 aa12.17□□□□□ -0.46
LIN7A-201ENST00000261203 THUMPD2Q9BTF0 503 aaKnown RBP12.17□□□□□ -0.46
LIN7A-201ENST00000261203 BABAM1Q9NWV8 329 aa12.17□□□□□ -0.46
LIN7A-201ENST00000261203 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
LIN7A-201ENST00000261203 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
LIN7A-201ENST00000261203 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
LIN7A-201ENST00000261203 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
LIN7A-201ENST00000261203 DICER1Q9UPY3 1922 aaKnown RBP12.16□□□□□ -0.46
LIN7A-201ENST00000261203 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
LIN7A-201ENST00000261203 WDR43Q15061 677 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIN7A-201ENST00000261203 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
LIN7A-201ENST00000261203 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
LIN7A-201ENST00000261203 ERBB4Q15303 1308 aa12.15□□□□□ -0.46
LIN7A-201ENST00000261203 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
LIN7A-201ENST00000261203 TIAM2Q8IVF5 1701 aa12.15□□□□□ -0.46
LIN7A-201ENST00000261203 LMNB1P20700 586 aa12.15□□□□□ -0.46
LIN7A-201ENST00000261203 STYK1Q6J9G0 422 aa12.15□□□□□ -0.46
LIN7A-201ENST00000261203 ZNF622Q969S3 477 aaKnown RBP eCLIP12.15□□□□□ -0.46
LIN7A-201ENST00000261203 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
LIN7A-201ENST00000261203 SLX4Q8IY92 1834 aa12.15□□□□□ -0.46
LIN7A-201ENST00000261203 ERVV-1B6SEH8 477 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 TPTE2Q6XPS3 522 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 CNKSR1Q969H4 720 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 RUNDC1Q96C34 613 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
LIN7A-201ENST00000261203 PCNTO95613 3336 aa12.14□□□□□ -0.47
LIN7A-201ENST00000261203 SRGNP10124 158 aa12.13□□□□□ -0.47
LIN7A-201ENST00000261203 RASSF7Q02833 373 aa12.13□□□□□ -0.47
LIN7A-201ENST00000261203 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
LIN7A-201ENST00000261203 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
LIN7A-201ENST00000261203 RRP7AQ9Y3A4 280 aaKnown RBP12.13□□□□□ -0.47
LIN7A-201ENST00000261203 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
LIN7A-201ENST00000261203 HLFQ16534 295 aa12.12□□□□□ -0.47
LIN7A-201ENST00000261203 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
LIN7A-201ENST00000261203 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
LIN7A-201ENST00000261203 NYXQ9GZU5 481 aa12.12□□□□□ -0.47
LIN7A-201ENST00000261203 NMRK2Q9NPI5 230 aa12.12□□□□□ -0.47
LIN7A-201ENST00000261203 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 IBTKQ9P2D0 1353 aaPredicted RBP12.11□□□□□ -0.47
LIN7A-201ENST00000261203 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
LIN7A-201ENST00000261203 NFKBIEO00221 500 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 C21orf2O43822 256 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 MYL6BP14649 208 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 NPR1P16066 1061 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
LIN7A-201ENST00000261203 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
LIN7A-201ENST00000261203 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 COL13A1Q5TAT6 717 aaPredicted RBP12.11□□□□□ -0.47
LIN7A-201ENST00000261203 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
LIN7A-201ENST00000261203 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
LIN7A-201ENST00000261203 NGEFQ8N5V2 710 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 KLRG1Q96E93 195 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 ADAMTS8Q9UP79 889 aa12.11□□□□□ -0.47
LIN7A-201ENST00000261203 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
LIN7A-201ENST00000261203 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
LIN7A-201ENST00000261203 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
LIN7A-201ENST00000261203 RIC1Q4ADV7 1423 aa12.1□□□□□ -0.47
LIN7A-201ENST00000261203 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
LIN7A-201ENST00000261203 CHL1O00533 1208 aa12.09□□□□□ -0.47
LIN7A-201ENST00000261203 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
LIN7A-201ENST00000261203 PRELPP51888 382 aa12.09□□□□□ -0.47
LIN7A-201ENST00000261203 FSTL1Q12841 308 aa12.09□□□□□ -0.47
LIN7A-201ENST00000261203 GIGYF2Q6Y7W6 1299 aaKnown RBP12.09□□□□□ -0.47
LIN7A-201ENST00000261203 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
LIN7A-201ENST00000261203 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
LIN7A-201ENST00000261203 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
LIN7A-201ENST00000261203 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
LIN7A-201ENST00000261203 GLTPD2A6NH11 291 aa12.08□□□□□ -0.48
LIN7A-201ENST00000261203 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
LIN7A-201ENST00000261203 ALDH1B1P30837 517 aa12.08□□□□□ -0.48
LIN7A-201ENST00000261203 PDIA6Q15084 440 aa12.08□□□□□ -0.48
LIN7A-201ENST00000261203 CCDC93Q567U6 631 aa12.08□□□□□ -0.48
LIN7A-201ENST00000261203 RRAGCQ9HB90 399 aa12.08□□□□□ -0.48
LIN7A-201ENST00000261203 HOXB7P09629 217 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 GPTP24298 496 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 HTRA3P83110 453 aa12.07□□□□□ -0.48
LIN7A-201ENST00000261203 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms